Literature DB >> 23488916

Complete mitochondrial genome of the monogonont rotifer, Brachionus koreanus (Rotifera, Brachionidae).

Dae-Sik Hwang1, Koushirou Suga, Yoshitaka Sakakura, Heum Gi Park, Atsushi Hagiwara, Jae-Sung Rhee, Jae-Seong Lee.   

Abstract

The complete mitochondrial genome was obtained from the assembled genome data sequenced by next generation sequencing (NGS) technology from the monogonont rotifer Brachionus koreanus. The mitochondrial genome of B. koreanus was composed of two circular chromosomes designated as mtDNA-I (10,421 bp) and mtDNA-II (11,923 bp). The gene contents of B. koreanus were identical with previously reported B. plicatilis mitochondrial genomes. However, gene orders of B. koreanus showed one rearrangement between the two species. Of 12 protein-coding genes (PCGs), 3 genes (ATP6, ND1, and ND3) had an incomplete stop codon. The A + T base composition of B. koreanus mitochondrial genome was high (68.81%). They also showed anti-G bias (12.03% and 10.97%) on the second and third position of PCGs as well as slight anti-C bias (15.96% and 14.31%) on the first and third position of PCGs.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23488916     DOI: 10.3109/19401736.2013.775274

Source DB:  PubMed          Journal:  Mitochondrial DNA        ISSN: 1940-1736


  15 in total

1.  Mitochondrial genomes of the freshwater monogonont rotifer Brachionus fernandoi and of two additional B. calyciflorus sensu stricto lineages from Germany and the USA (Rotifera, Brachionidae).

Authors:  K Kiemel; B De Cahsan; S Paraskevopoulou; G Weithoff; R Tiedemann
Journal:  Mitochondrial DNA B Resour       Date:  2022-04-14       Impact factor: 0.610

2.  The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers.

Authors:  Wendy S Phillips; Amanda M V Brown; Dana K Howe; Amy B Peetz; Vivian C Blok; Dee R Denver; Inga A Zasada
Journal:  BMC Genomics       Date:  2016-09-05       Impact factor: 3.969

3.  The Complete Mitochondrial Genome of Aleurocanthus camelliae: Insights into Gene Arrangement and Genome Organization within the Family Aleyrodidae.

Authors:  Shi-Chun Chen; Xiao-Qing Wang; Pin-Wu Li; Xiang Hu; Jin-Jun Wang; Ping Peng
Journal:  Int J Mol Sci       Date:  2016-11-07       Impact factor: 5.923

4.  Animal Mitochondrial DNA as We Do Not Know It: mt-Genome Organization and Evolution in Nonbilaterian Lineages.

Authors:  Dennis V Lavrov; Walker Pett
Journal:  Genome Biol Evol       Date:  2016-09-26       Impact factor: 3.416

5.  Complete mitochondrial genomes of two marine monogonont rotifer Brachionus manjavacas strains.

Authors:  Min-Sub Kim; Young Hwan Lee; Duck-Hyun Kim; Hee-Jin Kim; Un-Ki Hwang; Russell Shiel; Atsushi Hagiwara; Jae-Seong Lee
Journal:  Mitochondrial DNA B Resour       Date:  2021-06-07       Impact factor: 0.658

6.  Evolution of multipartite mitochondrial genomes in the booklice of the genus Liposcelis (Psocoptera).

Authors:  Shi-Chun Chen; Dan-Dan Wei; Renfu Shao; Jun-Xia Shi; Wei Dou; Jin-Jun Wang
Journal:  BMC Genomics       Date:  2014-10-05       Impact factor: 3.969

7.  Opsin Repertoire and Expression Patterns in Horseshoe Crabs: Evidence from the Genome of Limulus polyphemus (Arthropoda: Chelicerata).

Authors:  Barbara-Anne Battelle; Joseph F Ryan; Karen E Kempler; Spencer R Saraf; Catherine E Marten; Wesley C Warren; Patrick J Minx; Michael J Montague; Pamela J Green; Skye A Schmidt; Lucinda Fulton; Nipam H Patel; Meredith E Protas; Richard K Wilson; Megan L Porter
Journal:  Genome Biol Evol       Date:  2016-06-03       Impact factor: 3.416

8.  Monogonont Rotifer, Brachionus calyciflorus, Possesses Exceptionally Large, Fragmented Mitogenome.

Authors:  Zhi-Juan Nie; Ruo-Bo Gu; Fu-Kuan Du; Nai-Lin Shao; Pao Xu; Gang-Chun Xu
Journal:  PLoS One       Date:  2016-12-13       Impact factor: 3.240

9.  Aging extension and modifications of lipid metabolism in the monogonont rotifer Brachionus koreanus under chronic caloric restriction.

Authors:  Min-Chul Lee; Jun Chul Park; Deok-Seo Yoon; Jeonghoon Han; Sujin Kang; Shohei Kamizono; Ae-Son Om; Kyung-Hoon Shin; Atsushi Hagiwara; Jae-Seong Lee
Journal:  Sci Rep       Date:  2018-01-29       Impact factor: 4.379

10.  The bipartite mitochondrial genome of Ruizia karukerae (Rhigonematomorpha, Nematoda).

Authors:  Taeho Kim; Elizabeth Kern; Chungoo Park; Steven A Nadler; Yeon Jae Bae; Joong-Ki Park
Journal:  Sci Rep       Date:  2018-05-10       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.