Literature DB >> 23476406

1-(2-Chloro-benzo-yl)-3-(3-meth-oxy-phen-yl)thio-urea.

M Khawar Rauf1, Masahiro Ebihara, Amin Badshah.   

Abstract

The title compound, C15H13ClN2O2S, exists in the solid state in its thione form with typical thio-urea C-S and C-O bonds lengths as well as shortened C-N bonds. An intra-molecular N-H⋯O hydrogen bond stabilizes the mol-ecular conformation. In the crystal, N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2012        PMID: 23476406      PMCID: PMC3588307          DOI: 10.1107/S1600536812048830

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For previous work on N,N′-disubstituted thio­ureas, see: Rauf et al. (2012 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C15H13ClN2O2S M = 320.78 Triclinic, a = 6.276 (3) Å b = 10.202 (5) Å c = 11.411 (5) Å α = 94.541 (7)° β = 93.305 (6)° γ = 96.918 (7)° V = 721.3 (6) Å3 Z = 2 Mo Kα radiation μ = 0.41 mm−1 T = 123 K 0.45 × 0.36 × 0.20 mm

Data collection

Rigaku/MSC Mercury CCD diffractometer 5698 measured reflections 3222 independent reflections 3071 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.088 S = 1.09 3222 reflections 191 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.34 e Å−3 Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: Yadokari-XG (Wakita, 2001 ▶; Kabuto et al., 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812048830/mw2100sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812048830/mw2100Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812048830/mw2100Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13ClN2O2SZ = 2
Mr = 320.78F(000) = 332
Triclinic, P1Dx = 1.477 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71070 Å
a = 6.276 (3) ÅCell parameters from 2546 reflections
b = 10.202 (5) Åθ = 3.3–27.5°
c = 11.411 (5) ŵ = 0.41 mm1
α = 94.541 (7)°T = 123 K
β = 93.305 (6)°Block, colorless
γ = 96.918 (7)°0.45 × 0.36 × 0.20 mm
V = 721.3 (6) Å3
Rigaku/MSC Mercury CCD diffractometer3071 reflections with I > 2σ(I)
Radiation source: Rotating AnodeRint = 0.052
Graphite Monochromator monochromatorθmax = 27.5°, θmin = 3.3°
Detector resolution: 14.62 pixels mm-1h = −8→5
ω scansk = −13→13
5698 measured reflectionsl = −14→14
3222 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0309P)2 + 0.5054P] where P = (Fo2 + 2Fc2)/3
3222 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6542 (2)0.57142 (13)0.79707 (12)0.0144 (3)
O10.58303 (17)0.56062 (10)0.89370 (9)0.0186 (2)
N10.56572 (19)0.49567 (12)0.69582 (11)0.0155 (2)
H10.63640.50520.63200.019*
C20.3774 (2)0.40595 (13)0.68314 (13)0.0147 (3)
S10.28505 (7)0.34880 (4)0.54559 (3)0.02392 (12)
N20.28727 (18)0.37856 (12)0.78283 (10)0.0148 (2)
H20.36600.40850.84790.018*
C30.8470 (2)0.66726 (14)0.77733 (12)0.0149 (3)
C40.8823 (2)0.79519 (14)0.83489 (13)0.0168 (3)
C51.0642 (3)0.88129 (15)0.81696 (14)0.0217 (3)
H51.08630.96780.85660.026*
C61.2135 (2)0.84109 (16)0.74122 (15)0.0236 (3)
