| Literature DB >> 23476529 |
T Mohandas1, K Jayamoorthy, P Sakthivel, J Jayabharathi.
Abstract
In the title compound, C20H16N2, the benzimidazole ring system forms dihedral angles of 28.50 (7) and 72.44 (7)° with the tolyl and phenyl rings, respectively. In the crystal, mol-ecules are linked into chains along the a-axis direction by weak C-H⋯N inter-actions. The crystal structure also features C-H⋯π inter-actions.Entities:
Year: 2013 PMID: 23476529 PMCID: PMC3588497 DOI: 10.1107/S160053681300264X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H16N2 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3879 reflections |
| θ = 2.7–22.5° | |
| µ = 0.07 mm−1 | |
| Block, colourless | |
| 0.30 × 0.30 × 0.25 mm |
| Bruker Kappa APEXII diffractometer | 2523 independent reflections |
| Radiation source: rotating anode | 1840 reflections with |
| Graphite monochromator | |
| Detector resolution: 18.4 pixels mm-1 | θmax = 24.3°, θmin = 2.3° |
| ω and φ scan | |
| Absorption correction: multi-scan ( | |
| 15284 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2523 reflections | Δρmax = 0.12 e Å−3 |
| 201 parameters | Δρmin = −0.11 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0073 (6) |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| N1 | 0.14753 (9) | −0.13901 (15) | 0.07038 (6) | 0.0552 (5) | |
| N2 | 0.09742 (9) | 0.08161 (13) | 0.08884 (6) | 0.0487 (5) | |
| C1 | 0.12646 (10) | −0.12606 (18) | 0.13367 (8) | 0.0531 (6) | |
| C2 | 0.13195 (12) | −0.2254 (2) | 0.18248 (9) | 0.0672 (7) | |
| C3 | 0.10524 (14) | −0.1835 (2) | 0.24119 (9) | 0.0743 (8) | |
| C4 | 0.07406 (13) | −0.0470 (2) | 0.25226 (9) | 0.0751 (8) | |
| C5 | 0.06882 (11) | 0.0531 (2) | 0.20511 (8) | 0.0641 (7) | |
| C6 | 0.09523 (10) | 0.01008 (17) | 0.14593 (7) | 0.0507 (6) | |
| C7 | 0.12994 (9) | −0.01370 (17) | 0.04511 (7) | 0.0472 (6) | |
| C8 | 0.14252 (10) | 0.01833 (17) | −0.02203 (7) | 0.0470 (5) | |
| C9 | 0.09213 (11) | 0.11433 (17) | −0.05513 (8) | 0.0536 (6) | |
| C10 | 0.10375 (12) | 0.13481 (18) | −0.11886 (8) | 0.0569 (6) | |
| C11 | 0.16546 (11) | 0.06158 (19) | −0.15234 (8) | 0.0562 (6) | |
| C12 | 0.21529 (11) | −0.0342 (2) | −0.11910 (8) | 0.0647 (7) | |
| C13 | 0.20433 (11) | −0.05620 (19) | −0.05528 (8) | 0.0597 (7) | |
| C14 | 0.17583 (14) | 0.0840 (2) | −0.22227 (9) | 0.0782 (8) | |
| C15 | 0.07647 (10) | 0.22994 (17) | 0.08275 (7) | 0.0473 (6) | |
| C16 | 0.14063 (13) | 0.32822 (19) | 0.07561 (8) | 0.0615 (7) | |
