Literature DB >> 23521662

Accuracy and precision in camera-based fluorescence correlation spectroscopy measurements.

Jagadish Sankaran1, Nirmalya Bag, Rachel Susan Kraut, Thorsten Wohland.   

Abstract

Imaging fluorescence correlation spectroscopy (FCS) performed using array detectors has been successfully used to quantify the number, mobility, and organization of biomolecules in cells and organisms. However, there have not been any systematic studies on the errors in these estimates that are introduced due to instrumental and experimental factors. State-of-the-art array detectors are still restricted in the number of frames that can be recorded per unit time, sensitivity and noise characteristics, and the total number of frames that can be realistically recorded. These limitations place constraints on the time resolution, the signal-to-noise ratio, and the total measurement time, respectively. This work addresses these problems by using a combination of simulations and experiments on lipid bilayers to provide characteristic performance parameters and guidelines that govern accuracy and precision of diffusion coefficient and concentration measurements in camera-based FCS. We then proceed to demonstrate the effects of these parameters on the capability of camera-based FCS to determine membrane heterogeneity via the FCS diffusion laws, showing that there is a lower length scale limit beyond which membrane organization cannot be detected and which can be overcome by choosing suitable experimental parameters. On the basis of these results, we provide guidelines for an efficient experimental design for camera-based FCS to extract information on mobility, concentration, and heterogeneity.

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Year:  2013        PMID: 23521662     DOI: 10.1021/ac303485t

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  20 in total

1.  Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms.

Authors:  Jan W Krieger; Anand P Singh; Nirmalya Bag; Christoph S Garbe; Timothy E Saunders; Jörg Langowski; Thorsten Wohland
Journal:  Nat Protoc       Date:  2015-11-05       Impact factor: 13.491

2.  Bayesian total internal reflection fluorescence correlation spectroscopy reveals hIAPP-induced plasma membrane domain organization in live cells.

Authors:  Syuan-Ming Guo; Nirmalya Bag; Aseem Mishra; Thorsten Wohland; Mark Bathe
Journal:  Biophys J       Date:  2014-01-07       Impact factor: 4.033

3.  On the Equivalence of FCS and FRAP: Simultaneous Lipid Membrane Measurements.

Authors:  Radek Macháň; Yong Hwee Foo; Thorsten Wohland
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

4.  Combined Selective Plane Illumination Microscopy and FRAP Maps Intranuclear Diffusion of NLS-GFP.

Authors:  Chad M Hobson; E Timothy O'Brien; Michael R Falvo; Richard Superfine
Journal:  Biophys J       Date:  2020-07-10       Impact factor: 4.033

5.  3D Protein Dynamics in the Cell Nucleus.

Authors:  Anand P Singh; Rémi Galland; Megan L Finch-Edmondson; Gianluca Grenci; Jean-Baptiste Sibarita; Vincent Studer; Virgile Viasnoff; Timothy E Saunders
Journal:  Biophys J       Date:  2017-01-10       Impact factor: 4.033

6.  The disordered plant dehydrin Lti30 protects the membrane during water-related stress by cross-linking lipids.

Authors:  Anjali Gupta; Jan K Marzinek; Damien Jefferies; Peter J Bond; Pia Harryson; Thorsten Wohland
Journal:  J Biol Chem       Date:  2019-02-28       Impact factor: 5.157

7.  Widefield High Frame Rate Single-Photon SPAD Imagers for SPIM-FCS.

Authors:  Jan Buchholz; Jan Krieger; Claudio Bruschini; Samuel Burri; Andrei Ardelean; Edoardo Charbon; Jörg Langowski
Journal:  Biophys J       Date:  2018-05-10       Impact factor: 4.033

8.  The Secreted Signaling Protein Wnt3 Is Associated with Membrane Domains In Vivo: A SPIM-FCS Study.

Authors:  Xue Wen Ng; Cathleen Teh; Vladimir Korzh; Thorsten Wohland
Journal:  Biophys J       Date:  2016-07-26       Impact factor: 4.033

9.  To Hop or not to Hop: Exceptions in the FCS Diffusion Law.

Authors:  Anjali Gupta; Inn Yee Phang; Thorsten Wohland
Journal:  Biophys J       Date:  2020-04-15       Impact factor: 4.033

10.  Plasma Membrane Organization of Epidermal Growth Factor Receptor in Resting and Ligand-Bound States.

Authors:  Nirmalya Bag; Shuangru Huang; Thorsten Wohland
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

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