Literature DB >> 23538864

Reproducibility restored--on toward the human interactome.

Pascal Braun1.   

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Year:  2013        PMID： 23538864     DOI： 10.1038/nmeth.2412

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  10 in total

1.  Proteome survey reveals modularity of the yeast cell machinery.

Authors:  Anne-Claude Gavin; Patrick Aloy; Paola Grandi; Roland Krause; Markus Boesche; Martina Marzioch; Christina Rau; Lars Juhl Jensen; Sonja Bastuck; Birgit Dümpelfeld; Angela Edelmann; Marie-Anne Heurtier; Verena Hoffman; Christian Hoefert; Karin Klein; Manuela Hudak; Anne-Marie Michon; Malgorzata Schelder; Markus Schirle; Marita Remor; Tatjana Rudi; Sean Hooper; Andreas Bauer; Tewis Bouwmeester; Georg Casari; Gerard Drewes; Gitte Neubauer; Jens M Rick; Bernhard Kuster; Peer Bork; Robert B Russell; Giulio Superti-Furga
Journal:  Nature       Date:  2006-01-22       Impact factor: 49.962

2.  Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae.

Authors:  Sean R Collins; Patrick Kemmeren; Xue-Chu Zhao; Jack F Greenblatt; Forrest Spencer; Frank C P Holstege; Jonathan S Weissman; Nevan J Krogan
Journal:  Mol Cell Proteomics       Date:  2007-01-02       Impact factor: 5.911

Review 3.  Interactome mapping for analysis of complex phenotypes: insights from benchmarking binary interaction assays.

Authors:  Pascal Braun
Journal:  Proteomics       Date:  2012-05       Impact factor: 3.984

Review 4.  Interactome networks and human disease.

Authors:  Marc Vidal; Michael E Cusick; Albert-László Barabási
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

5.  Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS.

Authors:  Markku Varjosalo; Roberto Sacco; Alexey Stukalov; Audrey van Drogen; Melanie Planyavsky; Simon Hauri; Ruedi Aebersold; Keiryn L Bennett; Jacques Colinge; Matthias Gstaiger; Giulio Superti-Furga
Journal:  Nat Methods       Date:  2013-03-03       Impact factor: 28.547

6.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

7.  Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Authors:  Nevan J Krogan; Gerard Cagney; Haiyuan Yu; Gouqing Zhong; Xinghua Guo; Alexandr Ignatchenko; Joyce Li; Shuye Pu; Nira Datta; Aaron P Tikuisis; Thanuja Punna; José M Peregrín-Alvarez; Michael Shales; Xin Zhang; Michael Davey; Mark D Robinson; Alberto Paccanaro; James E Bray; Anthony Sheung; Bryan Beattie; Dawn P Richards; Veronica Canadien; Atanas Lalev; Frank Mena; Peter Wong; Andrei Starostine; Myra M Canete; James Vlasblom; Samuel Wu; Chris Orsi; Sean R Collins; Shamanta Chandran; Robin Haw; Jennifer J Rilstone; Kiran Gandi; Natalie J Thompson; Gabe Musso; Peter St Onge; Shaun Ghanny; Mandy H Y Lam; Gareth Butland; Amin M Altaf-Ul; Shigehiko Kanaya; Ali Shilatifard; Erin O'Shea; Jonathan S Weissman; C James Ingles; Timothy R Hughes; John Parkinson; Mark Gerstein; Shoshana J Wodak; Andrew Emili; Jack F Greenblatt
Journal:  Nature       Date:  2006-03-22       Impact factor: 49.962

8.  SAINT: probabilistic scoring of affinity purification-mass spectrometry data.

Authors:  Hyungwon Choi; Brett Larsen; Zhen-Yuan Lin; Ashton Breitkreutz; Dattatreya Mellacheruvu; Damian Fermin; Zhaohui S Qin; Mike Tyers; Anne-Claude Gingras; Alexey I Nesvizhskii
Journal:  Nat Methods       Date:  2010-12-05       Impact factor: 28.547

9.  Literature-curated protein interaction datasets.

Authors:  Michael E Cusick; Haiyuan Yu; Alex Smolyar; Kavitha Venkatesan; Anne-Ruxandra Carvunis; Nicolas Simonis; Jean-François Rual; Heather Borick; Pascal Braun; Matija Dreze; Jean Vandenhaute; Mary Galli; Junshi Yazaki; David E Hill; Joseph R Ecker; Frederick P Roth; Marc Vidal
Journal:  Nat Methods       Date:  2009-01       Impact factor: 28.547

10.  An experimentally derived confidence score for binary protein-protein interactions.

Authors:  Pascal Braun; Murat Tasan; Matija Dreze; Miriam Barrios-Rodiles; Irma Lemmens; Haiyuan Yu; Julie M Sahalie; Ryan R Murray; Luba Roncari; Anne-Sophie de Smet; Kavitha Venkatesan; Jean-François Rual; Jean Vandenhaute; Michael E Cusick; Tony Pawson; David E Hill; Jan Tavernier; Jeffrey L Wrana; Frederick P Roth; Marc Vidal
Journal:  Nat Methods       Date:  2008-12-07       Impact factor: 28.547
  10 in total
  1 in total

Review 1.  Recent Advances in Substrate Identification of Protein Kinases in Plants and Their Role in Stress Management.

Authors:  Saroj K Jha; Shikha Malik; Manisha Sharma; Amita Pandey; Girdhar K Pandey
Journal:  Curr Genomics       Date:  2017-12       Impact factor: 2.236
  1 in total

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