Literature DB >> 23541505

Advances in metabolic pathway and strain engineering paving the way for sustainable production of chemical building blocks.

Yun Chen1, Jens Nielsen.   

Abstract

Bio-based production of chemical building blocks from renewable resources is an attractive alternative to petroleum-based platform chemicals. Metabolic pathway and strain engineering is the key element in constructing robust microbial chemical factories within the constraints of cost effective production. Here we discuss how the development of computational algorithms, novel modules and methods, omics-based techniques combined with modeling refinement are enabling reduction in development time and thus advance the field of industrial biotechnology. We further discuss how recent technological developments contribute to the development of novel cell factories for the production of the building block chemicals: adipic acid, succinic acid and 3-hydroxypropionic acid.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23541505     DOI: 10.1016/j.copbio.2013.03.008

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   10.279


  36 in total

1.  Rational engineering of multiple module pathways for the production of L-phenylalanine in Corynebacterium glutamicum.

Authors:  Chuanzhi Zhang; Junli Zhang; Zhen Kang; Guocheng Du; Jian Chen
Journal:  J Ind Microbiol Biotechnol       Date:  2015-02-10       Impact factor: 3.346

2.  A New Player in the Biorefineries Field: Phasin PhaP Enhances Tolerance to Solvents and Boosts Ethanol and 1,3-Propanediol Synthesis in Escherichia coli.

Authors:  Mariela P Mezzina; Daniela S Álvarez; Diego E Egoburo; Rocío Díaz Peña; Pablo I Nikel; M Julia Pettinari
Journal:  Appl Environ Microbiol       Date:  2017-06-30       Impact factor: 4.792

Review 3.  Using non-enzymatic chemistry to influence microbial metabolism.

Authors:  Stephen Wallace; Erica E Schultz; Emily P Balskus
Journal:  Curr Opin Chem Biol       Date:  2015-01-08       Impact factor: 8.822

4.  In silico model-driven cofactor engineering strategies for improving the overall NADP(H) turnover in microbial cell factories.

Authors:  Meiyappan Lakshmanan; Kai Yu; Lokanand Koduru; Dong-Yup Lee
Journal:  J Ind Microbiol Biotechnol       Date:  2015-08-08       Impact factor: 3.346

Review 5.  Opportunities for merging chemical and biological synthesis.

Authors:  Stephen Wallace; Emily P Balskus
Journal:  Curr Opin Biotechnol       Date:  2014-04-18       Impact factor: 9.740

6.  Identification of Genes Conferring Tolerance to Lignocellulose-Derived Inhibitors by Functional Selections in Soil Metagenomes.

Authors:  Kevin J Forsberg; Sanket Patel; Evan Witt; Bin Wang; Tyler D Ellison; Gautam Dantas
Journal:  Appl Environ Microbiol       Date:  2015-11-06       Impact factor: 4.792

7.  Agent-based spatiotemporal simulation of biomolecular systems within the open source MASON framework.

Authors:  Gael Pérez-Rodríguez; Martín Pérez-Pérez; Daniel Glez-Peña; Florentino Fdez-Riverola; Nuno F Azevedo; Anália Lourenço
Journal:  Biomed Res Int       Date:  2015-03-22       Impact factor: 3.411

8.  Engineering catechol 1, 2-dioxygenase by design for improving the performance of the cis, cis-muconic acid synthetic pathway in Escherichia coli.

Authors:  Li Han; Pi Liu; Jixue Sun; Yuanqing Wu; Yuanyuan Zhang; Wujiu Chen; Jianping Lin; Qinhong Wang; Yanhe Ma
Journal:  Sci Rep       Date:  2015-08-26       Impact factor: 4.379

9.  YeastFab: the design and construction of standard biological parts for metabolic engineering in Saccharomyces cerevisiae.

Authors:  Yakun Guo; Junkai Dong; Tong Zhou; Jamie Auxillos; Tianyi Li; Weimin Zhang; Lihui Wang; Yue Shen; Yisha Luo; Yijing Zheng; Jiwei Lin; Guo-Qiang Chen; Qingyu Wu; Yizhi Cai; Junbiao Dai
Journal:  Nucleic Acids Res       Date:  2015-05-08       Impact factor: 16.971

10.  Adaptive mutations in sugar metabolism restore growth on glucose in a pyruvate decarboxylase negative yeast strain.

Authors:  Yiming Zhang; Guodong Liu; Martin K M Engqvist; Anastasia Krivoruchko; Björn M Hallström; Yun Chen; Verena Siewers; Jens Nielsen
Journal:  Microb Cell Fact       Date:  2015-08-08       Impact factor: 5.328

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