| Literature DB >> 23476570 |
Megan M Breiner1, David E Chavez, Damon A Parrish.
Abstract
The title compound, C3H5N3O8, was synthesized by reacting 2-nitro-propane-1,3-diol with acetyl nitrate. The mol-ecule is bisected by a crystallograpic mirror plane. In the crystal, the mol-ecules pack in a ribbon-like fashion along the c axis, with the central nitro groups pointing in the same direction. C-H⋯O contacts apparently provide some additional packing stabilization.Entities:
Year: 2013 PMID: 23476570 PMCID: PMC3588449 DOI: 10.1107/S1600536813004170
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C3H5N3O8 | |
| Orthorhombic, | Mo |
| µ = 0.18 mm−1 | |
| Needle, colourless | |
| 0.38 × 0.02 × 0.01 mm | |
| Bruker SMART APEXII CCD diffractometer | 841 independent reflections |
| Radiation source: fine focus sealed tube | 587 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 26.3°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 3416 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 841 reflections | (Δ/σ)max < 0.001 |
| 70 parameters | Δρmax = 0.15 e Å−3 |
| 1 restraint | Δρmin = −0.18 e Å−3 |
| Experimental. Acetic acid (6.25 ml) and acetic anhydride (6.25 ml) were added to a 50 ml jacketed flask. The solution was then cooled to 0 degress C and HNO3 (4.25 g, 98%) was added dropwise while maintaining the reaction temperature below 5 degrees C. The reaction was allowed to stir for 20 min. and 2-nitro-1,3-propanediol (1.51 g, 12.5 mmol) was added. After stirring for 2 h at 0 degrees C, the temperature was raised to 20 degrees C over one hour and then stirred at 20 degrees C for an additional hour The reaction mixture was then poured into 25 ml of ice water and stirred. The white solid was filtered and washed with water and air dried to give 2.19 g of crude 1. This material was then recrystallized from carbon tetrachloride to give white needles. The melting point was measured to be 68–69 degrees C. IR analysis (KBr), proton NMR analysis (300 MHz, deuterioacetone), and elemental analysis were also performed for additional characterization. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.5000 | 0.2314 (4) | 0.4290 (7) | 0.0314 (8) | |
| H1 | 0.5000 | 0.1318 | 0.3932 | 0.038* | |
| N2 | 0.5000 | 0.2530 (4) | 0.6828 (6) | 0.0392 (8) | |
| O3 | 0.5000 | 0.1504 (4) | 0.8026 (5) | 0.0743 (10) | |
| O4 | 0.5000 | 0.3716 (4) | 0.7543 (5) | 0.0606 (9) | |
| C5 | 0.58746 (15) | 0.3011 (3) | 0.3296 (5) | 0.0386 (6) | |
| H5A | 0.5877 | 0.2874 | 0.1669 | 0.046* | |
| H5B | 0.5839 | 0.4004 | 0.3581 | 0.046* | |
| O6 | 0.67514 (11) | 0.24806 (16) | 0.4225 (4) | 0.0404 (5) | |
| N7 | 0.70956 (17) | 0.1273 (2) | 0.3130 (4) | 0.0429 (6) | |
| O8 | 0.65815 (14) | 0.07181 (19) | 0.1797 (5) | 0.0614 (6) | |
| O9 | 0.78766 (13) | 0.0968 (2) | 0.3745 (4) | 0.0611 (7) |
| C1 | 0.0337 (18) | 0.028 (2) | 0.032 (2) | 0.000 | 0.000 | −0.0047 (17) |
| N2 | 0.0324 (16) | 0.045 (2) | 0.040 (2) | 0.000 | 0.000 | −0.004 (2) |
| O3 | 0.105 (3) | 0.071 (2) | 0.047 (2) | 0.000 | 0.000 | 0.0159 (19) |
| O4 | 0.065 (2) | 0.057 (2) | 0.060 (2) | 0.000 | 0.000 | −0.0235 (17) |
| C5 | 0.0322 (14) | 0.0359 (14) | 0.0477 (17) | 0.0026 (11) | 0.0018 (13) | 0.0015 (14) |
| O6 | 0.0318 (9) | 0.0415 (11) | 0.0480 (11) | 0.0025 (8) | −0.0019 (9) | −0.0094 (10) |
| N7 | 0.0355 (12) | 0.0428 (14) | 0.0505 (14) | 0.0019 (12) | 0.0096 (12) | 0.0041 (13) |
| O8 | 0.0554 (13) | 0.0563 (14) | 0.0725 (15) | 0.0030 (11) | 0.0032 (14) | −0.0254 (15) |
| O9 | 0.0359 (11) | 0.0679 (15) | 0.0796 (17) | 0.0153 (9) | 0.0032 (11) | 0.0177 (12) |
| C1—N2 | 1.512 (6) | C5—O6 | 1.441 (3) |
| C1—C5 | 1.517 (3) | C5—H5A | 0.9700 |
| C1—C5i | 1.517 (3) | C5—H5B | 0.9700 |
| C1—H1 | 0.9800 | O6—N7 | 1.413 (3) |
| N2—O3 | 1.213 (4) | N7—O9 | 1.192 (3) |
| N2—O4 | 1.215 (4) | N7—O8 | 1.194 (3) |
| N2—C1—C5 | 108.8 (2) | O6—C5—H5A | 109.0 |
| N2—C1—C5i | 108.8 (2) | C1—C5—H5A | 109.0 |
| C5—C1—C5i | 108.2 (3) | O6—C5—H5B | 109.0 |
| N2—C1—H1 | 110.3 | C1—C5—H5B | 109.0 |
| C5—C1—H1 | 110.3 | H5A—C5—H5B | 107.8 |
| C5i—C1—H1 | 110.3 | N7—O6—C5 | 114.1 (2) |
| O3—N2—O4 | 124.0 (4) | O9—N7—O8 | 130.4 (2) |
| O3—N2—C1 | 117.8 (3) | O9—N7—O6 | 112.1 (2) |
| O4—N2—C1 | 118.2 (3) | O8—N7—O6 | 117.5 (2) |
| O6—C5—C1 | 112.9 (2) | ||
| C5—C1—N2—O3 | −121.2 (2) | C5i—C1—C5—O6 | 176.71 (15) |
| C5i—C1—N2—O3 | 121.2 (2) | C1—C5—O6—N7 | 85.4 (3) |
| C5—C1—N2—O4 | 58.8 (2) | C5—O6—N7—O9 | 171.0 (2) |
| C5i—C1—N2—O4 | −58.8 (2) | C5—O6—N7—O8 | −9.7 (3) |
| N2—C1—C5—O6 | 58.6 (3) |
| H··· | ||||
| C5—H5 | 0.97 | 2.56 | 3.405 (5) | 145 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C5—H5 | 0.97 | 2.56 | 3.405 (5) | 145 |
Symmetry code: (i) .