| Literature DB >> 23476562 |
Christine Franzel1, Andrew Purdy, Ray J Butcher.
Abstract
The title compound, C9H12N2OS4·0.5C6H5Cl, which contains two 1,3-thia-zolidine-2-thione rings, is a by-product of the synthesis of 3-acryloyl-1,3-thia-zolidine-2-thione. The dihedral angle between these rings is 79.95 (9)°, with both rings displaying a twisted conformation. The twist angle of the amide group is 5.6 (1)°. In the crystal, the molecules are linked into [001] chains by C-H⋯O interactions. The chloro-benzene solvent mol-ecule was found to show unresolvable disorder about a centre of inversion and its contribution to the scattering was removed with the SQUEEZE option in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148-155].Entities:
Year: 2013 PMID: 23476562 PMCID: PMC3588431 DOI: 10.1107/S1600536813003292
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H12N2OS4·0.5C6H5Cl | |
| Monoclinic, | Cu |
| Cell parameters from 2930 reflections | |
| θ = 4.7–75.6° | |
| µ = 6.68 mm−1 | |
| β = 92.614 (2)° | |
| Prism, colorless | |
| 0.45 × 0.25 × 0.14 mm |
| Agilent Xcalibur (Ruby, Gemini) diffractometer | 2971 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 2486 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 75.8°, θmin = 4.9° |
| ω scans | |
| Absorption correction: multi-scan [ | |
| 5329 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2971 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.44 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Experimental. CrysAlisPro, Agilent Technologies, Version 1.171.35.21 (release 20-01-2012 CrysAlis171 .NET) (compiled Jan 23 2012,18:06:46) Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by R.C. Clark & J.S. Reid. (Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.38391 (7) | 0.58687 (8) | 0.30163 (4) | 0.02748 (18) | |
| S2 | 0.16697 (8) | 0.60275 (8) | 0.17409 (4) | 0.02960 (19) | |
| S3 | 0.75412 (7) | 0.06152 (7) | 0.39778 (4) | 0.02613 (18) | |
| S4 | 1.01178 (8) | 0.25235 (8) | 0.44956 (4) | 0.02741 (18) | |
| O1 | 0.5444 (2) | 0.2367 (2) | 0.15272 (10) | 0.0247 (4) | |
| N1 | 0.3858 (2) | 0.4161 (2) | 0.17961 (11) | 0.0194 (4) | |
| N2 | 0.8680 (3) | 0.2837 (2) | 0.32473 (12) | 0.0232 (5) | |
| C1 | 0.3274 (3) | 0.5256 (3) | 0.22011 (14) | 0.0210 (5) | |
| C2 | 0.1553 (4) | 0.4708 (4) | 0.10302 (18) | 0.0398 (8) | |
| H2A | 0.0692 | 0.4039 | 0.1114 | 0.048* | |
| H2B | 0.1363 | 0.5160 | 0.0545 | 0.048* | |
| C3 | 0.3092 (3) | 0.3939 (3) | 0.10594 (14) | 0.0235 (5) | |
