Literature DB >> 23476445

2-Hy-droxy-4-(prop-2-yn-yloxy)benz-alde-hyde.

V Selvarani1, M A Neelakantan, V Silambarasan, D Velmurugan.   

Abstract

The asymmetric unit of the title compound, C10H8O3, contains two independent mol-ecules, both of which are almost planar (r.m.s deviations for all non-H atoms of 0.044 and 0.053 Å). The dihedral angles between the benzene ring and the prop-1-yne group are 3.47 (1) and 3.07 (1)° in the two mol-ecules, and the prop-1-yne groups adopt extended conformations. In each mol-ecule, an intra-molecular O-H⋯O hydrogen bond involving the OH and aldehyde substituents forms an S(6) ring. In the crystal, mol-ecules are linked into cyclic centrosymmetric dimers via C-H⋯O hydrogen bonds, generating R2(2)(14) ring motifs. The crystal structure is further stabilized by aromatic π-π stacking inter-actions between the benzene rings [centroid-centroid distances = 3.813 (2) and 3.843 (2) Å].

Entities:  

Year:  2012        PMID: 23476445      PMCID: PMC3588223          DOI: 10.1107/S1600536812049598

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzaldehyde derivatives, see: Zhao et al. (2007 ▶); Ley & Bertram (2001 ▶); Delogu et al. (2010 ▶). For a related structure see: Esakkiammal et al. (2012 ▶). For standard bond lengths, see: Allen et al. (1987 ▶) and for hydrogen-bond motifs, see: Bernstein et al. (1995) ▶.

