Literature DB >> 23476612

2-(4-Acetamido-phen-oxy)-2-methyl-propanoic acid.

Gabriel Navarrete-Vázquez1, Blanca Colín-Lozano, Hugo Tlahuext, Antonio R Tapia-Benavides.   

Abstract

In the title compound, C12H15NO4, the dihedral angle between the acetamide group and the ring is 29.6 (2)(su?)°. In the crystal mol-ecules are linked through N-H⋯O and O-H⋯O hydrogen bonds, thereby forming corrugated sheets propagating in the ac plane. These sheets are composed of R4(4)(28) graph-set motifs.

Entities:  

Year:  2013        PMID: 23476612      PMCID: PMC3588439          DOI: 10.1107/S1600536813004856

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature on analogous structures with analgesic and anti­dyslipidemic activities, see: Kis et al. (2005 ▶); Navarrete-Vázquez et al. (2008 ▶, 2011 ▶); Thorp & Waring (1962 ▶); Miller & Spence (1998 ▶); Forcheron et al. (2002 ▶). For information on hydrogen bonding, see: Bernstein et al. (1995 ▶); Jeffrey (1997 ▶); Desiraju (1996 ▶).

Experimental

Crystal data

C12H15NO4 M = 237.25 Monoclinic, a = 8.3184 (4) Å b = 13.1554 (6) Å c = 12.0452 (5) Å β = 109.959 (5)° V = 1238.96 (10) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.19 × 0.14 × 0.13 mm

