| Literature DB >> 23476542 |
Ola K Sakka1, Daisy H Fleita, William T A Harrison.
Abstract
In the title compound, C12H7N3OS, the essentially planar thia-zole ring (r.m.s. deviation = 0.022 Å) forms dihedral angles of 84.88 (9) and 1.8 (3)° with the phenyl ring and the -C(CN)2 group (r.m.s. deviation = 0.003 Å), respectively. The mol-ecule has approximate local Cs symmetry. In the crystal, molecules are linked via C-H⋯N hydrogen bonds, forming chains propagating along [101]. The crystal studied was found to be an inversion twin with a refined 0.63 (1):0.37 (1) domain ratio.Entities:
Year: 2013 PMID: 23476542 PMCID: PMC3588553 DOI: 10.1107/S160053681300216X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H7N3OS | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 1133 reflections |
| θ = 2.9–27.5° | |
| µ = 0.27 mm−1 | |
| β = 104.199 (4)° | Block, yellow |
| 0.20 × 0.13 × 0.05 mm | |
| Nonius KappaCCD diffractometer | 1397 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 27.5°, θmin = 3.6° |
| ω scans | |
| 2136 measured reflections | |
| 2136 independent reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.17 e Å−3 | |
| 2136 reflections | Δρmin = −0.18 e Å−3 |
| 156 parameters | Extinction correction: |
| 2 restraints | Extinction coefficient: 0.008 (2) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 835 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.37 (1) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.40086 (17) | 0.3723 (3) | 0.3314 (5) | 0.0435 (8) | |
| C2 | 0.31911 (18) | 0.3591 (4) | 0.3709 (4) | 0.0542 (9) | |
| H2A | 0.2827 | 0.3104 | 0.2657 | 0.065* | |
| H2B | 0.2969 | 0.4511 | 0.3830 | 0.065* | |
| C3 | 0.43425 (18) | 0.2567 (3) | 0.6297 (4) | 0.0357 (7) | |
| C4 | 0.48151 (17) | 0.1984 (3) | 0.7933 (4) | 0.0395 (8) | |
| C5 | 0.4414 (2) | 0.1387 (4) | 0.9303 (5) | 0.0487 (8) | |
| C6 | 0.5676 (2) | 0.1857 (3) | 0.8434 (5) | 0.0444 (8) | |
| C7 | 0.54465 (17) | 0.3210 (3) | 0.4754 (4) | 0.0368 (7) | |
| C8 | 0.58860 (18) | 0.4396 (4) | 0.5395 (4) | 0.0465 (8) | |
| H8 | 0.5650 | 0.5143 | 0.5884 | 0.056* | |
| C9 | 0.6685 (2) | 0.4455 (5) | 0.5297 (5) | 0.0669 (11) | |
| H9 | 0.6994 | 0.5242 | 0.5746 | 0.080* | |
| C10 | 0.7026 (2) | 0.3359 (5) | 0.4543 (5) | 0.0689 (13) | |
| H10 | 0.7563 | 0.3411 | 0.4470 | 0.083* | |
| C11 | 0.6581 (2) | 0.2197 (5) | 0.3901 (5) | 0.0657 (12) | |
| H11 | 0.6816 | 0.1456 | 0.3394 | 0.079* | |
| C12 | 0.5784 (2) | 0.2111 (4) | 0.3998 (4) | 0.0534 (10) | |
| H12 | 0.5480 | 0.1318 | 0.3557 | 0.064* | |
| S1 | 0.32943 (5) | 0.26310 (9) | 0.59038 (11) | 0.0515 (3) | |
| O1 | 0.41623 (12) | 0.4253 (2) | 0.1924 (3) | 0.0585 (7) | |
| N1 | 0.46104 (13) | 0.3139 (3) | 0.4828 (3) | 0.0363 (6) | |
| N2 | 0.40992 (18) | 0.0906 (3) | 1.0384 (5) | 0.0703 (9) | |
| N3 | 0.63584 (18) | 0.1710 (3) | 0.8969 (4) | 0.0671 (9) |
| C1 | 0.0331 (18) | 0.039 (2) | 0.0570 (19) | −0.0008 (15) | 0.0092 (15) | −0.0014 (17) |
