| Literature DB >> 23516526 |
Yan Zhao1, Liju Tao, Dongpo Jiang, Xingyun Chen, Ping Li, Yalei Ning, Renping Xiong, Ping Liu, Yizhi Peng, Yuan-Guo Zhou.
Abstract
INTRODUCTION: Variations in genetic background are the leading cause of differential susceptibility to traumatic infection. Heat shock protein 90 (HSP90), a broadly distributed and conserved molecule, regulates inflammation under stressful and traumatic conditions. However, the relationships between HSP90 genetic polymorphisms, post-traumatic inflammatory responses and organ function remain unknown.Entities:
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Year: 2013 PMID: 23516526 PMCID: PMC3596273 DOI: 10.1371/journal.pone.0058646
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Overview of selected SNPs and their linkage disequilibrium (LD) statistics.
(A) The locations of seven SNPs within the promoter of the HSP90beta gene. The data in the grids indicate D′ values. (B) Alleles of the seven SNPs and their r2 values. The results indicated that the five SNPs (−741, −509, −417, −398 and −257) were closely linked.
Distributions of 3 SNPs of the HSP90beta promoter in healthy and trauma patients.
| N | −741, N(%) | −144, N(%) | −141, N(%) | |||||||
| GG | GC | CC | CC | CA | AA | TT | TC | CC | ||
| Healthy | 144 | 76(52.78) | 61(42.36) | 7(4.86) | 73(50.69) | 60(41.67) | 11(7.64) | 50(34.72) | 63(43.75) | 31(21.53) |
| 26.04 | 28.47 | 43.40 | ||||||||
| Patients | 142 | 82(57.75) | 54(38.03) | 6(4.25) | 73(51.40) | 57(40.14) | 12(8.45) | 52(36.62) | 59(41.55) | 31(21.83) |
| 23.24 | 28.52 | 42.61 | ||||||||
| Total | 286 | 158(55.24) | 115(40.21) | 13(4.55) | 146(51.05) | 117(40.91) | 23(8.04) | 102(35.66) | 122(42.66) | 62(21.68) |
| 24.65 | 28.50 | 43.01 | ||||||||
indicates minor allele frequency (MAF).
Figure 2Relative levels of HSP90beta and TNF-alpha in the cultured white blood cells.
Relative mRNA levels of HSP90beta (A) and TNF-alpha (B) in cultured white blood cells (WBC) from healthy patients were assayed using quantitative PCR. Relative mRNA levels were normalized to the house-keeping gene GAPDH and quantified relative to the wild-type (-144CC) levels without LPS stimulation. Normalized band densities of HSP90beta protein (C) and representative immunoblots from healthy-patient samples (D). Data were normalized to beta-actin and quantified relative to the wild-type (-144CC) levels without LPS stimulation. WBCs were incubated with 200 ng/ml LPS at 37°C for 3 h. <0.01 between the two groups; <0.05 between the two groups; = 0.017 for A, p = 0.033 for B and p = 0.001 for C, the dominant effect (variant homozygotes+heterozygotes vs. wild-type homozygotes) was analyzed using a one-way ANOVA; = 0.109 for A, p = 0.07 for B and p = 0.061 for C, the recessive effect (variant homozygotes vs. heterozygotes+wild-type homozygotes) was analyzed using a one-way ANOVA. The results are shown as the mean±SEM values from three independent experiments.
Figure 3Effects of the −144 SNP of the HSP90beta promoter on transcriptional activity.
Luciferase activity was normalized to control plasmid (pRL-CMV) expression. The results are shown as the mean±SEM (n = 4) values. The HSP90beta promoter vectors pGL3-144C (major allele) and pGL3-144A (minor allele) were transfected into U937 cells. pGL3-Basic and pGL3-SV40 were used as negative and positive control vectors, respectively. Relative luciferase activity was measured 24 h post-transfection with or without heat stress at 42°C for 1 h. Data are expressed as the fold-increase in luciferase activity relative to pGL3-Basic. A one-way ANOVA was used to assess statistical significance. <0.05, <0.01 between the two groups.
Clinical characteristics of patients with severe trauma (n = 142).
| Age [avg. yrs (range)] | 42.1±14.5(19–84) |
| Male/Female | 107/35 |
| ISS | 29.6±15.2 |
| 16≤ISS<25 (n) | 72 |
| ≥25 (n) | 70 |
| MODS (n, %) | 40 (28.2) |
| Sepsis (n, %) | 51 (35.9) |
| Non-survive (n, %) | 8 (5.6) |
ISS, Injury Severity Score; MOD, multiple organ dysfunction.
Clinical relevance of 3 SNPs of the HSP90beta promoter in severe trauma patients.
| Sites | genotype | Gender (F/M) | Age(yr) | ISS | MOD Score | Sepsis n(%) | HWE |
| −741 | GG | 14/68 | 42.3±15.1 | 30.6±15.0 | 2.26±0.39 | 29(35.4) | |
| GC | 19/35 | 41.6±14.0 | 28.6±14.4 | 1.63±0.40 | 20(37.0) | 0.432 | |
| CC | 1/6 | 46.0±10.4 | 24.5±10.6 | 2.10±0.40 | 2(33.3) | ||
| −144 | CC | 13/60 | 42.3±15.2 | 31.7±16.2 | 2.26±0.43 | 26(35.6) | |
| CA | 19/38 | 42.7±13.8 | 28.5±12.7 | 1.61±0.37 | 21(36.8) | 0.853 | |
| AA | 3/9 | 38.0±12.8 | 22.2±6.9 | 1.58±1.06 | 4(33.3) | ||
| abc | |||||||
| −141 | TT | 11/41 | 41.9±14.9 | 30.8±15.1 | 2.55±0.53 | 18(34.6) | |
| TC | 15/44 | 41.2±13.2 | 29.7±15.1 | 1.85±0.44 | 21(35.6) | 0.073 | |
| CC | 8/23 | 44.1±16.3 | 27.4±12.6 | 1.13±0.37 | 12(38.7) |
p = 0.011, the dominant effect (variant homozygotes + heterozygotes vs. wild-type homozygotes) was analyzed using a one-way ANOVA; = 0.17, the recessive effect (variant homozygotes vs. heterozygotes+wild-type homozygotes) was analyzed using a one-way ANOVA; = 0.01, the allele dose effect was analyzed using linear regression analysis; HWE, Hardy-Weinberg equilibrium; χ2 analysis was used to test for deviation from HWE; F, female; M, male; ISS, Injury Severity Score; MOD, multiple organ dysfunction.