Literature DB >> 23513222

Atomic structure and hierarchical assembly of a cross-β amyloid fibril.

Anthony W P Fitzpatrick1, Galia T Debelouchina, Marvin J Bayro, Daniel K Clare, Marc A Caporini, Vikram S Bajaj, Christopher P Jaroniec, Luchun Wang, Vladimir Ladizhansky, Shirley A Müller, Cait E MacPhee, Christopher A Waudby, Helen R Mott, Alfonso De Simone, Tuomas P J Knowles, Helen R Saibil, Michele Vendruscolo, Elena V Orlova, Robert G Griffin, Christopher M Dobson.   

Abstract

The cross-β amyloid form of peptides and proteins represents an archetypal and widely accessible structure consisting of ordered arrays of β-sheet filaments. These complex aggregates have remarkable chemical and physical properties, and the conversion of normally soluble functional forms of proteins into amyloid structures is linked to many debilitating human diseases, including several common forms of age-related dementia. Despite their importance, however, cross-β amyloid fibrils have proved to be recalcitrant to detailed structural analysis. By combining structural constraints from a series of experimental techniques spanning five orders of magnitude in length scale--including magic angle spinning nuclear magnetic resonance spectroscopy, X-ray fiber diffraction, cryoelectron microscopy, scanning transmission electron microscopy, and atomic force microscopy--we report the atomic-resolution (0.5 Å) structures of three amyloid polymorphs formed by an 11-residue peptide. These structures reveal the details of the packing interactions by which the constituent β-strands are assembled hierarchically into protofilaments, filaments, and mature fibrils.

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Year:  2013        PMID: 23513222      PMCID: PMC3619355          DOI: 10.1073/pnas.1219476110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

Review 1.  Protein misfolding, evolution and disease.

Authors:  C M Dobson
Journal:  Trends Biochem Sci       Date:  1999-09       Impact factor: 13.807

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Authors:  Marcus Fändrich; Christopher M Dobson
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3.  High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Vikram S Bajaj; Michael T McMahon; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

4.  Structural characterization of polyglutamine fibrils by solid-state NMR spectroscopy.

Authors:  Robert Schneider; Miria C Schumacher; Henrik Mueller; Deepak Nand; Volker Klaukien; Henrike Heise; Dietmar Riedel; Gerhard Wolf; Elmar Behrmann; Stefan Raunser; Ralf Seidel; Martin Engelhard; Marc Baldus
Journal:  J Mol Biol       Date:  2011-07-13       Impact factor: 5.469

5.  Polymorphic fibrillar assembly of human amylin.

Authors:  C S Goldsbury; G J Cooper; K N Goldie; S A Müller; E L Saafi; W T Gruijters; M P Misur; A Engel; U Aebi; J Kistler
Journal:  J Struct Biol       Date:  1997-06       Impact factor: 2.867

6.  Band-selective carbonyl to aliphatic side chain 13C-13C distance measurements in U-13C,15N-labeled solid peptides by magic angle spinning NMR.

Authors:  Vladimir Ladizhansky; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2004-01-28       Impact factor: 15.419

7.  Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core.

Authors:  Christian Wasmer; Adam Lange; Hélène Van Melckebeke; Ansgar B Siemer; Roland Riek; Beat H Meier
Journal:  Science       Date:  2008-03-14       Impact factor: 47.728

8.  Functionalised amyloid fibrils for roles in cell adhesion.

Authors:  Sally L Gras; Anna K Tickler; Adam M Squires; Glyn L Devlin; Michael A Horton; Christopher M Dobson; Cait E MacPhee
Journal:  Biomaterials       Date:  2007-12-31       Impact factor: 12.479

9.  Intermolecular structure determination of amyloid fibrils with magic-angle spinning and dynamic nuclear polarization NMR.

Authors:  Marvin J Bayro; Galia T Debelouchina; Matthew T Eddy; Neil R Birkett; Catherine E MacPhee; Melanie Rosay; Werner E Maas; Christopher M Dobson; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2011-08-12       Impact factor: 15.419

10.  Mechanism of prion propagation: amyloid growth occurs by monomer addition.

Authors:  Sean R Collins; Adam Douglass; Ronald D Vale; Jonathan S Weissman
Journal:  PLoS Biol       Date:  2004-09-21       Impact factor: 8.029

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  160 in total

Review 1.  Supramolecular Hydrogelators and Hydrogels: From Soft Matter to Molecular Biomaterials.

Authors:  Xuewen Du; Jie Zhou; Junfeng Shi; Bing Xu
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2.  Peptide dimer structure in an Aβ(1-42) fibril visualized with cryo-EM.

Authors:  Matthias Schmidt; Alexis Rohou; Keren Lasker; Jay K Yadav; Cordelia Schiene-Fischer; Marcus Fändrich; Nikolaus Grigorieff
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-08       Impact factor: 11.205

3.  A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining.

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Review 4.  Molecular interactions of amyloid nanofibrils with biological aggregation modifiers: implications for cytotoxicity mechanisms and biomaterial design.

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Journal:  Interface Focus       Date:  2017-06-16       Impact factor: 3.906

5.  Water Distribution, Dynamics, and Interactions with Alzheimer's β-Amyloid Fibrils Investigated by Solid-State NMR.

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Journal:  J Am Chem Soc       Date:  2017-04-21       Impact factor: 15.419

6.  Exceptional rigidity and biomechanics of amyloid revealed by 4D electron microscopy.

Authors:  Anthony W P Fitzpatrick; Sang Tae Park; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-19       Impact factor: 11.205

Review 7.  RNA polymerase II C-terminal domain: Tethering transcription to transcript and template.

Authors:  Jeffry L Corden
Journal:  Chem Rev       Date:  2013-09-16       Impact factor: 60.622

8.  Atomic Resolution Structure of Monomorphic Aβ42 Amyloid Fibrils.

Authors:  Michael T Colvin; Robert Silvers; Qing Zhe Ni; Thach V Can; Ivan Sergeyev; Melanie Rosay; Kevin J Donovan; Brian Michael; Joseph Wall; Sara Linse; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2016-07-14       Impact factor: 15.419

9.  Zinc-binding structure of a catalytic amyloid from solid-state NMR.

Authors:  Myungwoon Lee; Tuo Wang; Olga V Makhlynets; Yibing Wu; Nicholas F Polizzi; Haifan Wu; Pallavi M Gosavi; Jan Stöhr; Ivan V Korendovych; William F DeGrado; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-31       Impact factor: 11.205

Review 10.  Lessons learned from protein aggregation: toward technological and biomedical applications.

Authors:  César L Avila; Silvina Chaves; Sergio B Socias; Esteban Vera-Pingitore; Florencia González-Lizárraga; Cecilia Vera; Diego Ploper; Rosana Chehín
Journal:  Biophys Rev       Date:  2017-09-13
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