Data collection

Agilent Xcalibur Atlas Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.982, T max = 0.988 34747 measured reflections 2179 independent reflections 1738 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.098 S = 1.04 2179 reflections 161 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and DIAMOND (Crystal Impact, 2006 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813004856/gw2131sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813004856/gw2131Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813004856/gw2131Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H15NO4Dx = 1.272 Mg m3
Mr = 237.25Melting point: 438 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.3184 (4) ÅCell parameters from 9500 reflections
b = 13.1554 (6) Åθ = 3.0–29.3°
c = 12.0452 (5) ŵ = 0.10 mm1
β = 109.959 (5)°T = 293 K
V = 1238.96 (10) Å3Prism, colourless
Z = 40.19 × 0.14 × 0.13 mm
F(000) = 504
Agilent Xcalibur Atlas Gemini diffractometer2179 independent reflections
Radiation source: (Mo) X-ray Source1738 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
Detector resolution: 10.3659 pixels mm-1θmax = 25.0°, θmin = 3.0°
ω scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −15→15
Tmin = 0.982, Tmax = 0.988l = −14→14
34747 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0477P)2 + 0.3201P] where P = (Fo2 + 2Fc2)/3
2179 reflections(Δ/σ)max < 0.001
161 parametersΔρmax = 0.20 e Å3
1 restraintΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.57142 (18)0.98467 (12)0.81385 (13)0.0332 (3)
C20.67842 (19)0.96019 (12)0.92728 (13)0.0350 (4)
H2A0.64330.97390.99120.042*
C30.83553 (19)0.91600 (12)0.94636 (13)0.0355 (4)
H30.90590.90061.02290.043*
C40.88934 (18)0.89431 (11)0.85144 (13)0.0320 (3)
C50.7820 (2)0.91711 (13)0.73829 (13)0.0397 (4)
H50.81650.90230.67440.048*
C60.6234 (2)0.96183 (13)0.71873 (13)0.0419 (4)
H60.55230.97640.64220.050*
C70.29399 (19)1.06405 (12)0.69952 (13)0.0347 (4)
C80.3597 (3)1.15075 (14)0.64257 (18)0.0578 (5)
H8A0.40461.20380.69950.087*
H8B0.26751.17710.57680.087*
H8C0.44841.12590.61550.087*
C90.1450 (2)1.10112 (13)0.73554 (14)0.0421 (4)
H9A0.11121.04820.77790.063*
H9B0.05041.11850.66620.063*
H9C0.17981.15990.78520.063*
C100.23247 (19)0.97382 (12)0.61524 (12)0.0349 (4)
C111.1489 (2)0.79383 (12)0.95558 (14)0.0400 (4)
C121.3223 (2)0.76481 (17)0.95380 (19)0.0633 (6)
H12A1.40780.78421.02710.095*
H12B1.34340.79900.88970.095*
H12C1.32670.69260.94340.095*
H11.099 (3)0.8691 (17)0.8137 (17)0.076*
N11.05465 (16)0.85358 (10)0.86741 (11)0.0362 (3)
O10.41935 (13)1.03044 (9)0.80935 (8)0.0390 (3)
O20.20332 (16)0.89154 (9)0.66919 (9)0.0454 (3)
H20.16740.84580.62080.068*
O30.20982 (17)0.97740 (11)0.51131 (9)0.0566 (4)
O41.09585 (17)0.76373 (10)1.03443 (11)0.0555 (4)
U11U22U33U12U13U23
C10.0302 (8)0.0358 (8)0.0335 (8)−0.0015 (6)0.0109 (6)−0.0033 (6)
C20.0367 (8)0.0422 (9)0.0286 (7)0.0008 (7)0.0145 (6)−0.0035 (7)
C30.0374 (8)0.0405 (9)0.0279 (7)0.0021 (7)0.0101 (6)−0.0001 (7)
C40.0341 (8)0.0301 (8)0.0351 (8)−0.0017 (6)0.0161 (6)0.0002 (6)
C50.0417 (9)0.0518 (10)0.0307 (8)0.0021 (8)0.0190 (7)0.0000 (7)
C60.0401 (9)0.0567 (11)0.0282 (8)0.0039 (8)0.0106 (7)0.0009 (7)
C70.0328 (8)0.0373 (9)0.0325 (8)0.0009 (7)0.0092 (6)0.0047 (7)
C80.0660 (13)0.0443 (11)0.0709 (13)−0.0051 (9)0.0333 (10)0.0093 (9)
C90.0390 (9)0.0435 (9)0.0423 (9)0.0073 (7)0.0121 (7)0.0020 (7)
C100.0314 (8)0.0453 (9)0.0281 (8)0.0011 (7)0.0105 (6)0.0036 (7)
C110.0423 (9)0.0361 (9)0.0462 (9)0.0052 (7)0.0210 (8)0.0040 (7)
C120.0519 (11)0.0667 (13)0.0807 (14)0.0208 (10)0.0346 (11)0.0217 (11)
N10.0377 (7)0.0386 (7)0.0385 (7)0.0047 (6)0.0211 (6)0.0056 (6)
O10.0312 (6)0.0541 (7)0.0295 (5)0.0068 (5)0.0073 (4)−0.0041 (5)
O20.0633 (8)0.0415 (7)0.0362 (6)−0.0136 (6)0.0231 (6)−0.0078 (5)
O30.0713 (9)0.0697 (9)0.0273 (6)−0.0061 (7)0.0149 (6)0.0010 (6)
O40.0630 (8)0.0584 (8)0.0571 (7)0.0249 (6)0.0362 (7)0.0247 (6)
C1—O11.3852 (18)C8—H8A0.9600
C1—C61.389 (2)C8—H8B0.9600
C1—C21.390 (2)C8—H8C0.9600
C2—C31.376 (2)C9—H9A0.9600
C2—H2A0.9300C9—H9B0.9600
C3—C41.392 (2)C9—H9C0.9600
C3—H30.9300C10—O31.2015 (17)
C4—C51.383 (2)C10—O21.3268 (19)
C4—N11.4264 (19)C11—O41.2410 (18)
C5—C61.389 (2)C11—N11.339 (2)
C5—H50.9300C11—C121.499 (2)
C6—H60.9300C12—H12A0.9600
C7—O11.4461 (18)C12—H12B0.9600
C7—C81.525 (2)C12—H12C0.9600
C7—C91.526 (2)N1—H10.86 (2)
C7—C101.532 (2)O2—H20.8200
O1—C1—C6126.82 (13)C7—C8—H8C109.5
O1—C1—C2114.14 (12)H8A—C8—H8C109.5
C6—C1—C2119.04 (14)H8B—C8—H8C109.5
C3—C2—C1120.99 (13)C7—C9—H9A109.5
C3—C2—H2A119.5C7—C9—H9B109.5
C1—C2—H2A119.5H9A—C9—H9B109.5
C2—C3—C4120.18 (14)C7—C9—H9C109.5
C2—C3—H3119.9H9A—C9—H9C109.5
C4—C3—H3119.9H9B—C9—H9C109.5
C5—C4—C3118.96 (14)O3—C10—O2123.53 (15)
C5—C4—N1118.86 (13)O3—C10—C7123.93 (14)
C3—C4—N1122.12 (13)O2—C10—C7112.52 (12)
C4—C5—C6121.01 (14)O4—C11—N1121.96 (14)
C4—C5—H5119.5O4—C11—C12121.67 (15)
C6—C5—H5119.5N1—C11—C12116.36 (14)
C1—C6—C5119.80 (14)C11—C12—H12A109.5
C1—C6—H6120.1C11—C12—H12B109.5
C5—C6—H6120.1H12A—C12—H12B109.5
O1—C7—C8112.51 (14)C11—C12—H12C109.5
O1—C7—C9103.87 (11)H12A—C12—H12C109.5
C8—C7—C9109.84 (14)H12B—C12—H12C109.5
O1—C7—C10110.04 (12)C11—N1—C4127.18 (12)
C8—C7—C10111.79 (13)C11—N1—H1116.3 (15)
C9—C7—C10108.42 (12)C4—N1—H1116.5 (15)
C7—C8—H8A109.5C1—O1—C7122.17 (11)
C7—C8—H8B109.5C10—O2—H2109.5
H8A—C8—H8B109.5
O1—C1—C2—C3−178.80 (14)O1—C7—C10—O243.10 (16)
C6—C1—C2—C31.4 (2)C8—C7—C10—O2168.89 (14)
C1—C2—C3—C4−0.5 (2)C9—C7—C10—O2−69.88 (16)
C2—C3—C4—C5−0.5 (2)O4—C11—N1—C42.6 (3)
C2—C3—C4—N1176.59 (14)C12—C11—N1—C4−177.66 (16)
C3—C4—C5—C60.6 (2)C5—C4—N1—C11−153.32 (16)
N1—C4—C5—C6−176.60 (15)C3—C4—N1—C1129.6 (2)
O1—C1—C6—C5178.93 (15)C6—C1—O1—C7−2.1 (2)
C2—C1—C6—C5−1.3 (2)C2—C1—O1—C7178.16 (13)
C4—C5—C6—C10.3 (3)C8—C7—O1—C1−65.53 (19)
O1—C7—C10—O3−138.24 (15)C9—C7—O1—C1175.74 (13)
C8—C7—C10—O3−12.4 (2)C10—C7—O1—C159.85 (17)
C9—C7—C10—O3108.79 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1···O2i0.87 (2)2.21 (2)3.081 (2)174 (2)
O2—H2···O4ii0.821.762.572 (2)172
C3—H3···O40.932.372.874 (2)114
C2—H2A···O1iii0.932.633.536166
C5—H5···O3iv0.932.693.333127
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O2i 0.87 (2)2.21 (2)3.081 (2)174 (2)
O2—H2⋯O4ii 0.821.762.572 (2)172
C2—H2A⋯O1iii 0.932.633.536166
C5—H5⋯O3iv 0.932.693.333127

