Literature DB >> 23532838

Structure and activity of the flagellar rotor protein FliY: a member of the CheC phosphatase family.

Ria Sircar1, Anna R Greenswag, Alexandrine M Bilwes, Gabriela Gonzalez-Bonet, Brian R Crane.   

Abstract

BACKGROUND: FliY is a flagellar rotor protein of the CheC phosphatase family.
RESULTS: The FliY structure resembles that of the rotor protein FliM but contains two active centers for CheY dephosphorylation.
CONCLUSION: FliY incorporates properties of the FliM/FliN rotor proteins and the CheC/CheX phosphatases to serve multiple functions in the flagellar switch. SIGNIFICANCE: FliY distinguishes flagellar architecture and function in different types of bacteria. Rotating flagella propel bacteria toward favorable environments. Sense of rotation is determined by the intracellular response regulator CheY, which when phosphorylated (CheY-P) interacts directly with the flagellar motor. In many different types of bacteria, the CheC/CheX/FliY (CXY) family of phosphatases terminates the CheY-P signal. Unlike CheC and CheX, FliY is localized in the flagellar switch complex, which also contains the stator-coupling protein FliG and the target of CheY-P, FliM. The 2.5 Å resolution crystal structure of the FliY catalytic domain from Thermotoga maritima bears strong resemblance to the middle domain of FliM. Regions of FliM that mediate contacts within the rotor compose the phosphatase active sites in FliY. Despite the similarity between FliY and FliM, FliY does not bind FliG and thus is unlikely to be a substitute for FliM in the center of the switch complex. Solution studies indicate that FliY dimerizes through its C-terminal domains, which resemble the Escherichia coli switch complex component FliN. FliY differs topologically from the E. coli chemotaxis phosphatase CheZ but appears to utilize similar structural motifs for CheY dephosphorylation in close analogy to CheX. Recognition properties and phosphatase activities of site-directed mutants identify two pseudosymmetric active sites in FliY (Glu(35)/Asn(38) and Glu(132)/Asn(135)), with the second site (Glu(132)/Asn(135)) being more active. A putative N-terminal CheY binding domain conserved with FliM is not required for binding CheY-P or phosphatase activity.

Entities:  

Keywords:  Bacterial Protein Phosphatases; Bacterial Signal Transduction; Cell Motility; Chemotaxis; Flagella Rotor; Protein-protein Interactions; X-ray Crystallography

Mesh:

Substances:

Year:  2013        PMID: 23532838      PMCID: PMC3650386          DOI: 10.1074/jbc.M112.445171

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

1.  Structure of the C-terminal domain of FliG, a component of the rotor in the bacterial flagellar motor.

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2.  Protein secondary structure prediction based on position-specific scoring matrices.

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4.  Receptor sensitivity in bacterial chemotaxis.

Authors:  Victor Sourjik; Howard C Berg
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5.  Interactions of the chemotaxis signal protein CheY with bacterial flagellar motors visualized by evanescent wave microscopy.

Authors:  S Khan; D Pierce; R D Vale
Journal:  Curr Biol       Date:  2000 Jul 27-Aug 10       Impact factor: 10.834

6.  Crystal structure of activated CheY. Comparison with other activated receiver domains.

Authors:  S Y Lee; H S Cho; J G Pelton; D Yan; E A Berry; D E Wemmer
Journal:  J Biol Chem       Date:  2001-02-13       Impact factor: 5.157

7.  CheC is related to the family of flagellar switch proteins and acts independently from CheD to control chemotaxis in Bacillus subtilis.

Authors:  J R Kirby; C J Kristich; M M Saulmon; M A Zimmer; L F Garrity; I B Zhulin; G W Ordal
Journal:  Mol Microbiol       Date:  2001-11       Impact factor: 3.501

8.  Crystal structure of an activated response regulator bound to its target.

Authors:  S Y Lee; H S Cho; J G Pelton; D Yan; R K Henderson; D S King; L Huang; S Kustu; E A Berry; D E Wemmer
Journal:  Nat Struct Biol       Date:  2001-01

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  Structure and catalytic mechanism of the E. coli chemotaxis phosphatase CheZ.

Authors:  Rui Zhao; Edward J Collins; Robert B Bourret; Ruth E Silversmith
Journal:  Nat Struct Biol       Date:  2002-08
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  20 in total

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Authors:  Christine Josenhans; Kirsten Jung; Christopher V Rao; Alan J Wolfe
Journal:  Mol Microbiol       Date:  2013-10-31       Impact factor: 3.501

2.  One Basic Blueprint, Many Different Motors.

Authors:  Michael D Manson
Journal:  J Bacteriol       Date:  2019-03-26       Impact factor: 3.490

Review 3.  The structure and regulation of flagella in Bacillus subtilis.

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Journal:  Annu Rev Genet       Date:  2014-09-10       Impact factor: 16.830

4.  Assembly states of FliM and FliG within the flagellar switch complex.

Authors:  Ria Sircar; Peter P Borbat; Michael J Lynch; Jaya Bhatnagar; Matthew S Beyersdorf; Christopher J Halkides; Jack H Freed; Brian R Crane
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5.  An autoinhibitory conformation of the Bacillus subtilis spore coat protein SpoIVA prevents its premature ATP-independent aggregation.

Authors:  Jean-Philippe Castaing; Scarlett Lee; Vivek Anantharaman; Geoffrey E Ravilious; L Aravind; Kumaran S Ramamurthi
Journal:  FEMS Microbiol Lett       Date:  2014-05-20       Impact factor: 2.742

6.  Organization of the Flagellar Switch Complex of Bacillus subtilis.

Authors:  Elizabeth Ward; Eun A Kim; Joseph Panushka; Tayson Botelho; Trevor Meyer; Daniel B Kearns; George Ordal; David F Blair
Journal:  J Bacteriol       Date:  2019-03-26       Impact factor: 3.490

7.  Three SpoA-domain proteins interact in the creation of the flagellar type III secretion system in Helicobacter pylori.

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Journal:  J Biol Chem       Date:  2018-07-10       Impact factor: 5.157

Review 8.  Structure and function of the bi-directional bacterial flagellar motor.

Authors:  Yusuke V Morimoto; Tohru Minamino
Journal:  Biomolecules       Date:  2014-02-18

Review 9.  Molecular architecture of the bacterial flagellar motor in cells.

Authors:  Xiaowei Zhao; Steven J Norris; Jun Liu
Journal:  Biochemistry       Date:  2014-07-01       Impact factor: 3.162

10.  Characterisation of Shigella Spa33 and Thermotoga FliM/N reveals a new model for C-ring assembly in T3SS.

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Journal:  Mol Microbiol       Date:  2015-12-23       Impact factor: 3.501

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