| Literature DB >> 23476605 |
Rashad Al-Salahi1, Mohamed Marzouk, Mohamed A Al-Omar, Abd El-Galil E Amr, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C10H8N4S2, comprising fused six-, six- and five-membered rings, the mol-ecule is close to being planar (r.m.s. deviation of the non-H atoms = 0.041 Å). The S-bound methyl group is folded away from the single N atom of the triazole ring and the NH group of the six-membered ring, allowing for the formation of centrosymmetric eight-membered {⋯HNCN}2 synthons in the crystal. The resulting inversion dimers are connected into supra-molecular stacks aligned along the b-axis direction by π-π inter-actions [centroid-centroid distances = 3.6531 (12) and 3.7182 (12) Å].Entities:
Year: 2013 PMID: 23476605 PMCID: PMC3588520 DOI: 10.1107/S1600536813004881
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8N4S2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1314 reflections |
| θ = 3.1–27.5° | |
| µ = 0.49 mm−1 | |
| β = 99.127 (10)° | Prism, yellow |
| 0.30 × 0.15 × 0.05 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 2389 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 1667 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 3.1° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 5096 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2389 reflections | (Δ/σ)max = 0.001 |
| 149 parameters | Δρmax = 0.28 e Å−3 |
| 1 restraint | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.57415 (5) | 0.09061 (12) | 0.69579 (3) | 0.03633 (18) | |
| S2 | 0.69330 (6) | 1.14441 (14) | 0.43364 (3) | 0.0455 (2) | |
| N1 | 0.63890 (16) | 0.7597 (4) | 0.51388 (8) | 0.0334 (4) | |
| H1 | 0.5735 (15) | 0.728 (5) | 0.4828 (9) | 0.052 (7)* | |
| N2 | 0.75333 (14) | 0.6491 (3) | 0.61961 (8) | 0.0288 (4) | |
| N3 | 0.74549 (16) | 0.4772 (3) | 0.67308 (8) | 0.0309 (4) | |
| N4 | 0.57690 (15) | 0.4139 (4) | 0.58757 (8) | 0.0325 (4) | |
| C1 | 0.72154 (19) | 0.9632 (4) | 0.50311 (10) | 0.0316 (5) | |
| C2 | 0.83231 (19) | 1.0021 (4) | 0.55680 (10) | 0.0306 (5) | |
| C3 | 0.92564 (19) | 1.1992 (5) | 0.55164 (11) | 0.0363 (5) | |
| H3 | 0.9169 | 1.3102 | 0.5138 | 0.044* | |
| C4 | 1.0296 (2) | 1.2317 (5) | 0.60125 (11) | 0.0403 (6) | |
| H4 | 1.0906 | 1.3640 | 0.5970 | 0.048* | |
| C5 | 1.04387 (19) | 1.0665 (5) | 0.65804 (11) | 0.0385 (5) | |
| H5 | 1.1151 | 1.0883 | 0.6914 | 0.046* | |
