Literature DB >> 23546780

Microsatellites: evolution and contribution.

Panagiotis Madesis1, Ioannis Ganopoulos, Athanasios Tsaftaris.   

Abstract

Microsatellites are codominant molecular genetic markers, which are universally dispersed within genomes. These markers are highly popular because of their high level of polymorphism, relatively small size, and rapid detection protocols. They are widely used in a variety of fundamental and applied fields of biological sciences for plants and animal studies. Microsatellites are also extensively used in the field of agriculture, where they are used in characterizing genetic materials, plant selection, constructing dense linkage maps, mapping economically important quantitative traits, identifying genes responsible for these traits. In addition microsatellites are used for marker-assisted selection in breeding programs, thus speeding up the process. In this chapter, genomic distribution, evolution, and practical applications of microsatellites are considered, with special emphasis on plant breeding and agriculture. Moreover, novel advances in microsatellite technologies are also discussed.

Mesh:

Substances:

Year:  2013        PMID: 23546780     DOI: 10.1007/978-1-62703-389-3_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  SA-SSR: a suffix array-based algorithm for exhaustive and efficient SSR discovery in large genetic sequences.

Authors:  B D Pickett; S M Karlinsey; C E Penrod; M J Cormier; M T W Ebbert; D K Shiozawa; C J Whipple; P G Ridge
Journal:  Bioinformatics       Date:  2016-05-11       Impact factor: 6.937

2.  Identification and Characterization of Microsatellite Markers Derived from the Whole Genome Analysis of Taenia solium.

Authors:  Mónica J Pajuelo; María Eguiluz; Eric Dahlstrom; David Requena; Frank Guzmán; Manuel Ramirez; Patricia Sheen; Michael Frace; Scott Sammons; Vitaliano Cama; Sarah Anzick; Dan Bruno; Siddhartha Mahanty; Patricia Wilkins; Theodore Nash; Armando Gonzalez; Héctor H García; Robert H Gilman; Steve Porcella; Mirko Zimic
Journal:  PLoS Negl Trop Dis       Date:  2015-12-23

Review 3.  Role of microsatellites in genetic analysis of Bombyx mori silkworm: a review.

Authors:  Julian David Trochez-Solarte; Ximena Ruiz-Erazo; Martha Almanza-Pinzon; Giselle Zambrano-Gonzalez
Journal:  F1000Res       Date:  2019-08-13

4.  SNP barcodes provide higher resolution than microsatellite markers to measure Plasmodium vivax population genetics.

Authors:  Abebe A Fola; Eline Kattenberg; Zahra Razook; Dulcie Lautu-Gumal; Stuart Lee; Somya Mehra; Melanie Bahlo; James Kazura; Leanne J Robinson; Moses Laman; Ivo Mueller; Alyssa E Barry
Journal:  Malar J       Date:  2020-10-20       Impact factor: 2.979

5.  BigFiRSt: A Software Program Using Big Data Technique for Mining Simple Sequence Repeats From Large-Scale Sequencing Data.

Authors:  Jinxiang Chen; Fuyi Li; Miao Wang; Junlong Li; Tatiana T Marquez-Lago; André Leier; Jerico Revote; Shuqin Li; Quanzhong Liu; Jiangning Song
Journal:  Front Big Data       Date:  2022-01-18
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.