| C17 | 0.12051 (17) | 0.4708 (2) | 0.07146 (9) | 0.0791 (9) | |
| C18 | 0.03838 (19) | 0.5144 (2) | 0.07484 (9) | 0.0793 (9) | |
| C19 | −0.02647 (15) | 0.4162 (2) | 0.08192 (8) | 0.0741 (8) | |
| C20 | −0.00744 (12) | 0.2715 (2) | 0.08613 (7) | 0.0586 (7) | |
| H2 | 0.15302 | −0.31698 | 0.17546 | 0.0806* | |
| H3 | 0.10809 | −0.24820 | 0.27444 | 0.0892* | |
| H4 | 0.05623 | −0.02266 | 0.29271 | 0.0901* | |
| H5 | 0.04856 | 0.14504 | 0.21259 | 0.0769* | |
| H9 | 0.04999 | 0.16546 | −0.03403 | 0.0642* | |
| H10 | 0.06909 | 0.19980 | −0.13997 | 0.0683* | |
| H12 | 0.25734 | −0.08529 | −0.14034 | 0.0777* | |
| H13 | 0.23879 | −0.12174 | −0.03432 | 0.0717* | |
| H14A | 0.12372 | 0.05913 | −0.24338 | 0.1173* | |
| H14B | 0.22126 | 0.02453 | −0.23762 | 0.1173* | |
| H14C | 0.18915 | 0.18246 | −0.23039 | 0.1173* | |
| H16 | 0.19721 | 0.29863 | 0.07359 | 0.0738* | |
| H17 | 0.16371 | 0.53792 | 0.06628 | 0.0949* | |
| H18 | 0.02558 | 0.61134 | 0.07237 | 0.0949* | |
| H19 | −0.08286 | 0.44676 | 0.08386 | 0.0889* | |
| H20 | −0.05058 | 0.20415 | 0.09114 | 0.0703* |
| N1 | 0.0569 (9) | 0.0543 (9) | 0.0543 (9) | 0.0053 (7) | −0.0008 (7) | 0.0016 (7) |
| N2 | 0.0514 (8) | 0.0480 (8) | 0.0466 (8) | −0.0015 (6) | 0.0053 (6) | −0.0017 (6) |
| C1 | 0.0496 (10) | 0.0571 (11) | 0.0526 (11) | −0.0049 (8) | −0.0022 (8) | 0.0039 (8) |
| C2 | 0.0721 (13) | 0.0649 (12) | 0.0646 (12) | −0.0018 (10) | −0.0062 (10) | 0.0113 (10) |
| C3 | 0.0794 (14) | 0.0847 (15) | 0.0589 (13) | −0.0093 (12) | −0.0015 (10) | 0.0201 (11) |
| C4 | 0.0791 (14) | 0.0967 (16) | 0.0495 (11) | −0.0075 (12) | 0.0088 (9) | 0.0050 (11) |
| C5 | 0.0679 (13) | 0.0721 (12) | 0.0522 (11) | −0.0022 (10) | 0.0083 (9) | −0.0026 (9) |
| C6 | 0.0488 (10) | 0.0558 (10) | 0.0475 (10) | −0.0053 (8) | 0.0034 (8) | 0.0010 (8) |
| C7 | 0.0415 (9) | 0.0499 (10) | 0.0501 (10) | −0.0007 (7) | 0.0011 (7) | −0.0023 (8) |
| C8 | 0.0443 (9) | 0.0509 (9) | 0.0459 (9) | −0.0013 (7) | 0.0003 (7) | −0.0038 (8) |
| C9 | 0.0544 (11) | 0.0542 (10) | 0.0521 (10) | 0.0055 (8) | 0.0036 (8) | −0.0039 (8) |
| C10 | 0.0615 (11) | 0.0570 (10) | 0.0522 (11) | 0.0019 (9) | −0.0021 (8) | 0.0026 (8) |
| C11 | 0.0537 (11) | 0.0655 (11) | 0.0494 (10) | −0.0088 (9) | 0.0029 (8) | −0.0034 (9) |
| C12 | 0.0527 (11) | 0.0859 (13) | 0.0556 (12) | 0.0088 (10) | 0.0074 (8) | −0.0126 (10) |
| C13 | 0.0517 (11) | 0.0727 (12) | 0.0548 (11) | 0.0128 (9) | −0.0003 (8) | −0.0027 (9) |
| C14 | 0.0827 (15) | 0.0974 (15) | 0.0545 (12) | −0.0074 (12) | 0.0090 (10) | 0.0015 (10) |