| C6 | 0.95443 (19) | 0.8723 (4) | 0.66552 (10) | 0.0358 (5) | |
| H6 | 0.9644 | 0.7626 | 0.7036 | 0.043* | |
| C7 | 0.84829 (18) | 0.8415 (4) | 0.61517 (10) | 0.0292 (5) | |
| C8 | 0.65228 (18) | 0.6076 (4) | 0.57102 (9) | 0.0294 (5) | |
| C9 | 0.63785 (18) | 0.3432 (4) | 0.65066 (10) | 0.0296 (5) | |
| C10 | 0.6908 (2) | 0.0885 (5) | 0.77103 (11) | 0.0474 (6) | |
| H10A | 0.6676 | −0.0456 | 0.8016 | 0.071* | |
| H10B | 0.6935 | 0.2637 | 0.7920 | 0.071* | |
| H10C | 0.7738 | 0.0461 | 0.7599 | 0.071* |
| S1 | 0.0370 (3) | 0.0390 (4) | 0.0320 (3) | −0.0018 (3) | 0.0023 (2) | 0.0034 (3) |
| S2 | 0.0496 (4) | 0.0525 (4) | 0.0330 (3) | −0.0007 (3) | 0.0019 (3) | 0.0110 (3) |
| N1 | 0.0337 (9) | 0.0388 (11) | 0.0247 (9) | −0.0014 (9) | −0.0046 (8) | 0.0023 (8) |
| N2 | 0.0291 (8) | 0.0321 (10) | 0.0237 (8) | 0.0019 (8) | −0.0006 (7) | 0.0006 (8) |
| N3 | 0.0339 (9) | 0.0321 (10) | 0.0256 (9) | 0.0011 (8) | 0.0015 (7) | 0.0028 (8) |
| N4 | 0.0328 (9) | 0.0369 (11) | 0.0266 (9) | 0.0011 (9) | 0.0007 (7) | 0.0016 (8) |
| C1 | 0.0351 (11) | 0.0320 (12) | 0.0285 (11) | 0.0054 (10) | 0.0070 (9) | −0.0012 (9) |
| C2 | 0.0329 (10) | 0.0314 (12) | 0.0282 (11) | 0.0062 (10) | 0.0069 (9) | −0.0035 (9) |
| C3 | 0.0380 (11) | 0.0367 (13) | 0.0354 (12) | −0.0001 (11) | 0.0091 (10) | −0.0006 (10) |
| C4 | 0.0366 (12) | 0.0394 (14) | 0.0457 (13) | −0.0061 (11) | 0.0090 (10) | −0.0064 (12) |
| C5 | 0.0306 (11) | 0.0436 (14) | 0.0387 (12) | 0.0001 (11) | −0.0024 (10) | −0.0089 (11) |
| C6 | 0.0363 (11) | 0.0380 (13) | 0.0313 (11) | 0.0050 (10) | −0.0007 (9) | −0.0009 (10) |
| C7 | 0.0287 (10) | 0.0304 (11) | 0.0283 (11) | 0.0020 (9) | 0.0044 (8) | −0.0040 (9) |
| C8 | 0.0316 (10) | 0.0316 (12) | 0.0234 (10) | 0.0038 (10) | −0.0007 (8) | −0.0027 (9) |
| C9 | 0.0310 (10) | 0.0302 (12) | 0.0270 (10) | 0.0044 (10) | 0.0029 (9) | −0.0020 (9) |
| C10 | 0.0511 (14) | 0.0587 (17) | 0.0299 (12) | −0.0044 (13) | −0.0007 (10) | 0.0097 (12) |
| S1—C9 | 1.738 (2) | C2—C3 | 1.399 (3) |
| S1—C10 | 1.791 (2) | C2—C7 | 1.403 (3) |
| S2—C1 | 1.645 (2) | C3—C4 | 1.369 (3) |
| N1—C8 | 1.360 (2) | C3—H3 | 0.9300 |
| N1—C1 | 1.369 (3) | C4—C5 | 1.391 (3) |
| N1—H1 | 0.868 (10) | C4—H4 | 0.9300 |
| N2—C8 | 1.342 (2) | C5—C6 | 1.369 (3) |
| N2—N3 | 1.381 (2) | C5—H5 | 0.9300 |
| N2—C7 | 1.392 (2) | C6—C7 | 1.393 (3) |
| N3—C9 | 1.329 (2) | C6—H6 | 0.9300 |