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  8 in total

1.  Modification of metabolism and distribution of lipids by ethyl chlorophenoxyisobutyrate.

Authors:  J M THORP; W S WARING
Journal:  Nature       Date:  1962-06-09       Impact factor: 49.962

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  2-Methyl-2-(4-nitro-phen-oxy)propanoic acid.

Authors:  Gabriel Navarrete-Vázquez; Hector Torres-Gómez; Sergio Hidalgo-Figueroa; Hugo Tlahuext
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

4.  The C-h···o hydrogen bond:  structural implications and supramolecular design.

Authors:  G R Desiraju
Journal:  Acc Chem Res       Date:  1996-09       Impact factor: 22.384

Review 5.  Clinical pharmacokinetics of fibric acid derivatives (fibrates).

Authors:  D B Miller; J D Spence
Journal:  Clin Pharmacokinet       Date:  1998-02       Impact factor: 6.447

6.  Mechanisms of the triglyceride- and cholesterol-lowering effect of fenofibrate in hyperlipidemic type 2 diabetic patients.

Authors:  Fabien Forcheron; Ana Cachefo; Sylvie Thevenon; Claudie Pinteur; Michel Beylot
Journal:  Diabetes       Date:  2002-12       Impact factor: 9.461

Review 7.  Acetaminophen and the cyclooxygenase-3 puzzle: sorting out facts, fictions, and uncertainties.

Authors:  Bela Kis; James A Snipes; David W Busija
Journal:  J Pharmacol Exp Ther       Date:  2005-05-06       Impact factor: 4.030

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  1 in total

1.  Synthesis, In Vitro, In Vivo and In Silico Antidiabetic Bioassays of 4-Nitro(thio)phenoxyisobutyric Acids Acting as Unexpected PPARγ Modulators: An In Combo Study.

Authors:  Blanca Colin-Lozano; Héctor Torres-Gomez; Sergio Hidalgo-Figueroa; Fabiola Chávez-Silva; Samuel Estrada-Soto; Julio Cesar Almanza-Pérez; Gabriel Navarrete-Vazquez
Journal:  Pharmaceuticals (Basel)       Date:  2022-01-15
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.