Literature DB >> 23539471

Classification via Bayesian Nonparametric Learning of Affine Subspaces.

Garritt Page1, Abhishek Bhattacharya, David Dunson.   

Abstract

It has become common for data sets to contain large numbers of variables in studies conducted in areas such as genetics, machine vision, image analysis and many others. When analyzing such data, parametric models are often too inflexible while nonparametric procedures tend to be non-robust because of insufficient data on these high dimensional spaces. This is particularly true when interest lies in building efficient classifiers in the presence of many predictor variables. When dealing with these types of data, it is often the case that most of the variability tends to lie along a few directions, or more generally along a much smaller dimensional submanifold of the data space. In this article, we propose a class of models that flexibly learn about this submanifold while simultaneously performing dimension reduction in classification. This methodology, allows the cell probabilities to vary nonparametrically based on a few coordinates expressed as linear combinations of the predictors. Also, as opposed to many black-box methods for dimensionality reduction, the proposed model is appealing in having clearly interpretable and identifiable parameters which provide insight into which predictors are important in determining accurate classification boundaries. Gibbs sampling methods are developed for posterior computation, and the methods are illustrated using simulated and real data applications.

Entities:  

Keywords:  Classifier; Dimension reduction; Nonparametric Bayes; Variable selection

Year:  2013        PMID: 23539471      PMCID: PMC3607648          DOI: 10.1080/01621459.2013.763566

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  7 in total

1.  Sufficient dimension reduction via bayesian mixture modeling.

Authors:  Brian J Reich; Howard D Bondell; Lexin Li
Journal:  Biometrics       Date:  2010-10-29       Impact factor: 2.571

2.  Sparse Bayesian infinite factor models.

Authors:  A Bhattacharya; D B Dunson
Journal:  Biometrika       Date:  2011-06       Impact factor: 2.445

3.  Nonparametric Bayes Classification and Hypothesis Testing on Manifolds.

Authors:  Abhishek Bhattacharya; David Dunson
Journal:  J Multivar Anal       Date:  2012-04-17       Impact factor: 1.473

4.  Strong consistency of nonparametric Bayes density estimation on compact metric spaces with applications to specific manifolds.

Authors:  Abhishek Bhattacharya; David B Dunson
Journal:  Ann Inst Stat Math       Date:  2011-11-18       Impact factor: 1.267

5.  Compressive Sensing on Manifolds Using a Nonparametric Mixture of Factor Analyzers: Algorithm and Performance Bounds.

Authors:  Minhua Chen; Jorge Silva; John Paisley; Chunping Wang; David Dunson; Lawrence Carin
Journal:  IEEE Trans Signal Process       Date:  2010-12       Impact factor: 4.931

6.  Bayesian Nonparametric Hidden Markov Models with application to the analysis of copy-number-variation in mammalian genomes.

Authors:  C Yau; O Papaspiliopoulos; G O Roberts; C Holmes
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2011-01-01       Impact factor: 4.488

7.  Probabilistic principal component analysis for metabolomic data.

Authors:  Gift Nyamundanda; Lorraine Brennan; Isobel Claire Gormley
Journal:  BMC Bioinformatics       Date:  2010-11-23       Impact factor: 3.169

  7 in total
  1 in total

1.  Nonparametric Bayes Classification and Hypothesis Testing on Manifolds.

Authors:  Abhishek Bhattacharya; David Dunson
Journal:  J Multivar Anal       Date:  2012-04-17       Impact factor: 1.473

  1 in total

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