Literature DB >> 23476538

3-(4-Meth-oxy-benzo-yl)-6-nitro-coumarin.

Saleta Vazquez-Rodriguez1, Eugenio Uriarte, Lourdes Santana.   

Abstract

In the title coumarin derivative (also known as 2H-chromen-2-one or 2H-1-benzopyran-2-one), C17H11NO6, the coumarin ring system is nearly planar, with a dihedral angle of 3.35 (9)° between the pyrone and the benzene rings. The dihedral angle between the planes formed by the coumarin ring system and the benzene substituent is 54.60 (7)°, clearly showing the non-coplanarity of the whole aromatic system. The crystal studied was a non-merohedral twin; the minor component refined to approximately 0.44.

Entities:  

Year:  2013        PMID: 23476538      PMCID: PMC3588552          DOI: 10.1107/S1600536813002948

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Raju et al. (2010 ▶). For examples of the biological activity of coumarin derivatives, see: Borges et al. (2009 ▶), Matos et al. (2011a ▶,b ▶,c ▶), Viña et al. (2012a ▶,b ▶); Vazquez-Rodriguez et al. (2013 ▶).

Experimental

Crystal data

C17H11NO6 M = 325.27 Monoclinic, a = 8.875 (3) Å b = 17.266 (5) Å c = 9.174 (3) Å β = 95.401 (15)° V = 1399.6 (7) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.67 × 0.14 × 0.03 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.604, T max = 0.745 30736 measured reflections 2864 independent reflections 2200 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.126 S = 0.91 2864 reflections 219 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813002948/go2080sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813002948/go2080Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813002948/go2080Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H11NO6F(000) = 672
Mr = 325.27Dx = 1.544 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.7107 Å
a = 8.875 (3) ÅCell parameters from 1848 reflections
b = 17.266 (5) Åθ = 2.4–26.2°
c = 9.174 (3) ŵ = 0.12 mm1
β = 95.401 (15)°T = 100 K
V = 1399.6 (7) Å3Prism, colourless
Z = 40.67 × 0.14 × 0.03 mm
Bruker APEXII CCD diffractometer2864 independent reflections
Radiation source: fine-focus sealed tube2200 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
ω and phi scansθmax = 26.5°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −11→11
Tmin = 0.604, Tmax = 0.745k = 0→21
30736 measured reflectionsl = 0→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.126H-atom parameters constrained
S = 0.91w = 1/[σ2(Fo2) + (0.0871P)2 + 0.3903P] where P = (Fo2 + 2Fc2)/3
2864 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.26 e Å3
Experimental. 1H NMR (250 MHz, DMSO-d6) δ p.p.m. 8.29 (d, J = 3.2 Hz, 1H, H-4), 7.75 (dd, J = 9.8, 3.1 Hz, 1H, H-7), 7.69–7.56 (m, 3H, H-5, o-H-2, o-H-6), 7.04 (d, J = 8.3 Hz, 2H, m-H-3, m-H5), 6.08 (d, J = 9.6 Hz, 1H, H-8), 3.83 (s, 3H, –OMe); 13C NMR (63 MHz, DMSO-d6) δ p.p.m. 192.91, 177.98, 166.65, 162.34, 138.75, 131.40, 130.83, 130.47, 129.32, 128.05, 127.28, 121.24, 120.67, 113.84, 55.61; MS EI m/z (%): 326 ([M+1]+, 25), 325 ([M]+, 93), 190 (34), 135 (100), 92 (27), 77 (37); Elem. Anal. Calcd. for C17H11NO6: C, C, 62.77; H, 3.41; Found: C, 62.72; H, 3.32.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.0307 (2)0.13803 (12)0.5978 (2)0.0137 (4)