| C2 | 0.036 (2) | 0.071 (3) | 0.0535 (19) | 0.0005 (17) | 0.0065 (14) | 0.0031 (18) |
| C3 | 0.0287 (16) | 0.0350 (19) | 0.0452 (17) | −0.0036 (15) | 0.0126 (13) | −0.0012 (14) |
| C4 | 0.0327 (18) | 0.042 (2) | 0.0459 (19) | 0.0010 (14) | 0.0142 (15) | 0.0074 (15) |
| C5 | 0.0362 (19) | 0.050 (2) | 0.0577 (19) | 0.0011 (16) | 0.0074 (16) | 0.0099 (17) |
| C6 | 0.040 (2) | 0.048 (2) | 0.0461 (17) | −0.0002 (16) | 0.0109 (14) | 0.0044 (17) |
| C7 | 0.0283 (17) | 0.045 (2) | 0.0386 (17) | −0.0005 (15) | 0.0110 (13) | 0.0027 (15) |
| C8 | 0.042 (2) | 0.051 (2) | 0.0490 (18) | −0.0055 (17) | 0.0144 (14) | −0.0015 (16) |
| C9 | 0.047 (2) | 0.095 (3) | 0.060 (2) | −0.020 (2) | 0.0139 (18) | 0.007 (2) |
| C10 | 0.030 (2) | 0.122 (4) | 0.057 (2) | 0.003 (2) | 0.0147 (16) | 0.012 (2) |
| C11 | 0.046 (2) | 0.098 (3) | 0.057 (2) | 0.026 (2) | 0.0199 (19) | 0.003 (2) |
| C12 | 0.049 (2) | 0.057 (3) | 0.052 (2) | 0.0062 (18) | 0.0080 (17) | −0.0045 (15) |
| S1 | 0.0288 (4) | 0.0603 (6) | 0.0661 (5) | −0.0030 (5) | 0.0131 (3) | 0.0097 (5) |
| O1 | 0.0528 (15) | 0.0679 (18) | 0.0571 (13) | 0.0059 (12) | 0.0178 (10) | 0.0173 (13) |
| N1 | 0.0280 (14) | 0.0374 (16) | 0.0442 (14) | −0.0027 (11) | 0.0103 (11) | 0.0005 (12) |
| N2 | 0.0528 (19) | 0.085 (3) | 0.076 (2) | −0.0039 (18) | 0.0208 (15) | 0.030 (2) |
| N3 | 0.040 (2) | 0.092 (3) | 0.067 (2) | 0.0083 (17) | 0.0091 (15) | 0.0192 (18) |
| C1—O1 | 1.202 (3) | C7—C12 | 1.372 (4) |
| C1—N1 | 1.412 (4) | C7—C8 | 1.374 (4) |
| C1—C2 | 1.492 (4) | C7—N1 | 1.439 (3) |
| C2—S1 | 1.792 (3) | C8—C9 | 1.381 (4) |
| C2—H2A | 0.9700 | C8—H8 | 0.9300 |
| C2—H2B | 0.9700 | C9—C10 | 1.372 (6) |
| C3—N1 | 1.361 (4) | C9—H9 | 0.9300 |
| C3—C4 | 1.367 (4) | C10—C11 | 1.361 (5) |
| C3—S1 | 1.739 (3) | C10—H10 | 0.9300 |
| C4—C6 | 1.426 (4) | C11—C12 | 1.378 (5) |
| C4—C5 | 1.444 (5) | C11—H11 | 0.9300 |
| C5—N2 | 1.142 (4) | C12—H12 | 0.9300 |
| C6—N3 | 1.140 (4) | ||
| O1—C1—N1 | 122.6 (3) | C7—C8—C9 | 118.7 (3) |
| O1—C1—C2 | 126.5 (3) | C7—C8—H8 | 120.7 |
| N1—C1—C2 | 110.9 (3) | C9—C8—H8 | 120.7 |
| C1—C2—S1 | 108.3 (2) | C10—C9—C8 | 120.5 (4) |
| C1—C2—H2A | 110.0 | C10—C9—H9 | 119.8 |
| S1—C2—H2A | 110.0 | C8—C9—H9 | 119.8 |
| C1—C2—H2B | 110.0 | C11—C10—C9 | 120.1 (4) |
| S1—C2—H2B | 110.0 | C11—C10—H10 | 119.9 |
| H2A—C2—H2B | 108.4 | C9—C10—H10 | 119.9 |
| N1—C3—C4 | 126.1 (3) | C10—C11—C12 | 120.4 (4) |
| N1—C3—S1 | 112.7 (2) | C10—C11—H11 | 119.8 |
| C4—C3—S1 | 121.2 (2) | C12—C11—H11 | 119.8 |
| C3—C4—C6 | 127.1 (2) | C7—C12—C11 | 119.2 (4) |
| C3—C4—C5 | 117.8 (3) | C7—C12—H12 | 120.4 |
| C6—C4—C5 | 115.1 (3) | C11—C12—H12 | 120.4 |
| N2—C5—C4 | 179.5 (4) | C3—S1—C2 | 92.06 (15) |
| N3—C6—C4 | 174.6 (3) | C3—N1—C1 | 115.8 (2) |
| C12—C7—C8 | 121.1 (3) | C3—N1—C7 | 124.7 (2) |
| C12—C7—N1 | 119.5 (3) | C1—N1—C7 | 119.4 (2) |
| C8—C7—N1 | 119.3 (3) |
| H··· | ||||
| C10—H10···N2i | 0.93 | 2.62 | 3.504 (5) | 159 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C10—H10⋯N2i | 0.93 | 2.62 | 3.504 (5) | 159 |
Symmetry code: (i) .