| N4—C8 | 1.319 (3) | C10—H10A | 0.9600 |
| N4—C9 | 1.372 (2) | C10—H10B | 0.9600 |
| C1—C2 | 1.471 (3) | C10—H10C | 0.9600 |
| C9—S1—C10 | 100.05 (10) | C6—C5—C4 | 120.89 (19) |
| C8—N1—C1 | 123.68 (17) | C6—C5—H5 | 119.6 |
| C8—N1—H1 | 118.3 (16) | C4—C5—H5 | 119.6 |
| C1—N1—H1 | 118.0 (16) | C5—C6—C7 | 119.0 (2) |
| C8—N2—N3 | 109.51 (16) | C5—C6—H6 | 120.5 |
| C8—N2—C7 | 123.58 (17) | C7—C6—H6 | 120.5 |
| N3—N2—C7 | 126.91 (15) | C6—C7—N2 | 122.05 (19) |
| C9—N3—N2 | 101.24 (15) | C6—C7—C2 | 121.4 (2) |
| C8—N4—C9 | 101.80 (16) | N2—C7—C2 | 116.50 (17) |
| N1—C1—C2 | 115.51 (18) | N4—C8—N2 | 111.57 (18) |
| N1—C1—S2 | 119.93 (15) | N4—C8—N1 | 128.80 (17) |
| C2—C1—S2 | 124.56 (17) | N2—C8—N1 | 119.63 (19) |
| C3—C2—C7 | 117.51 (18) | N3—C9—N4 | 115.88 (18) |
| C3—C2—C1 | 121.46 (19) | N3—C9—S1 | 124.04 (15) |
| C7—C2—C1 | 121.0 (2) | N4—C9—S1 | 120.09 (15) |
| C4—C3—C2 | 121.2 (2) | S1—C10—H10A | 109.5 |
| C4—C3—H3 | 119.4 | S1—C10—H10B | 109.5 |
| C2—C3—H3 | 119.4 | H10A—C10—H10B | 109.5 |
| C3—C4—C5 | 119.9 (2) | S1—C10—H10C | 109.5 |
| C3—C4—H4 | 120.0 | H10A—C10—H10C | 109.5 |
| C5—C4—H4 | 120.0 | H10B—C10—H10C | 109.5 |
| C8—N2—N3—C9 | 0.5 (2) | C3—C2—C7—C6 | −1.4 (3) |
| C7—N2—N3—C9 | 179.49 (18) | C1—C2—C7—C6 | 178.41 (19) |
| C8—N1—C1—C2 | 2.8 (3) | C3—C2—C7—N2 | 179.17 (17) |
| C8—N1—C1—S2 | −177.27 (16) | C1—C2—C7—N2 | −1.0 (3) |
| N1—C1—C2—C3 | 178.67 (19) | C9—N4—C8—N2 | 1.2 (2) |
| S2—C1—C2—C3 | −1.3 (3) | C9—N4—C8—N1 | −178.6 (2) |
| N1—C1—C2—C7 | −1.2 (3) | N3—N2—C8—N4 | −1.2 (2) |
| S2—C1—C2—C7 | 178.89 (16) | C7—N2—C8—N4 | 179.82 (17) |
| C7—C2—C3—C4 | 0.9 (3) | N3—N2—C8—N1 | 178.65 (17) |
| C1—C2—C3—C4 | −178.9 (2) | C7—N2—C8—N1 | −0.4 (3) |
| C2—C3—C4—C5 | 0.1 (3) | C1—N1—C8—N4 | 177.7 (2) |
| C3—C4—C5—C6 | −0.6 (3) | C1—N1—C8—N2 | −2.1 (3) |
| C4—C5—C6—C7 | 0.1 (3) | N2—N3—C9—N4 | 0.3 (2) |
| C5—C6—C7—N2 | −179.68 (19) | N2—N3—C9—S1 | 179.79 (14) |
| C5—C6—C7—C2 | 1.0 (3) | C8—N4—C9—N3 | −0.9 (2) |
| C8—N2—C7—C6 | −177.57 (19) | C8—N4—C9—S1 | 179.53 (15) |
| N3—N2—C7—C6 | 3.6 (3) | C10—S1—C9—N3 | 0.4 (2) |
| C8—N2—C7—C2 | 1.8 (3) | C10—S1—C9—N4 | 179.93 (17) |
| N3—N2—C7—C2 | −177.02 (18) |
| H··· | ||||
| N1—H1···N4i | 0.87 (1) | 2.07 (1) | 2.931 (2) | 171 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯N4i | 0.87 (1) | 2.07 (1) | 2.931 (2) | 171 (2) |
Symmetry code: (i) .