| C15 | 0.0540 (11) | 0.0474 (10) | 0.0404 (9) | −0.0020 (8) | 0.0028 (7) | −0.0048 (7) |
| C16 | 0.0659 (12) | 0.0582 (12) | 0.0603 (11) | −0.0100 (9) | 0.0070 (9) | −0.0054 (9) |
| C17 | 0.112 (2) | 0.0552 (12) | 0.0700 (13) | −0.0163 (12) | 0.0153 (12) | −0.0064 (10) |
| C18 | 0.131 (2) | 0.0530 (12) | 0.0538 (12) | 0.0133 (14) | 0.0079 (12) | −0.0039 (9) |
| C19 | 0.0857 (15) | 0.0854 (15) | 0.0511 (12) | 0.0331 (13) | 0.0013 (10) | −0.0125 (10) |
| C20 | 0.0570 (12) | 0.0664 (12) | 0.0525 (10) | 0.0050 (9) | 0.0034 (8) | −0.0104 (9) |
| N1—C1 | 1.387 (2) | C16—C17 | 1.373 (3) |
| N1—C7 | 1.318 (2) | C17—C18 | 1.352 (4) |
| N2—C6 | 1.383 (2) | C18—C19 | 1.378 (3) |
| N2—C7 | 1.383 (2) | C19—C20 | 1.388 (3) |
| N2—C15 | 1.431 (2) | C2—H2 | 0.9300 |
| C1—C2 | 1.393 (3) | C3—H3 | 0.9300 |
| C1—C6 | 1.389 (2) | C4—H4 | 0.9300 |
| C2—C3 | 1.370 (3) | C5—H5 | 0.9300 |
| C3—C4 | 1.387 (3) | C9—H9 | 0.9300 |
| C4—C5 | 1.372 (3) | C10—H10 | 0.9300 |
| C5—C6 | 1.381 (2) | C12—H12 | 0.9300 |
| C7—C8 | 1.468 (2) | C13—H13 | 0.9300 |
| C8—C9 | 1.386 (2) | C14—H14A | 0.9600 |
| C8—C13 | 1.386 (2) | C14—H14B | 0.9600 |
| C9—C10 | 1.377 (2) | C14—H14C | 0.9600 |
| C10—C11 | 1.381 (2) | C16—H16 | 0.9300 |
| C11—C12 | 1.382 (2) | C17—H17 | 0.9300 |
| C11—C14 | 1.506 (3) | C18—H18 | 0.9300 |
| C12—C13 | 1.379 (2) | C19—H19 | 0.9300 |
| C15—C16 | 1.371 (2) | C20—H20 | 0.9300 |
| C15—C20 | 1.373 (2) | ||
| C1—N1—C7 | 105.41 (13) | C15—C20—C19 | 118.57 (18) |
| C6—N2—C7 | 106.49 (12) | C1—C2—H2 | 121.00 |
| C6—N2—C15 | 122.81 (13) | C3—C2—H2 | 121.00 |
| C7—N2—C15 | 130.43 (13) | C2—C3—H3 | 119.00 |
| N1—C1—C2 | 130.20 (16) | C4—C3—H3 | 119.00 |
| N1—C1—C6 | 110.19 (14) | C3—C4—H4 | 119.00 |
| C2—C1—C6 | 119.61 (16) | C5—C4—H4 | 119.00 |
| C1—C2—C3 | 117.71 (17) | C4—C5—H5 | 122.00 |
| C2—C3—C4 | 121.64 (18) | C6—C5—H5 | 122.00 |
| C3—C4—C5 | 121.73 (18) | C8—C9—H9 | 120.00 |
| C4—C5—C6 | 116.43 (17) | C10—C9—H9 | 120.00 |
| N2—C6—C1 | 105.72 (13) | C9—C10—H10 | 119.00 |
| N2—C6—C5 | 131.41 (15) | C11—C10—H10 | 119.00 |
| C1—C6—C5 | 122.88 (15) | C11—C12—H12 | 119.00 |
| N1—C7—N2 | 112.19 (13) | C13—C12—H12 | 119.00 |
| N1—C7—C8 | 123.20 (14) | C8—C13—H13 | 120.00 |
| N2—C7—C8 | 124.60 (14) | C12—C13—H13 | 120.00 |
| C7—C8—C9 | 123.12 (14) | C11—C14—H14A | 109.00 |
| C7—C8—C13 | 118.97 (14) | C11—C14—H14B | 109.00 |
| C9—C8—C13 | 117.81 (15) | C11—C14—H14C | 109.00 |
| C8—C9—C10 | 120.76 (16) | H14A—C14—H14B | 109.00 |
