Literature DB >> 23495937

New mechanistic and functional insights into DNA topoisomerases.

Stefanie Hartman Chen1, Nei-Li Chan, Tao-shih Hsieh.   

Abstract

DNA topoisomerases are nature's tools for resolving the unique problems of DNA entanglement that occur owing to unwinding and rewinding of the DNA helix during replication, transcription, recombination, repair, and chromatin remodeling. These enzymes perform topological transformations by providing a transient DNA break, formed by a covalent adduct with the enzyme, through which strand passage can occur. The active site tyrosine is responsible for initiating two transesterifications to cleave and then religate the DNA backbone. The cleavage reaction intermediate is exploited by cytotoxic agents, which have important applications as antibiotics and anticancer drugs. The reactions mediated by these enzymes can also be regulated by their binding partners; one example is a DNA helicase capable of modulating the directionality of strand passage, enabling important functions like reannealing denatured DNA and resolving recombination intermediates. In this review, we cover recent advances in mechanistic insights into topoisomerases and their various cellular functions.

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Year:  2013        PMID: 23495937     DOI: 10.1146/annurev-biochem-061809-100002

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  139 in total

Review 1.  Artificial Molecular Machines.

Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

Review 2.  Targeting bacterial topoisomerase I to meet the challenge of finding new antibiotics.

Authors:  Yuk-Ching Tse-Dinh
Journal:  Future Med Chem       Date:  2015       Impact factor: 3.808

3.  Single-molecule Förster resonance energy transfer (FRET) analysis discloses the dynamics of the DNA-topoisomerase II (Top2) interaction in the presence of TOP2-targeting agents.

Authors:  Wan-Chen Huang; Chun-Ying Lee; Tao-Shih Hsieh
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

4.  Synthesis and dissolution of hemicatenanes by type IA DNA topoisomerases.

Authors:  Shun-Hsiao Lee; Grace Ee-Lu Siaw; Smaranda Willcox; Jack D Griffith; Tao-Shih Hsieh
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-03       Impact factor: 11.205

5.  Bimodal Actions of a Naphthyridone/Aminopiperidine-Based Antibacterial That Targets Gyrase and Topoisomerase IV.

Authors:  Elizabeth G Gibson; Alexandria A Oviatt; Monica Cacho; Keir C Neuman; Pan F Chan; Neil Osheroff
Journal:  Biochemistry       Date:  2019-10-28       Impact factor: 3.162

Review 6.  Topoisomerases and the regulation of neural function.

Authors:  Peter J McKinnon
Journal:  Nat Rev Neurosci       Date:  2016-09-15       Impact factor: 34.870

7.  Modification of topoisomerases in mammospheres derived from breast cancer cell line: clinical implications for combined treatments with tyrosine kinase inhibitors.

Authors:  Refael Peleg; Marianna Romzova; Inga Kogan-Zviagin; Ron N Apte; Esther Priel
Journal:  BMC Cancer       Date:  2014-12-03       Impact factor: 4.430

8.  The Dynamic Interplay Between DNA Topoisomerases and DNA Topology.

Authors:  Yeonee Seol; Keir C Neuman
Journal:  Biophys Rev       Date:  2016-07-02

9.  Insights from the Structure of Mycobacterium tuberculosis Topoisomerase I with a Novel Protein Fold.

Authors:  Kemin Tan; Nan Cao; Bokun Cheng; Andrzej Joachimiak; Yuk-Ching Tse-Dinh
Journal:  J Mol Biol       Date:  2015-12-03       Impact factor: 5.469

10.  Recovery of the poisoned topoisomerase II for DNA religation: coordinated motion of the cleavage core revealed with the microsecond atomistic simulation.

Authors:  Nan-Lan Huang; Jung-Hsin Lin
Journal:  Nucleic Acids Res       Date:  2015-07-06       Impact factor: 16.971

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