Literature DB >> 23494311

The application of the Cre-loxP system for generating multiple knock-out and knock-in targeted loci.

Jan Faix1, Joern Linkner, Benjamin Nordholz, James L Platt, Xin-Hua Liao, Alan R Kimmel.   

Abstract

Dictyostelium discoideum is an exceptionally powerful eukaryotic model to study many aspects of growth, development, and fundamental cellular processes. Its small-sized, haploid genome allows highly efficient targeted homologous recombination for gene disruption and knock-in epitope tagging. We previously described a robust system for the generation of multiple gene mutations in Dictyostelium by recycling the Blasticidin S selectable marker after transient expression of the Cre recombinase. We have now further optimized the system for higher efficiency and, additionally, coupled it to both, knock-out and knock-in gene targeting, allowing the characterization of multiple and cooperative gene functions in a single cell line.

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Year:  2013        PMID: 23494311     DOI: 10.1007/978-1-62703-302-2_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  A set of genes conserved in sequence and expression traces back the establishment of multicellularity in social amoebae.

Authors:  Christina Schilde; Hajara M Lawal; Angelika A Noegel; Ludwig Eichinger; Pauline Schaap; Gernot Glöckner
Journal:  BMC Genomics       Date:  2016-11-04       Impact factor: 3.969

2.  Chemotactic network responses to live bacteria show independence of phagocytosis from chemoreceptor sensing.

Authors:  Netra Pal Meena; Alan R Kimmel
Journal:  Elife       Date:  2017-05-25       Impact factor: 8.140

Review 3.  All You Need Is Fats-for Seizure Control: Using Amoeba to Advance Epilepsy Research.

Authors:  Eleanor C Warren; Matthew C Walker; Robin S B Williams
Journal:  Front Cell Neurosci       Date:  2018-07-11       Impact factor: 5.505

Review 4.  Recent Insights into NCL Protein Function Using the Model Organism Dictyostelium discoideum.

Authors:  Meagan D McLaren; Sabateeshan Mathavarajah; Robert J Huber
Journal:  Cells       Date:  2019-02-02       Impact factor: 7.666

Review 5.  Function of small GTPases in Dictyostelium macropinocytosis.

Authors:  Thomas D Williams; Peggy I Paschke; Robert R Kay
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-02-04       Impact factor: 6.237

6.  Aberrant Autophagy Impacts Growth and Multicellular Development in a Dictyostelium Knockout Model of CLN5 Disease.

Authors:  Meagan D McLaren; Sabateeshan Mathavarajah; William D Kim; Shyong Q Yap; Robert J Huber
Journal:  Front Cell Dev Biol       Date:  2021-07-05

7.  Identification of the protein kinases Pyk3 and Phg2 as regulators of the STATc-mediated response to hyperosmolarity.

Authors:  Linh Hai Vu; Tsuyoshi Araki; Jianbo Na; Christoph S Clemen; Jeffrey G Williams; Ludwig Eichinger
Journal:  PLoS One       Date:  2014-02-25       Impact factor: 3.240

Review 8.  Using the social amoeba Dictyostelium to study the functions of proteins linked to neuronal ceroid lipofuscinosis.

Authors:  Robert J Huber
Journal:  J Biomed Sci       Date:  2016-11-24       Impact factor: 12.771

9.  Functional Characterization of Ubiquitin-Like Core Autophagy Protein ATG12 in Dictyostelium discoideum.

Authors:  Sarah Fischer; Ramesh Rijal; Peter Frommolt; Prerana Wagle; Roman Konertz; Jan Faix; Susanne Meßling; Ludwig Eichinger
Journal:  Cells       Date:  2019-01-19       Impact factor: 6.600

10.  Functional Characterisation of the Autophagy ATG12~5/16 Complex in Dictyostelium discoideum.

Authors:  Malte Karow; Sarah Fischer; Susanne Meßling; Roman Konertz; Jana Riehl; Qiuhong Xiong; Ramesh Rijal; Prerana Wagle; Christoph S Clemen; Ludwig Eichinger
Journal:  Cells       Date:  2020-05-09       Impact factor: 6.600

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