Literature DB >> 23543815

The Distribution of Family Sizes Under a Time-Homogeneous Birth and Death Process.

Panagis Moschopoulos1, Max Shpak.   

Abstract

The number of extant individuals within a lineage, as exemplified by counts of species numbers across genera in a higher taxonomic category, is known to be a highly skewed distribution. Because the sublineages (such as genera in a clade) themselves follow a random birth process, deriving the distribution of lineage sizes involves averaging the solutions to a birth and death process over the distribution of time intervals separating the origin of the lineages. In this article, we show that the resulting distributions can be represented by hypergeometric functions of the second kind. We also provide approximations of these distributions up to the second order, and compare these results to the asymptotic distributions and numerical approximations used in previous studies. For two limiting cases, one with a relatively high rate of lineage origin, one with a low rate, the cumulative probability densities and percentiles are compared to show that the approximations are robust over a wide range of parameters. It is proposed that the probability distributions of lineage size may have a number of relevant applications to biological problems such as the coalescence of genetic lineages and in predicting the number of species in living and extinct higher taxa, as these systems are special instances of the underlying process analyzed in this article.

Entities:  

Keywords:  Birth-death process; Genealogy; Hypergeometric function; Phylogeny; Taxon size

Year:  2010        PMID: 23543815      PMCID: PMC3609435          DOI: 10.1080/03610920902898498

Source DB:  PubMed          Journal:  Commun Stat Theory Methods        ISSN: 0361-0926            Impact factor:   0.893


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Authors:  S Anderson
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5.  The reconstructed evolutionary process.

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6.  Molecules as documents of evolutionary history.

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