Experimental

Crystal data

C10H8O3 M = 176.16 Triclinic, a = 7.0835 (5) Å b = 10.4059 (7) Å c = 12.8461 (8) Å α = 73.910 (3)° β = 89.756 (4)° γ = 73.436 (4)° V = 869.16 (10) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEXII area-detector diffractometer 15699 measured reflections 4347 independent reflections 2880 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.132 S = 1.05 4347 reflections 243 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012) ▶; software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812049598/sj5285sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812049598/sj5285Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812049598/sj5285Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H8O3Z = 4
Mr = 176.16F(000) = 368
Triclinic, P1Dx = 1.346 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.0835 (5) ÅCell parameters from 4347 reflections
b = 10.4059 (7) Åθ = 1.7–28.4°
c = 12.8461 (8) ŵ = 0.10 mm1
α = 73.910 (3)°T = 293 K
β = 89.756 (4)°Block, colourless
γ = 73.436 (4)°0.20 × 0.20 × 0.20 mm
V = 869.16 (10) Å3
Bruker SMART APEXII area-detector diffractometer2880 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
Graphite monochromatorθmax = 28.4°, θmin = 1.7°
ω and φ scansh = −9→9
15699 measured reflectionsk = −13→13
4347 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.132H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0595P)2 + 0.0997P] where P = (Fo2 + 2Fc2)/3
4347 reflections(Δ/σ)max < 0.001
243 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O40.23016 (15)0.81458 (9)0.55793 (7)0.0528 (3)
C140.2775 (2)0.69318 (13)0.41998 (10)0.0473 (3)
H140.31730.60580.47130.057*
O50.31664 (18)0.58412 (11)0.28152 (9)0.0699 (3)
H50.30650.60280.21510.105*
C160.1668 (2)0.94571 (13)0.37621 (11)0.0498 (3)
H160.13261.02640.39870.060*
C150.22699 (19)0.81361 (13)0.45238 (10)0.0423 (3)
C120.2087 (2)0.83519 (14)0.23261 (10)0.0473 (3)
O60.2396 (2)0.74928 (15)0.07950 (9)0.0831 (4)
C130.2683 (2)0.70387 (14)0.31045 (11)0.0467 (3)
C110.1590 (2)0.95453 (14)0.26846 (11)0.0511 (3)
H110.11961.04230.21750.061*
C180.2822 (3)0.68218 (15)0.63841 (11)0.0639 (4)
H18A0.41610.62900.63140.077*
H18B0.19400.62960.62840.077*
C190.2680 (2)0.70303 (15)0.74570 (12)0.0546 (4)
C170.1995 (2)0.84683 (19)0.11911 (12)0.0643 (4)
H170.15940.93670.07120.077*
C200.2593 (3)0.71369 (18)0.83353 (13)0.0652 (4)
O10.27472 (15)0.21006 (10)0.97384 (7)0.0556 (3)
C40.2102 (2)0.31928 (13)0.77968 (10)0.0480 (3)
H40.16430.40860.78810.058*
C60.3435 (2)0.06902 (13)0.85818 (11)0.0475 (3)
H60.3856−0.00810.91920.057*
C50.27430 (19)0.20366 (13)0.86926 (10)0.0426 (3)
C30.2154 (2)0.30031 (13)0.67725 (10)0.0458 (3)
C20.28516 (19)0.16624 (13)0.66383 (10)0.0442 (3)
C10.3487 (2)0.05198 (14)0.75674 (11)0.0480 (3)
H10.3956−0.03770.74910.058*
O20.15146 (18)0.41492 (10)0.59107 (7)0.0675 (3)
H20.16090.39140.53490.101*
O30.2389 (2)0.23901 (13)0.47217 (8)0.0756 (4)
C70.2915 (2)0.14587 (18)0.55809 (12)0.0594 (4)
H70.33960.05440.55420.071*
