Literature DB >> 23495936

Molecular architecture and assembly of the eukaryotic proteasome.

Robert J Tomko1, Mark Hochstrasser.   

Abstract

The eukaryotic ubiquitin-proteasome system is responsible for most aspects of regulatory and quality-control protein degradation in cells. Its substrates, which are usually modified by polymers of ubiquitin, are ultimately degraded by the 26S proteasome. This 2.6-MDa protein complex is separated into a barrel-shaped proteolytic 20S core particle (CP) of 28 subunits capped on one or both ends by a 19S regulatory particle (RP) comprising at least 19 subunits. The RP coordinates substrate recognition, removal of substrate polyubiquitin chains, and substrate unfolding and translocation into the CP for degradation. Although many atomic structures of the CP have been determined, the RP has resisted high-resolution analysis. Recently, however, a combination of cryo-electron microscopy, biochemical analysis, and crystal structure determination of several RP subunits has yielded a near-atomic-resolution view of much of the complex. Major new insights into chaperone-assisted proteasome assembly have also recently emerged. Here we review these novel findings.

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Year:  2013        PMID: 23495936      PMCID: PMC3827779          DOI: 10.1146/annurev-biochem-060410-150257

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  141 in total

1.  Heterohexameric ring arrangement of the eukaryotic proteasomal ATPases: implications for proteasome structure and assembly.

Authors:  Robert J Tomko; Minoru Funakoshi; Kyle Schneider; Jimin Wang; Mark Hochstrasser
Journal:  Mol Cell       Date:  2010-05-14       Impact factor: 17.970

2.  Structure of proteasome ubiquitin receptor hRpn13 and its activation by the scaffolding protein hRpn2.

Authors:  Xiang Chen; Byung-Hoon Lee; Daniel Finley; Kylie J Walters
Journal:  Mol Cell       Date:  2010-05-14       Impact factor: 17.970

3.  Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome-ATPase interactions.

Authors:  Yadong Yu; David M Smith; Ho Min Kim; Victor Rodriguez; Alfred L Goldberg; Yifan Cheng
Journal:  EMBO J       Date:  2009-12-17       Impact factor: 11.598

4.  Subcomplexes of PA700, the 19 S regulator of the 26 S proteasome, reveal relative roles of AAA subunits in 26 S proteasome assembly and activation and ATPase activity.

Authors:  David Thompson; Kevin Hakala; George N DeMartino
Journal:  J Biol Chem       Date:  2009-07-09       Impact factor: 5.157

5.  The 20S proteasome as an assembly platform for the 19S regulatory complex.

Authors:  Klavs B Hendil; Franziska Kriegenburg; Keiji Tanaka; Shigeo Murata; Anne-Marie B Lauridsen; Anders H Johnsen; Rasmus Hartmann-Petersen
Journal:  J Mol Biol       Date:  2009-09-23       Impact factor: 5.469

6.  Structural models for interactions between the 20S proteasome and its PAN/19S activators.

Authors:  Beth M Stadtmueller; Katherine Ferrell; Frank G Whitby; Annie Heroux; Howard Robinson; David G Myszka; Christopher P Hill
Journal:  J Biol Chem       Date:  2009-11-04       Impact factor: 5.157

7.  Crystal structure of yeast rpn14, a chaperone of the 19 S regulatory particle of the proteasome.

Authors:  Sangwoo Kim; Yasushi Saeki; Keisuke Fukunaga; Atsuo Suzuki; Kenji Takagi; Takashi Yamane; Keiji Tanaka; Tsunehiro Mizushima; Koichi Kato
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

8.  Structure of a Blm10 complex reveals common mechanisms for proteasome binding and gate opening.

Authors:  Kianoush Sadre-Bazzaz; Frank G Whitby; Howard Robinson; Tim Formosa; Christopher P Hill
Journal:  Mol Cell       Date:  2010-03-12       Impact factor: 17.970