C3−0.0864 (2)0.16362 (12)0.6744 (2)0.0153 (5)
H3−0.12560.21450.65950.018*
C4−0.1455 (2)0.11473 (12)0.7723 (2)0.0164 (5)
H4−0.22650.13100.82570.020*
C5−0.0842 (2)0.04053 (13)0.7918 (2)0.0156 (5)
C60.0352 (2)0.01480 (13)0.7193 (2)0.0147 (5)
H60.0751−0.03580.73640.018*
C70.0969 (2)0.06452 (12)0.6200 (2)0.0131 (4)
C80.2244 (2)0.04597 (12)0.5416 (2)0.0135 (4)
H80.2701−0.00360.55440.016*
C90.2809 (2)0.09697 (11)0.4506 (2)0.0131 (4)
C100.2034 (2)0.17126 (12)0.4186 (2)0.0149 (5)
C150.4152 (2)0.07478 (12)0.3707 (2)0.0146 (5)
C170.5336 (2)0.13255 (12)0.3473 (2)0.0147 (5)
C180.5631 (2)0.19667 (12)0.4378 (2)0.0144 (5)
H180.50550.20410.51890.017*
C190.6746 (2)0.24980 (13)0.4121 (2)0.0154 (5)
H190.69410.29280.47560.018*
C200.7579 (2)0.23946 (12)0.2922 (2)0.0154 (5)
C210.7319 (2)0.17463 (12)0.2022 (2)0.0171 (5)
H210.79010.16710.12160.021*
C220.6222 (2)0.12166 (12)0.2302 (2)0.0146 (5)
H220.60640.07730.16940.018*
C240.9071 (3)0.35368 (12)0.3471 (2)0.0205 (5)
H24A0.95280.33310.44060.031*
H24B0.81800.38470.36410.031*
H24C0.98090.38620.30270.031*
N11−0.1513 (2)−0.01184 (11)0.89252 (19)0.0186 (4)
O10.08130 (16)0.18773 (8)0.49739 (15)0.0152 (3)
O12−0.11434 (19)−0.08064 (9)0.89156 (18)0.0273 (4)
O13−0.24056 (19)0.01484 (9)0.97419 (17)0.0248 (4)
O140.23187 (18)0.21826 (9)0.32929 (17)0.0224 (4)
O160.42438 (17)0.00770 (9)0.32955 (17)0.0196 (4)
O230.86233 (17)0.29040 (8)0.24994 (16)0.0185 (4)
U11U22U33U12U13U23
C20.0131 (10)0.0141 (10)0.0138 (10)−0.0044 (9)0.0010 (8)0.0002 (8)
C30.0147 (11)0.0139 (11)0.0172 (11)0.0022 (9)0.0008 (9)−0.0025 (8)
C40.0141 (11)0.0192 (11)0.0163 (11)−0.0001 (9)0.0030 (9)−0.0046 (9)
C50.0140 (10)0.0202 (11)0.0127 (10)−0.0056 (9)0.0020 (8)−0.0014 (9)
C60.0145 (11)0.0150 (11)0.0143 (11)−0.0009 (9)0.0004 (9)−0.0011 (8)
C70.0102 (10)0.0157 (10)0.0132 (10)−0.0015 (9)0.0003 (8)−0.0033 (8)
C80.0139 (10)0.0110 (10)0.0154 (10)0.0009 (9)−0.0006 (8)−0.0031 (8)
C90.0120 (10)0.0137 (11)0.0140 (10)−0.0018 (9)0.0023 (8)−0.0032 (8)
C100.0112 (11)0.0165 (11)0.0172 (11)−0.0016 (9)0.0034 (9)−0.0018 (9)
C150.0134 (11)0.0176 (12)0.0130 (10)0.0009 (9)0.0017 (8)0.0011 (8)
C170.0132 (11)0.0170 (12)0.0143 (10)0.0037 (9)0.0038 (8)0.0031 (8)
C180.0120 (11)0.0180 (12)0.0136 (10)0.0028 (9)0.0037 (8)0.0011 (8)
C190.0155 (11)0.0161 (10)0.0145 (11)0.0022 (9)0.0014 (8)−0.0008 (9)
C200.0112 (10)0.0180 (12)0.0171 (11)0.0019 (9)0.0020 (8)0.0054 (9)
C210.0154 (11)0.0212 (12)0.0155 (11)0.0034 (9)0.0063 (8)0.0008 (9)
C220.0163 (11)0.0129 (11)0.0149 (10)0.0034 (9)0.0020 (8)−0.0015 (8)
C240.0198 (12)0.0183 (11)0.0232 (12)−0.0040 (10)0.0013 (9)0.0031 (9)
N110.0188 (10)0.0222 (11)0.0151 (10)−0.0038 (8)0.0033 (8)−0.0001 (8)
O10.0138 (8)0.0141 (7)0.0183 (8)0.0015 (6)0.0047 (6)0.0019 (6)
O120.0319 (10)0.0213 (9)0.0304 (10)−0.0009 (7)0.0119 (7)0.0048 (7)
O130.0268 (9)0.0303 (9)0.0195 (8)−0.0015 (8)0.0134 (7)−0.0017 (7)
