Literature DB >> 23534955

Similarity in dissymmetry factor spectra: a quantitative measure of comparison between experimental and predicted vibrational circular dichroism.

Cody L Covington1, Prasad L Polavarapu.   

Abstract

To quantitatively determine the agreement between experimental and calculated vibrational circular dichroism (VCD) spectra, a new approach, based on the similarity of dissymmetry factor spectra has been developed and implemented. This method, which places emphasis on robust regions both in the experimental and in the calculated spectra, has been tested with six chiral compounds of known absolute configurations, namely, (R)-(+)-3-chloro-1-butyne, (3R)-(+)-methylcyclopentanone, (3R)-(+)-methylcyclohexanone, (1S)-(-)-α-pinene, (1R)-(+)-camphor, and (S)-(+)-epichlorohydrin. The criterion of maximum overlap among experimental and calculated dissymmetry factor spectra is shown to have definite advantages over those using maximum overlap among VCD or absorption spectra individually. The new method provides a better assessment of the comparison between experimental observations and quantum chemical VCD predictions and improves the confidence in the assignment of absolute configurations.

Entities:  

Year:  2013        PMID: 23534955     DOI: 10.1021/jp401079s

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  7 in total

1.  Structure and Stereochemical Determination of Hypogeamicins from a Cave-Derived Actinomycete.

Authors:  Dagmara K Derewacz; C Ruth McNees; Giovanni Scalmani; Cody L Covington; Ganesh Shanmugam; Lawrence J Marnett; Prasad L Polavarapu; Brian O Bachmann
Journal:  J Nat Prod       Date:  2014-07-21       Impact factor: 4.050

2.  Wide Distribution of Foxicin Biosynthetic Gene Clusters in Streptomyces Strains - An Unusual Secondary Metabolite with Various Properties.

Authors:  Anja Greule; Marija Marolt; Denise Deubel; Iris Peintner; Songya Zhang; Claudia Jessen-Trefzer; Christian De Ford; Sabrina Burschel; Shu-Ming Li; Thorsten Friedrich; Irmgard Merfort; Steffen Lüdeke; Philippe Bisel; Michael Müller; Thomas Paululat; Andreas Bechthold
Journal:  Front Microbiol       Date:  2017-02-21       Impact factor: 5.640

3.  Elucidating the Vibrational Fingerprint of the Flexible Metal-Organic Framework MIL-53(Al) Using a Combined Experimental/Computational Approach.

Authors:  Alexander E J Hoffman; Louis Vanduyfhuys; Irena Nevjestić; Jelle Wieme; Sven M J Rogge; Hannes Depauw; Pascal Van Der Voort; Henk Vrielinck; Veronique Van Speybroeck
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2018-01-08       Impact factor: 4.126

4.  A Holistic Approach to Determining Stereochemistry of Potential Pharmaceuticals by Circular Dichroism with β-Lactams as Test Cases.

Authors:  Marcin Górecki; Jadwiga Frelek
Journal:  Int J Mol Sci       Date:  2021-12-27       Impact factor: 5.923

5.  The Virtual Multifrequency Spectrometer: a new paradigm for spectroscopy.

Authors:  Vincenzo Barone
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2016 Mar/Apr

Review 6.  Enantiomeric Mixtures in Natural Product Chemistry: Separation and Absolute Configuration Assignment.

Authors:  Andrea N L Batista; Fernando M Dos Santos; João M Batista; Quezia B Cass
Journal:  Molecules       Date:  2018-02-23       Impact factor: 4.411

7.  The Assignment of the Absolute Configuration of Non-Cyclic Sesquiterpenes by Vibrational and Electronic Circular Dichroism: The Example of Chiliadenus lopadusanus Metabolites.

Authors:  Giuseppe Mazzeo; Alessio Cimmino; Giovanna Longhi; Marco Masi; Antonio Evidente; Sergio Abbate
Journal:  Biomolecules       Date:  2021-12-18
  7 in total

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