9.  Together, Rpn10 and Dsk2 can serve as a polyubiquitin chain-length sensor.

Authors:  Daoning Zhang; Tony Chen; Inbal Ziv; Rina Rosenzweig; Yulia Matiuhin; Vered Bronner; Michael H Glickman; David Fushman
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

10.  Transcription factor Nrf1 mediates the proteasome recovery pathway after proteasome inhibition in mammalian cells.

Authors:  Senthil K Radhakrishnan; Candy S Lee; Patrick Young; Anne Beskow; Jefferson Y Chan; Raymond J Deshaies
Journal:  Mol Cell       Date:  2010-04-09       Impact factor: 17.970

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  164 in total

Review 1.  The devil is in the details: comparison between COP9 signalosome (CSN) and the LID of the 26S proteasome.

Authors:  Cindy Meister; Miriam Kolog Gulko; Anna M Köhler; Gerhard H Braus
Journal:  Curr Genet       Date:  2016-02       Impact factor: 3.886

2.  Proteasomal control of cytokinin synthesis protects Mycobacterium tuberculosis against nitric oxide.

Authors:  Marie I Samanovic; Shengjiang Tu; Ondřej Novák; Lakshminarayan M Iyer; Fiona E McAllister; L Aravind; Steven P Gygi; Stevan R Hubbard; Miroslav Strnad; K Heran Darwin
Journal:  Mol Cell       Date:  2015-02-26       Impact factor: 17.970

3.  Crystal structure of human proteasome assembly chaperone PAC4 involved in proteasome formation.

Authors:  Eiji Kurimoto; Tadashi Satoh; Yuri Ito; Eri Ishihara; Kenta Okamoto; Maho Yagi-Utsumi; Keiji Tanaka; Koichi Kato
Journal:  Protein Sci       Date:  2017-03-16       Impact factor: 6.725

4.  The proteasome-associated protein Ecm29 inhibits proteasomal ATPase activity and in vivo protein degradation by the proteasome.

Authors:  Alina De La Mota-Peynado; Stella Yu-Chien Lee; Brianne Marie Pierce; Prashant Wani; Chingakham Ranjit Singh; Jeroen Roelofs
Journal:  J Biol Chem       Date:  2013-08-30       Impact factor: 5.157

5.  A conserved protein with AN1 zinc finger and ubiquitin-like domains modulates Cdc48 (p97) function in the ubiquitin-proteasome pathway.

Authors:  Bebiana Sá-Moura; Minoru Funakoshi; Robert J Tomko; R Jürgen Dohmen; Zhiping Wu; Junmin Peng; Mark Hochstrasser
Journal:  J Biol Chem       Date:  2013-10-11       Impact factor: 5.157

6.  Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis.

Authors:  Richard S Marshall; Faqiang Li; David C Gemperline; Adam J Book; Richard D Vierstra
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

Review 7.  Microautophagy regulates proteasome homeostasis.

Authors:  Jianhui Li; Mark Hochstrasser
Journal:  Curr Genet       Date:  2020-02-20       Impact factor: 3.886

8.  Adaptor-mediated Lon proteolysis restricts Bacillus subtilis hyperflagellation.

Authors:  Sampriti Mukherjee; Anna C Bree; Jing Liu; Joyce E Patrick; Peter Chien; Daniel B Kearns
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-23       Impact factor: 11.205

Review 9.  Ubiquitin-proteasome signaling in lung injury.

Authors:  Natalia D Magnani; Laura A Dada; Jacob I Sznajder
Journal:  Transl Res       Date:  2018-04-23       Impact factor: 7.012

Review 10.  Molecular and Supramolecular Structure of the Mitochondrial Oxidative Phosphorylation System: Implications for Pathology.

Authors:  Salvatore Nesci; Fabiana Trombetti; Alessandra Pagliarani; Vittoria Ventrella; Cristina Algieri; Gaia Tioli; Giorgio Lenaz
Journal:  Life (Basel)       Date:  2021-03-15
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