C90.2226 (2)0.32905 (16)1.10635 (12)0.0576 (4)
C80.2136 (3)0.34536 (16)0.99018 (12)0.0664 (4)
H8A0.07970.39460.95820.080*
H8B0.29960.39950.95560.080*
C100.2270 (3)0.3192 (2)1.19909 (14)0.0684 (5)
H100.230 (3)0.3082 (19)1.2682 (16)0.088 (6)*
H200.253 (2)0.7250 (17)0.9014 (15)0.078 (5)*
U11U22U33U12U13U23
O40.0719 (7)0.0437 (5)0.0408 (5)−0.0109 (4)0.0031 (4)−0.0153 (4)
C140.0586 (8)0.0379 (6)0.0406 (7)−0.0080 (6)0.0023 (6)−0.0100 (5)
O50.0999 (9)0.0533 (6)0.0531 (6)−0.0056 (6)0.0018 (6)−0.0275 (5)
C160.0560 (8)0.0390 (7)0.0518 (8)−0.0098 (6)0.0033 (6)−0.0134 (6)
C150.0445 (7)0.0427 (7)0.0397 (6)−0.0110 (5)0.0038 (5)−0.0137 (5)
C120.0456 (7)0.0545 (8)0.0400 (7)−0.0149 (6)0.0048 (6)−0.0106 (6)
O60.1047 (10)0.1030 (10)0.0461 (6)−0.0269 (8)0.0113 (6)−0.0326 (7)
C130.0496 (8)0.0453 (7)0.0448 (7)−0.0095 (6)0.0041 (6)−0.0170 (6)
C110.0547 (8)0.0428 (7)0.0473 (7)−0.0116 (6)0.0008 (6)−0.0025 (6)
C180.0978 (12)0.0474 (8)0.0417 (7)−0.0147 (8)−0.0004 (7)−0.0118 (6)
C190.0653 (9)0.0533 (8)0.0459 (8)−0.0192 (7)0.0014 (7)−0.0134 (6)
C170.0681 (10)0.0793 (11)0.0416 (8)−0.0221 (8)0.0062 (7)−0.0110 (8)
C200.0841 (12)0.0716 (10)0.0446 (8)−0.0277 (9)0.0068 (8)−0.0195 (8)
O10.0775 (7)0.0464 (5)0.0335 (5)−0.0063 (5)−0.0011 (4)−0.0091 (4)
C40.0655 (9)0.0367 (6)0.0382 (7)−0.0110 (6)−0.0009 (6)−0.0093 (5)
C60.0544 (8)0.0390 (6)0.0422 (7)−0.0094 (6)0.0008 (6)−0.0051 (5)
C50.0475 (7)0.0426 (7)0.0342 (6)−0.0106 (5)0.0010 (5)−0.0083 (5)
C30.0587 (8)0.0418 (7)0.0359 (6)−0.0192 (6)−0.0013 (6)−0.0051 (5)
C20.0495 (7)0.0477 (7)0.0412 (7)−0.0213 (6)0.0059 (6)−0.0150 (5)
C10.0528 (8)0.0392 (7)0.0524 (8)−0.0121 (6)0.0050 (6)−0.0154 (6)
O20.1155 (10)0.0468 (6)0.0338 (5)−0.0239 (6)−0.0080 (5)−0.0015 (4)
O30.1107 (10)0.0851 (8)0.0383 (6)−0.0384 (7)0.0061 (6)−0.0197 (6)
C70.0737 (10)0.0662 (9)0.0500 (8)−0.0290 (8)0.0105 (7)−0.0264 (7)
C90.0645 (10)0.0590 (9)0.0495 (8)−0.0133 (7)0.0022 (7)−0.0212 (7)
C80.0962 (12)0.0514 (8)0.0438 (8)−0.0067 (8)0.0006 (8)−0.0167 (6)
C100.0784 (12)0.0844 (12)0.0474 (9)−0.0227 (9)0.0045 (8)−0.0286 (8)
O4—C151.3591 (14)O1—C51.3634 (14)
O4—C181.4237 (16)O1—C81.4245 (16)
C14—C151.3798 (17)C4—C51.3797 (17)
C14—C131.3806 (18)C4—C31.3825 (18)
C14—H140.9300C4—H40.9300
O5—C131.3493 (15)C6—C11.3619 (18)
O5—H50.8200C6—C51.3935 (17)
C16—C111.3619 (18)C6—H60.9300
C16—C151.3974 (17)C3—O21.3481 (15)
C16—H160.9300C3—C21.3999 (18)
C12—C111.3944 (19)C2—C11.3977 (18)
C12—C131.4010 (19)C2—C71.4304 (18)
C12—C171.4295 (19)C1—H10.9300
O6—C171.221 (2)O2—H20.8200
C11—H110.9300O3—C71.2251 (19)
C18—C191.4522 (19)C7—H70.9300
C18—H18A0.9700C9—C101.167 (2)
C18—H18B0.9700C9—C81.454 (2)
C19—C201.164 (2)C8—H8A0.9700
C17—H170.9300C8—H8B0.9700
C20—H200.911 (18)C10—H100.862 (19)
C15—O4—C18116.91 (10)C5—O1—C8117.38 (10)
C15—C14—C13119.27 (12)C5—C4—C3119.00 (12)
C15—C14—H14120.4C5—C4—H4120.5
C13—C14—H14120.4C3—C4—H4120.5
C13—O5—H5109.5C1—C6—C5119.09 (11)
C11—C16—C15118.97 (12)C1—C6—H6120.5
C11—C16—H16120.5C5—C6—H6120.5
C15—C16—H16120.5O1—C5—C4123.96 (11)
O4—C15—C14123.91 (11)O1—C5—C6114.78 (10)
