Literature DB >> 23507381

A computational model for diffusion weighted imaging of myelinated white matter.

Gregory T Baxter1, Lawrence R Frank2.   

Abstract

The signal for diffusion weighted magnetic resonance imaging has previously been represented analytically and simulated numerically for a variety of model problems with idealized geometries. Numerical simulations hold the promise of computing the diffusion weighted MR signal for more complex realistic tissue architectures and physiological models. This paper investigates a white matter model consisting of a matrix of coated cylinders with distinct diffusion coefficients and spin concentrations for each of the cylinder core, the coating, and the surrounding bath and compares results with an the analytical solution developed by Sen and Basser for the long diffusion time limit. Numerical simulations of diffusion weighted imaging experiments are performed for the three-medium model using a Monte Carlo diffusion simulation. Experiments are carried out for model parameters representing normal white matter. Pulse sequence parameters range from a low b value, long time limit, short pulse approximation to realistic clinical values. For simulations in the short pulse width, long diffusion time limit, numerical simulations agree with the Sen-Basser analytical result. When tested with realistic pulse sequence parameters, numerical simulations show lower anisotropy than the analytical model predicts. Published by Elsevier Inc.

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Year:  2013        PMID: 23507381      PMCID: PMC3683096          DOI: 10.1016/j.neuroimage.2013.02.076

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  17 in total

1.  Modeling diffusion in white matter in the brain: a composite porous medium.

Authors:  Pabitra N Sen; Peter J Basser
Journal:  Magn Reson Imaging       Date:  2005-02       Impact factor: 2.546

2.  A model for diffusion in white matter in the brain.

Authors:  Pabitra N Sen; Peter J Basser
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

3.  The effect of finite diffusion gradient pulse duration on fibre orientation estimation in diffusion MRI.

Authors:  Chun-Hung Yeh; J-Donald Tournier; Kuan-Hung Cho; Ching-Po Lin; Fernando Calamante; Alan Connelly
Journal:  Neuroimage       Date:  2010-02-24       Impact factor: 6.556

4.  Evaluation of diffusion models of fiber tracts using diffusion tensor magnetic resonance imaging.

Authors:  Esmaeil Davoodi-Bojd; Hamid Soltanian-Zadeh
Journal:  Magn Reson Imaging       Date:  2011-08-27       Impact factor: 2.546

5.  In vivo measurement of T2 distributions and water contents in normal human brain.

Authors:  K P Whittall; A L MacKay; D A Graeb; R A Nugent; D K Li; D W Paty
Journal:  Magn Reson Med       Date:  1997-01       Impact factor: 4.668

6.  Normal-appearing white matter in patients with phenylketonuria: water content, myelin water fraction, and metabolite concentrations.

Authors:  Sandra M Sirrs; Cornelia Laule; Burkhard Mädler; Elana E Brief; Sumia A Tahir; Carole Bishop; Alex L MacKay
Journal:  Radiology       Date:  2007-01       Impact factor: 11.105

7.  Cortical demyelination and diffuse white matter injury in multiple sclerosis.

Authors:  Alexandra Kutzelnigg; Claudia F Lucchinetti; Christine Stadelmann; Wolfgang Brück; Helmut Rauschka; Markus Bergmann; Manfred Schmidbauer; Joseph E Parisi; Hans Lassmann
Journal:  Brain       Date:  2005-10-17       Impact factor: 13.501

8.  An image-based finite difference model for simulating restricted diffusion.

Authors:  Scott N Hwang; Chih-Liang Chin; Felix W Wehrli; David B Hackney
Journal:  Magn Reson Med       Date:  2003-08       Impact factor: 4.668

9.  Reduced frontal white matter integrity in early-onset schizophrenia: a preliminary study.

Authors:  Sanjiv Kumra; Manzar Ashtari; Marjorie McMeniman; Joshua Vogel; Rachel Augustin; David E Becker; Emilie Nakayama; Kunsang Gyato; John M Kane; Kelvin Lim; Philip Szeszko
Journal:  Biol Psychiatry       Date:  2004-06-15       Impact factor: 13.382

10.  Three-pool model of white matter.

Authors:  Jack L Lancaster; Trevor Andrews; L Jean Hardies; Stephen Dodd; Peter T Fox
Journal:  J Magn Reson Imaging       Date:  2003-01       Impact factor: 4.813

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  12 in total

1.  Simulations on the influence of myelin water in diffusion-weighted imaging.

Authors:  K D Harkins; M D Does
Journal:  Phys Med Biol       Date:  2016-06-08       Impact factor: 3.609

2.  Relative enhanced diffusivity: noise sensitivity, protocol optimization, and the relation to intravoxel incoherent motion.

Authors:  Peter T While; Jose R Teruel; Igor Vidić; Tone F Bathen; Pål Erik Goa
Journal:  MAGMA       Date:  2017-11-06       Impact factor: 2.310

3.  A Unified Theory of Neuro-MRI Data Shows Scale-Free Nature of Connectivity Modes.

Authors:  Vitaly L Galinsky; Lawrence R Frank
Journal:  Neural Comput       Date:  2017-03-23       Impact factor: 2.026

Review 4.  Physical and numerical phantoms for the validation of brain microstructural MRI: A cookbook.

Authors:  Els Fieremans; Hong-Hsi Lee
Journal:  Neuroimage       Date:  2018-06-18       Impact factor: 6.556

5.  Functional correlates of central white matter maturation in perinatal period in rabbits.

Authors:  Alexander Drobyshevsky; Rugang Jiang; Matthew Derrick; Kehuan Luo; Sidhartha Tan
Journal:  Exp Neurol       Date:  2014-07-02       Impact factor: 5.330

6.  Brain Waves: Emergence of Localized, Persistent, Weakly Evanescent Cortical Loops.

Authors:  Vitaly L Galinsky; Lawrence R Frank
Journal:  J Cogn Neurosci       Date:  2020-07-21       Impact factor: 3.225

7.  Realistic Microstructure Simulator (RMS): Monte Carlo simulations of diffusion in three-dimensional cell segmentations of microscopy images.

Authors:  Hong-Hsi Lee; Els Fieremans; Dmitry S Novikov
Journal:  J Neurosci Methods       Date:  2020-12-03       Impact factor: 2.390

8.  A Modified Tri-Exponential Model for Multi-b-value Diffusion-Weighted Imaging: A Method to Detect the Strictly Diffusion-Limited Compartment in Brain.

Authors:  Qiang Zeng; Feina Shi; Jianmin Zhang; Chenhan Ling; Fei Dong; Biao Jiang
Journal:  Front Neurosci       Date:  2018-02-26       Impact factor: 4.677

9.  A time-dependent diffusion MRI signature of axon caliber variations and beading.

Authors:  Hong-Hsi Lee; Antonios Papaioannou; Sung-Lyoung Kim; Dmitry S Novikov; Els Fieremans
Journal:  Commun Biol       Date:  2020-07-07

10.  In vivo measurement of cytoplasmic organelle water fraction using diffusion-weighted imaging: Application in the malignant grading and differential diagnosis of gliomas.

Authors:  Chenhan Ling; Feina Shi; Jianmin Zhang; Biao Jiang; Fei Dong; Qiang Zeng
Journal:  Medicine (Baltimore)       Date:  2019-11       Impact factor: 1.817

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