| H3A | 0.2922 | 0.2915 | 0.0971 | 0.028* | |
| H3B | 0.3762 | 0.4309 | 0.0676 | 0.028* | |
| C4 | 0.5170 (3) | 0.3302 (3) | 0.19528 (14) | 0.0193 (5) | |
| C5 | 0.6201 (3) | 0.3555 (3) | 0.26305 (13) | 0.0180 (5) | |
| H5A | 0.5621 | 0.3338 | 0.3073 | 0.022* | |
| H5B | 0.6522 | 0.4561 | 0.2653 | 0.022* | |
| C6 | 0.7637 (3) | 0.2609 (3) | 0.26076 (14) | 0.0254 (5) | |
| H6A | 0.7308 | 0.1604 | 0.2590 | 0.030* | |
| H6B | 0.8196 | 0.2815 | 0.2158 | 0.030* | |
| C7 | 0.8692 (3) | 0.2009 (3) | 0.38392 (13) | 0.0195 (5) | |
| C8 | 1.0683 (4) | 0.4060 (4) | 0.39771 (18) | 0.0404 (8) | |
| H8A | 1.0306 | 0.4937 | 0.4206 | 0.048* | |
| H8B | 1.1831 | 0.4111 | 0.3959 | 0.048* | |
| C9 | 0.9945 (4) | 0.3887 (3) | 0.32101 (18) | 0.0355 (7) | |
| H9A | 0.9523 | 0.4804 | 0.3030 | 0.043* | |
| H9B | 1.0732 | 0.3558 | 0.2869 | 0.043* |
| S1 | 0.0230 (3) | 0.0325 (4) | 0.0272 (3) | 0.0043 (3) | 0.0034 (2) | −0.0095 (3) |
| S2 | 0.0241 (3) | 0.0368 (4) | 0.0281 (3) | 0.0123 (3) | 0.0033 (2) | −0.0017 (3) |
| S3 | 0.0224 (3) | 0.0275 (3) | 0.0290 (3) | −0.0045 (2) | 0.0071 (2) | −0.0041 (3) |
| S4 | 0.0287 (3) | 0.0288 (4) | 0.0242 (3) | −0.0057 (3) | −0.0048 (2) | 0.0034 (3) |
| O1 | 0.0292 (9) | 0.0204 (9) | 0.0244 (9) | 0.0041 (8) | 0.0012 (7) | −0.0059 (7) |
| N1 | 0.0190 (9) | 0.0212 (10) | 0.0180 (9) | −0.0019 (8) | 0.0027 (7) | 0.0001 (8) |
| N2 | 0.0277 (11) | 0.0201 (11) | 0.0216 (10) | 0.0042 (9) | −0.0003 (8) | −0.0007 (8) |
| C1 | 0.0167 (11) | 0.0217 (12) | 0.0252 (12) | −0.0014 (9) | 0.0066 (9) | 0.0029 (10) |
| C2 | 0.0347 (16) | 0.0485 (19) | 0.0350 (16) | 0.0171 (15) | −0.0120 (13) | −0.0150 (14) |
| C3 | 0.0253 (12) | 0.0265 (13) | 0.0189 (12) | 0.0016 (11) | 0.0019 (9) | −0.0003 (10) |
| C4 | 0.0189 (11) | 0.0175 (11) | 0.0218 (12) | −0.0024 (9) | 0.0053 (9) | 0.0025 (9) |
| C5 | 0.0201 (11) | 0.0170 (11) | 0.0170 (11) | 0.0000 (9) | 0.0024 (9) | 0.0004 (9) |
| C6 | 0.0257 (12) | 0.0271 (14) | 0.0228 (12) | 0.0075 (11) | −0.0038 (10) | −0.0027 (11) |
| C7 | 0.0157 (10) | 0.0224 (12) | 0.0205 (11) | 0.0063 (9) | 0.0019 (9) | −0.0045 (9) |
| C8 | 0.0521 (19) | 0.0308 (16) | 0.0373 (17) | −0.0188 (14) | −0.0080 (14) | 0.0101 (13) |
| C9 | 0.0443 (17) | 0.0287 (15) | 0.0327 (15) | −0.0086 (13) | −0.0064 (13) | 0.0085 (12) |
| S1—C1 | 1.650 (3) | C2—H2B | 0.9900 |
| S2—C1 | 1.741 (3) | C3—H3A | 0.9900 |
| S2—C2 | 1.799 (3) | C3—H3B | 0.9900 |
| S3—C7 | 1.673 (3) | C4—C5 | 1.508 (3) |
| S4—C7 | 1.744 (3) | C5—C6 | 1.526 (3) |
| S4—C8 | 1.811 (3) | C5—H5A | 0.9900 |
