Literature DB >> 23476519

3-Methyl-ideneoxolane-2,5-dione.

Uwe Beginn1, Martin Frosinn, Martin Reichelt, Hans Reuter.   

Abstract

The title compound (itaconic anhydride), C5H4O3, consists of a five-membered carbon-oxygen ring in a flat envelope conformation (the unsubstituted C atom being the flap) with three exocyclic double bonds to two O atoms and one C atom. In contrast to the bond lengths, which are very similar to those in itaconic acid in its pure form or in adducts with other mol-ecules, the bond angles differ significantly because of the effect of ring closure giving rise to strong distortions at the C atoms involved in the exocyclic double bonds. In the crystal, C-H⋯O inter-actions link the mol-ecules, forming an extended three-dimensional network.

Entities:  

Year:  2013        PMID: 23476519      PMCID: PMC3588448          DOI: 10.1107/S1600536813002924

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the pure acid, see: Harlow & Pfluger (1973 ▶) and for the structure of the acid in combination with 2,2′-dipyridyl-N,N′-dioxide or urea, see: Smith et al. (1997 ▶); Baures et al. (2000 ▶). For the structure of succinic anhydride, see: Ferretti et al. (2002) ▶. For the preparation of the anhydride, see: Choudhary (2004 ▶); Kempf (1909 ▶) and for its polymerization, see: Otsu & Yang (1991 ▶).

Experimental

Crystal data

C5H4O3 M = 112.08 Orthorhombic, a = 5.4854 (3) Å b = 7.3498 (5) Å c = 12.1871 (7) Å V = 491.34 (5) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 100 K 0.27 × 0.09 × 0.07 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.966, T max = 0.991 18134 measured reflections 716 independent reflections 639 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.065 S = 1.10 716 reflections 74 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813002924/gg2110sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813002924/gg2110Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813002924/gg2110Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C5H4O3Dx = 1.515 Mg m3
Mr = 112.08Melting point: 340.05 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6479 reflections
a = 5.4854 (3) Åθ = 3.2–27.0°
b = 7.3498 (5) ŵ = 0.13 mm1
c = 12.1871 (7) ÅT = 100 K
V = 491.34 (5) Å3Needle, colourless
Z = 40.27 × 0.09 × 0.07 mm
F(000) = 232
Bruker APEXII CCD diffractometer716 independent reflections
Radiation source: fine-focus sealed tube639 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.037
φ and ω scansθmax = 28.0°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −7→7
Tmin = 0.966, Tmax = 0.991k = −9→9
18134 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H-atom parameters constrained
wR(F2) = 0.065w = 1/[σ2(Fo2) + (0.0343P)2 + 0.0728P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
716 reflectionsΔρmax = 0.24 e Å3
74 parametersΔρmin = −0.14 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.037 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.00411 (19)0.79021 (13)0.61376 (8)0.0188 (3)
C20.8967 (3)0.9113 (2)0.54015 (12)0.0163 (3)
O20.99390 (19)0.94361 (14)0.45473 (8)0.0224 (3)
C30.6656 (3)0.9775 (2)0.58826 (12)0.0154 (3)
C40.6393 (3)0.8894 (2)0.69856 (12)0.0173 (3)
H4A0.48730.81710.70280.021*
H4B0.63900.98140.75790.021*
C50.8600 (3)0.7691 (2)0.70585 (12)0.0194 (3)
O50.9200 (2)0.66606 (17)0.77659 (9)0.0299 (3)
C60.5202 (3)1.0912 (2)0.53599 (12)0.0203 (3)
H6A0.56261.13350.46480.024*
H6B0.37311.13090.56950.024*
U11U22U33U12U13U23
O10.0164 (5)0.0215 (5)0.0185 (5)0.0036 (5)0.0003 (5)−0.0016 (4)
C20.0165 (7)0.0155 (7)0.0168 (7)−0.0018 (6)−0.0029 (6)−0.0029 (6)
O20.0215 (6)0.0279 (6)0.0176 (5)−0.0033 (5)0.0038 (6)−0.0018 (4)
C30.0143 (7)0.0157 (7)0.0163 (6)−0.0021 (6)−0.0004 (6)−0.0040 (6)
C40.0172 (7)0.0176 (7)0.0171 (6)0.0001 (6)0.0005 (6)−0.0006 (6)
C50.0206 (8)0.0212 (8)0.0166 (7)0.0006 (7)−0.0012 (7)−0.0036 (6)
O50.0335 (7)0.0330 (7)0.0231 (6)0.0123 (6)−0.0013 (5)0.0077 (5)
C60.0177 (7)0.0187 (7)0.0245 (7)−0.0005 (7)−0.0009 (7)0.0011 (6)
O1—C51.382 (2)C4—C51.502 (2)
O1—C21.394 (2)C4—H4A0.9900
C2—O21.193 (2)C4—H4B0.9900
C2—C31.479 (2)C5—O51.194 (2)
C3—C61.319 (2)C6—H6A0.9500
C3—C41.499 (2)C6—H6B0.9500
C2—O1—C5110.65 (11)O1—C5—C4110.31 (12)
O1—C2—O2119.98 (13)C3—C4—H4A111.1
O2—C2—C3131.52 (14)C5—C4—H4A111.1
O1—C2—C3108.49 (12)C3—C4—H4B111.1
C2—C3—C6122.35 (13)C5—C4—H4B111.1
C4—C3—C6130.45 (14)H4A—C4—H4B109.1
C2—C3—C4107.19 (13)C3—C6—H6A120.0
C3—C4—C5103.29 (13)C3—C6—H6B120.0
O1—C5—O5120.01 (14)H6A—C6—H6B120.0
O5—C5—C4129.68 (15)
O1—C2—C3—C40.65 (15)C4—C5—O1—C2−2.28 (16)
C2—C3—C4—C5−1.86 (15)C5—O1—C2—C31.00 (15)
C3—C4—C5—O12.54 (16)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O5i0.952.733.645 (2)162
C6—H6B···O5ii0.952.483.369 (2)155
C4—H4B···O2iii0.992.573.433 (2)146
C4—H4A···O2iv0.992.713.181 (2)109
Table 1

Selected bond angles (°)

C2—O1—C5110.65 (11)
O1—C2—O2119.98 (13)
O2—C2—C3131.52 (14)
O1—C2—C3108.49 (12)
C2—C3—C6122.35 (13)
C4—C3—C6130.45 (14)
C2—C3—C4107.19 (13)
C3—C4—C5103.29 (13)
O1—C5—O5120.01 (14)
O5—C5—C4129.68 (15)
O1—C5—C4110.31 (12)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C6—H6A⋯O5i 0.952.733.645 (2)162
C6—H6B⋯O5ii 0.952.483.369 (2)155
C4—H4B⋯O2iii 0.992.573.433 (2)146
C4—H4A⋯O2iv 0.992.713.181 (2)109

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  X-ray diffraction and molecular simulation study of the crystalline and liquid states of succinic anhydride.

Authors:  Valeria Ferretti; Paola Gilli; Angelo Gavezzotti
Journal:  Chemistry       Date:  2002-04-02       Impact factor: 5.236

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Hydrogen bonding isosteres: bimolecular carboxylic acid and amine-N-oxide interactions mediated via CH...O hydrogen bonds.

Authors:  P W Baures; A Wiznycia; A M Beatty
Journal:  Bioorg Med Chem       Date:  2000-07       Impact factor: 3.641

  3 in total

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