O140.0203 (9)0.0209 (8)0.0271 (9)0.0003 (7)0.0076 (7)0.0086 (7)
O160.0204 (8)0.0160 (8)0.0234 (9)0.0007 (7)0.0070 (7)−0.0037 (6)
O230.0174 (8)0.0188 (8)0.0200 (8)−0.0043 (7)0.0060 (6)0.0018 (6)
C2—O11.365 (2)C15—C171.479 (3)
C2—C31.381 (3)C17—C181.394 (3)
C2—C71.405 (3)C17—C221.403 (3)
C3—C41.372 (3)C18—C191.386 (3)
C3—H30.9500C18—H180.9500
C4—C51.397 (3)C19—C201.393 (3)
C4—H40.9500C19—H190.9500
C5—C61.377 (3)C20—O231.361 (3)
C5—N111.459 (3)C20—C211.397 (3)
C6—C71.400 (3)C21—C221.377 (3)
C6—H60.9500C21—H210.9500
C7—C81.433 (3)C22—H220.9500
C8—C91.343 (3)C24—O231.442 (3)
C8—H80.9500C24—H24A0.9800
C9—C101.472 (3)C24—H24B0.9800
C9—C151.506 (3)C24—H24C0.9800
C10—O141.197 (3)N11—O131.230 (2)
C10—O11.387 (3)N11—O121.233 (2)
C15—O161.223 (3)
O1—C2—C3116.95 (18)C18—C17—C22118.4 (2)
O1—C2—C7120.40 (19)C18—C17—C15123.04 (19)
C3—C2—C7122.65 (19)C22—C17—C15118.55 (19)
C4—C3—C2119.25 (19)C19—C18—C17121.4 (2)
C4—C3—H3120.4C19—C18—H18119.3
C2—C3—H3120.4C17—C18—H18119.3
C3—C4—C5118.7 (2)C18—C19—C20119.3 (2)
C3—C4—H4120.7C18—C19—H19120.3
C5—C4—H4120.7C20—C19—H19120.3
C6—C5—C4122.8 (2)O23—C20—C19124.6 (2)
C6—C5—N11118.98 (19)O23—C20—C21115.35 (19)
C4—C5—N11118.18 (19)C19—C20—C21120.0 (2)
C5—C6—C7118.8 (2)C22—C21—C20120.1 (2)
C5—C6—H6120.6C22—C21—H21119.9
C7—C6—H6120.6C20—C21—H21119.9
C6—C7—C2117.68 (19)C21—C22—C17120.7 (2)
C6—C7—C8124.40 (19)C21—C22—H22119.6
C2—C7—C8117.91 (19)C17—C22—H22119.6
C9—C8—C7121.61 (19)O23—C24—H24A109.5
C9—C8—H8119.2O23—C24—H24B109.5
C7—C8—H8119.2H24A—C24—H24B109.5
C8—C9—C10120.03 (19)O23—C24—H24C109.5
C8—C9—C15119.64 (18)H24A—C24—H24C109.5
C10—C9—C15120.09 (18)H24B—C24—H24C109.5
O14—C10—O1116.33 (19)O13—N11—O12123.53 (18)
O14—C10—C9127.0 (2)O13—N11—C5118.57 (18)
O1—C10—C9116.64 (18)O12—N11—C5117.90 (18)
O16—C15—C17121.65 (19)C2—O1—C10123.03 (16)
O16—C15—C9118.01 (19)C20—O23—C24117.96 (17)
C17—C15—C9120.31 (18)
O1—C2—C3—C4177.38 (18)O16—C15—C17—C18−152.9 (2)
C7—C2—C3—C4−2.6 (3)C9—C15—C17—C1825.3 (3)
C2—C3—C4—C50.4 (3)O16—C15—C17—C2225.9 (3)
C3—C4—C5—C61.4 (3)C9—C15—C17—C22−155.83 (19)
C3—C4—C5—N11−177.98 (19)C22—C17—C18—C191.4 (3)
C4—C5—C6—C7−1.0 (3)C15—C17—C18—C19−179.72 (19)
N11—C5—C6—C7178.44 (18)C17—C18—C19—C200.8 (3)
C5—C6—C7—C2−1.2 (3)C18—C19—C20—O23175.13 (19)
C5—C6—C7—C8177.66 (19)C18—C19—C20—C21−2.1 (3)
O1—C2—C7—C6−176.97 (17)O23—C20—C21—C22−176.26 (18)
C3—C2—C7—C63.1 (3)C19—C20—C21—C221.2 (3)
O1—C2—C7—C84.1 (3)C20—C21—C22—C171.0 (3)
C3—C2—C7—C8−175.89 (19)C18—C17—C22—C21−2.3 (3)
C6—C7—C8—C9−178.2 (2)C15—C17—C22—C21178.75 (19)
C2—C7—C8—C90.6 (3)C6—C5—N11—O13168.4 (2)
C7—C8—C9—C10−5.7 (3)C4—C5—N11—O13−12.2 (3)
C7—C8—C9—C15179.94 (18)C6—C5—N11—O12−11.2 (3)
C8—C9—C10—O14−171.9 (2)C4—C5—N11—O12168.27 (19)
C15—C9—C10—O142.5 (3)C3—C2—O1—C10176.38 (18)
C8—C9—C10—O16.1 (3)C7—C2—O1—C10−3.6 (3)
C15—C9—C10—O1−179.58 (17)O14—C10—O1—C2176.75 (18)
C8—C9—C15—O1635.9 (3)C9—C10—O1—C2−1.4 (3)
C10—C9—C15—O16−138.5 (2)C19—C20—O23—C249.7 (3)
C8—C9—C15—C17−142.4 (2)C21—C20—O23—C24−172.89 (18)
C10—C9—C15—C1743.2 (3)
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