| O1—C4 | 1.206 (3) | C5—H5B | 0.9900 |
| N1—C1 | 1.379 (3) | C6—H6A | 0.9900 |
| N1—C4 | 1.408 (3) | C6—H6B | 0.9900 |
| N1—C3 | 1.486 (3) | C8—C9 | 1.520 (4) |
| N2—C7 | 1.334 (4) | C8—H8A | 0.9900 |
| N2—C6 | 1.456 (3) | C8—H8B | 0.9900 |
| N2—C9 | 1.475 (4) | C9—H9A | 0.9900 |
| C2—C3 | 1.508 (4) | C9—H9B | 0.9900 |
| C2—H2A | 0.9900 | ||
| C1—S2—C2 | 94.31 (13) | C4—C5—H5A | 109.8 |
| C7—S4—C8 | 93.47 (14) | C6—C5—H5A | 109.8 |
| C1—N1—C4 | 129.1 (2) | C4—C5—H5B | 109.8 |
| C1—N1—C3 | 115.8 (2) | C6—C5—H5B | 109.8 |
| C4—N1—C3 | 114.9 (2) | H5A—C5—H5B | 108.3 |
| C7—N2—C6 | 123.1 (2) | N2—C6—C5 | 111.2 (2) |
| C7—N2—C9 | 116.9 (2) | N2—C6—H6A | 109.4 |
| C6—N2—C9 | 119.4 (2) | C5—C6—H6A | 109.4 |
| N1—C1—S1 | 130.4 (2) | N2—C6—H6B | 109.4 |
| N1—C1—S2 | 110.76 (19) | C5—C6—H6B | 109.4 |
| S1—C1—S2 | 118.87 (15) | H6A—C6—H6B | 108.0 |
| C3—C2—S2 | 106.8 (2) | N2—C7—S3 | 127.0 (2) |
| C3—C2—H2A | 110.4 | N2—C7—S4 | 111.9 (2) |
| S2—C2—H2A | 110.4 | S3—C7—S4 | 121.13 (15) |
| C3—C2—H2B | 110.4 | C9—C8—S4 | 106.6 (2) |
| S2—C2—H2B | 110.4 | C9—C8—H8A | 110.4 |
| H2A—C2—H2B | 108.6 | S4—C8—H8A | 110.4 |
| N1—C3—C2 | 108.4 (2) | C9—C8—H8B | 110.4 |
| N1—C3—H3A | 110.0 | S4—C8—H8B | 110.4 |
| C2—C3—H3A | 110.0 | H8A—C8—H8B | 108.6 |
| N1—C3—H3B | 110.0 | N2—C9—C8 | 107.9 (2) |
| C2—C3—H3B | 110.0 | N2—C9—H9A | 110.1 |
| H3A—C3—H3B | 108.4 | C8—C9—H9A | 110.1 |
| O1—C4—N1 | 117.9 (2) | N2—C9—H9B | 110.1 |
| O1—C4—C5 | 121.4 (2) | C8—C9—H9B | 110.1 |
| N1—C4—C5 | 120.7 (2) | H9A—C9—H9B | 108.4 |
| C4—C5—C6 | 109.3 (2) | ||
| C4—N1—C1—S1 | −3.8 (4) | N1—C4—C5—C6 | −172.5 (2) |
| C3—N1—C1—S1 | −177.4 (2) | C7—N2—C6—C5 | 97.3 (3) |
| C4—N1—C1—S2 | 177.3 (2) | C9—N2—C6—C5 | −92.1 (3) |
| C3—N1—C1—S2 | 3.7 (3) | C4—C5—C6—N2 | 179.0 (2) |
| C2—S2—C1—N1 | 8.0 (2) | C6—N2—C7—S3 | −1.3 (4) |
| C2—S2—C1—S1 | −170.96 (19) | C9—N2—C7—S3 | −172.1 (2) |
| C1—S2—C2—C3 | −16.8 (3) | C6—N2—C7—S4 | 177.92 (19) |
| C1—N1—C3—C2 | −16.4 (3) | C9—N2—C7—S4 | 7.1 (3) |
| C4—N1—C3—C2 | 169.0 (2) | C8—S4—C7—N2 | 4.2 (2) |
| S2—C2—C3—N1 | 20.6 (3) | C8—S4—C7—S3 | −176.58 (19) |
| C1—N1—C4—O1 | 177.7 (2) | C7—S4—C8—C9 | −13.2 (3) |
| C3—N1—C4—O1 | −8.6 (3) | C7—N2—C9—C8 | −17.1 (4) |
| C1—N1—C4—C5 | −2.6 (4) | C6—N2—C9—C8 | 171.7 (3) |
| C3—N1—C4—C5 | 171.0 (2) | S4—C8—C9—N2 | 18.3 (3) |
| O1—C4—C5—C6 | 7.2 (3) |
| H··· | ||||
| C9—H9 | 0.99 | 2.55 | 3.340 (4) | 137 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C9—H9 | 0.99 | 2.55 | 3.340 (4) | 137 |
Symmetry code: (i) .