| C9—C10—C11 | 121.86 (16) | H14A—C14—H14C | 110.00 |
| C10—C11—C12 | 117.08 (16) | H14B—C14—H14C | 109.00 |
| C10—C11—C14 | 120.82 (16) | C15—C16—H16 | 120.00 |
| C12—C11—C14 | 122.09 (16) | C17—C16—H16 | 120.00 |
| C11—C12—C13 | 121.77 (16) | C16—C17—H17 | 120.00 |
| C8—C13—C12 | 120.72 (16) | C18—C17—H17 | 120.00 |
| N2—C15—C16 | 119.43 (15) | C17—C18—H18 | 120.00 |
| N2—C15—C20 | 119.29 (15) | C19—C18—H18 | 120.00 |
| C16—C15—C20 | 121.25 (16) | C18—C19—H19 | 120.00 |
| C15—C16—C17 | 119.32 (19) | C20—C19—H19 | 120.00 |
| C16—C17—C18 | 120.5 (2) | C15—C20—H20 | 121.00 |
| C17—C18—C19 | 120.47 (19) | C19—C20—H20 | 121.00 |
| C18—C19—C20 | 119.9 (2) | ||
| C7—N1—C1—C2 | 179.96 (18) | C4—C5—C6—C1 | −0.6 (3) |
| C7—N1—C1—C6 | 0.33 (18) | C4—C5—C6—N2 | 179.05 (17) |
| C1—N1—C7—N2 | −0.49 (17) | N2—C7—C8—C13 | 154.00 (15) |
| C1—N1—C7—C8 | −179.56 (14) | N1—C7—C8—C9 | 149.15 (16) |
| C6—N2—C7—N1 | 0.47 (18) | N1—C7—C8—C13 | −27.1 (2) |
| C15—N2—C7—N1 | 174.56 (15) | N2—C7—C8—C9 | −29.8 (2) |
| C6—N2—C15—C16 | 103.65 (18) | C13—C8—C9—C10 | −0.3 (2) |
| C7—N2—C15—C16 | −69.6 (2) | C7—C8—C13—C12 | 176.83 (16) |
| C6—N2—C15—C20 | −74.4 (2) | C7—C8—C9—C10 | −176.52 (16) |
| C7—N2—C15—C20 | 112.39 (18) | C9—C8—C13—C12 | 0.4 (3) |
| C7—N2—C6—C1 | −0.23 (17) | C8—C9—C10—C11 | 0.0 (3) |
| C15—N2—C6—C1 | −174.88 (14) | C9—C10—C11—C12 | 0.2 (3) |
| C7—N2—C6—C5 | −179.95 (17) | C9—C10—C11—C14 | 178.90 (17) |
| C15—N2—C6—C5 | 5.4 (3) | C14—C11—C12—C13 | −178.73 (17) |
| C6—N2—C7—C8 | 179.52 (14) | C10—C11—C12—C13 | −0.1 (3) |
| C15—N2—C7—C8 | −6.4 (3) | C11—C12—C13—C8 | −0.3 (3) |
| C6—C1—C2—C3 | 0.4 (3) | N2—C15—C16—C17 | −178.28 (15) |
| N1—C1—C6—C5 | 179.69 (15) | C20—C15—C16—C17 | −0.3 (2) |
| N1—C1—C6—N2 | −0.06 (19) | N2—C15—C20—C19 | 178.20 (14) |
| N1—C1—C2—C3 | −179.16 (18) | C16—C15—C20—C19 | 0.2 (2) |
| C2—C1—C6—C5 | 0.0 (3) | C15—C16—C17—C18 | 0.5 (3) |
| C2—C1—C6—N2 | −179.73 (15) | C16—C17—C18—C19 | −0.6 (3) |
| C1—C2—C3—C4 | −0.3 (3) | C17—C18—C19—C20 | 0.5 (3) |
| C2—C3—C4—C5 | −0.4 (3) | C18—C19—C20—C15 | −0.3 (2) |
| C3—C4—C5—C6 | 0.8 (3) |
| H··· | ||||
| C16—H16···N1i | 0.9300 | 2.5000 | 3.337 (2) | 149.00 |
| C20—H20··· | 0.9300 | 2.7988 | 3.707 (2) | 165.79 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C15–C20 phenyl ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C16—H16⋯N1i | 0.93 | 2.50 | 3.337 (2) | 149 |
| C20—H20⋯ | 0.93 | 2.80 | 3.707 (2) | 166 |
Symmetry codes: (i) ; (ii) .