O4—C15—C16115.03 (11)C4—C5—C6121.26 (12)
C14—C15—C16121.06 (12)O2—C3—C4117.85 (12)
C11—C12—C13118.41 (12)O2—C3—C2121.27 (11)
C11—C12—C17120.70 (13)C4—C3—C2120.88 (12)
C13—C12—C17120.89 (13)C1—C2—C3118.26 (11)
O5—C13—C14117.79 (12)C1—C2—C7120.55 (12)
O5—C13—C12121.53 (12)C3—C2—C7121.19 (12)
C14—C13—C12120.67 (12)C6—C1—C2121.50 (12)
C16—C11—C12121.62 (12)C6—C1—H1119.2
C16—C11—H11119.2C2—C1—H1119.2
C12—C11—H11119.2C3—O2—H2109.5
O4—C18—C19109.46 (11)O3—C7—C2125.35 (14)
O4—C18—H18A109.8O3—C7—H7117.3
C19—C18—H18A109.8C2—C7—H7117.3
O4—C18—H18B109.8C10—C9—C8178.40 (17)
C19—C18—H18B109.8O1—C8—C9108.67 (12)
H18A—C18—H18B108.2O1—C8—H8A110.0
C20—C19—C18177.13 (16)C9—C8—H8A110.0
O6—C17—C12125.79 (15)O1—C8—H8B110.0
O6—C17—H17117.1C9—C8—H8B110.0
C12—C17—H17117.1H8A—C8—H8B108.3
C19—C20—H20178.1 (11)C9—C10—H10177.5 (13)
C18—O4—C15—C14−2.4 (2)C8—O1—C5—C4−3.0 (2)
C18—O4—C15—C16177.32 (13)C8—O1—C5—C6177.38 (12)
C13—C14—C15—O4179.71 (12)C3—C4—C5—O1−179.63 (12)
C13—C14—C15—C160.0 (2)C3—C4—C5—C60.0 (2)
C11—C16—C15—O4−179.91 (12)C1—C6—C5—O1180.00 (12)
C11—C16—C15—C14−0.2 (2)C1—C6—C5—C40.4 (2)
C15—C14—C13—O5−179.31 (12)C5—C4—C3—O2179.81 (13)
C15—C14—C13—C120.0 (2)C5—C4—C3—C2−0.3 (2)
C11—C12—C13—O5179.36 (13)O2—C3—C2—C1−179.83 (13)
C17—C12—C13—O5−0.9 (2)C4—C3—C2—C10.3 (2)
C11—C12—C13—C140.0 (2)O2—C3—C2—C70.1 (2)
C17—C12—C13—C14179.81 (13)C4—C3—C2—C7−179.79 (13)
C15—C16—C11—C120.3 (2)C5—C6—C1—C2−0.4 (2)
C13—C12—C11—C16−0.2 (2)C3—C2—C1—C60.1 (2)
C17—C12—C11—C16−179.99 (13)C7—C2—C1—C6−179.87 (13)
C15—O4—C18—C19−177.04 (12)C1—C2—C7—O3179.84 (15)
O4—C18—C19—C20−179 (100)C3—C2—C7—O3−0.1 (2)
C11—C12—C17—O6−179.95 (16)C5—O1—C8—C9179.39 (13)
C13—C12—C17—O60.3 (3)C10—C9—C8—O1−162 (7)
D—H···AD—HH···AD···AD—H···A
O2—H2···O30.821.922.6387 (16)146
O5—H5···O60.821.932.6441 (16)146
C10—H10···O3i0.86 (2)2.51 (2)3.369 (2)171.4 (2)
C18—H18A···O5ii0.972.453.281 (2)144
C20—H20···O6i0.91 (2)2.37 (2)3.280 (2)178.8 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯O30.821.922.6387 (16)146
O5—H5⋯O60.821.932.6441 (16)146
C10—H10⋯O3i 0.86 (2)2.51 (2)3.369 (2)171.4 (2)
C18—H18A⋯O5ii 0.972.453.281 (2)144
C20—H20⋯O6i 0.91 (2)2.37 (2)3.280 (2)178.8 (2)

Symmetry codes: (i) ; (ii) .

  5 in total

1.  Synthesis and biological evaluation of a novel series of bis-salicylaldehydes as mushroom tyrosinase inhibitors.

Authors:  Giovanna Delogu; Gianni Podda; Marcella Corda; Maria Benedetta Fadda; Antonella Fais; Benedetta Era
Journal:  Bioorg Med Chem Lett       Date:  2010-08-10       Impact factor: 2.823

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Hydroxy- or methoxy-substituted benzaldoximes and benzaldehyde-O-alkyloximes as tyrosinase inhibitors.

Authors:  J P Ley; H J Bertram
Journal:  Bioorg Med Chem       Date:  2001-07       Impact factor: 3.641

4.  2,4-Bis[(prop-2-yn-yl)-oxy]benzaldehyde.

Authors:  M Esakkiammal; V Selvarani; M A Neelakantan; V Silambarasan; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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