H61.33790.90010.72920.028*
C71.1816 (2)0.71488 (16)0.68298 (14)0.0219 (3)
H71.28370.68750.63090.026*
C80.9996 (2)0.62846 (15)0.70116 (13)0.0179 (3)
H80.97870.54200.66140.021*
Cl10.69817 (6)0.85411 (4)0.92737 (3)0.02243 (11)
C90.0829 (2)0.30814 (13)0.79995 (12)0.0141 (3)
C10−0.0238 (2)0.20764 (14)0.72013 (13)0.0166 (3)
H100.03990.18010.65030.020*
C11−0.2262 (2)0.14852 (14)0.74534 (13)0.0164 (3)
C12−0.3209 (2)0.18776 (14)0.84774 (13)0.0181 (3)
H12−0.46050.14820.86270.022*
C13−0.2092 (2)0.28502 (15)0.92748 (13)0.0186 (3)
H13−0.27120.31070.99840.022*
C14−0.0068 (2)0.34540 (14)0.90434 (13)0.0169 (3)
H140.06970.41160.95950.020*
O2−0.34498 (17)0.04884 (11)0.67328 (10)0.0236 (3)
C15−0.2488 (3)0.00094 (16)0.57046 (14)0.0243 (3)
H15C−0.21940.07320.51970.037*
H15A−0.3473−0.07100.52740.037*
H15B−0.1138−0.03220.59370.037*
U11U22U33U12U13U23
C10.0126 (6)0.0132 (6)0.0166 (7)−0.0001 (5)−0.0020 (5)0.0008 (5)
O10.0193 (5)0.0203 (5)0.0144 (5)−0.0045 (4)0.0003 (4)0.0006 (4)
N10.0148 (6)0.0161 (6)0.0139 (6)−0.0037 (4)0.0018 (4)−0.0010 (4)
C20.0147 (6)0.0110 (6)0.0176 (7)−0.0007 (5)0.0001 (5)−0.0003 (5)
S10.0298 (2)0.0236 (2)0.01342 (19)−0.01405 (15)0.00077 (14)−0.00207 (14)
N20.0127 (5)0.0153 (6)0.0147 (6)−0.0028 (4)−0.0013 (4)−0.0005 (4)
C30.0137 (6)0.0156 (6)0.0141 (6)−0.0021 (5)−0.0029 (5)0.0029 (5)
C40.0175 (7)0.0171 (7)0.0147 (6)−0.0009 (5)−0.0030 (5)0.0017 (5)
C50.0230 (7)0.0183 (7)0.0207 (7)−0.0069 (6)−0.0058 (6)0.0030 (6)
C60.0161 (7)0.0268 (8)0.0260 (8)−0.0070 (6)−0.0048 (6)0.0099 (6)
C70.0136 (7)0.0283 (8)0.0239 (8)0.0003 (6)0.0003 (5)0.0071 (6)
C80.0148 (6)0.0184 (7)0.0197 (7)0.0001 (5)−0.0022 (5)0.0026 (5)
Cl10.0263 (2)0.01867 (18)0.02099 (19)0.00013 (14)0.00284 (14)−0.00308 (13)
C90.0124 (6)0.0128 (6)0.0164 (7)−0.0008 (5)−0.0007 (5)0.0031 (5)
C100.0163 (7)0.0162 (7)0.0163 (7)−0.0011 (5)0.0027 (5)−0.0015 (5)
C110.0152 (6)0.0144 (6)0.0183 (7)−0.0021 (5)−0.0003 (5)−0.0002 (5)
C120.0144 (6)0.0178 (7)0.0220 (7)−0.0003 (5)0.0042 (5)0.0033 (5)
C130.0204 (7)0.0188 (7)0.0168 (7)0.0020 (5)0.0047 (5)0.0009 (5)
C140.0186 (7)0.0150 (6)0.0159 (7)−0.0002 (5)−0.0004 (5)−0.0005 (5)
O20.0190 (5)0.0236 (6)0.0239 (6)−0.0095 (4)0.0047 (4)−0.0077 (4)
C150.0230 (7)0.0252 (8)0.0220 (8)−0.0020 (6)0.0012 (6)−0.0074 (6)
C1—O11.2213 (18)C7—H70.9500
C1—N11.3862 (18)C8—H80.9500
C1—C31.5007 (19)C9—C141.392 (2)
N1—C21.3981 (18)C9—C101.3948 (19)
N1—H10.8800C10—C111.394 (2)
C2—N21.3334 (19)C10—H100.9500
C2—S11.6758 (16)C11—O21.3713 (17)
N2—C91.4243 (18)C11—C121.394 (2)
N2—H20.8800C12—C131.385 (2)
C3—C41.401 (2)C12—H120.9500
C3—C81.401 (2)C13—C141.393 (2)
C4—C51.389 (2)C13—H130.9500
C4—Cl11.7370 (16)C14—H140.9500
C5—C61.387 (2)O2—C151.4288 (19)
C5—H50.9500C15—H15C0.9800
C6—C71.388 (2)C15—H15A0.9800
C6—H60.9500C15—H15B0.9800
C7—C81.392 (2)
O1—C1—N1123.20 (13)C7—C8—H8119.6
O1—C1—C3122.98 (12)C3—C8—H8119.6
N1—C1—C3113.82 (12)C14—C9—C10120.87 (13)
C1—N1—C2127.64 (12)C14—C9—N2115.32 (12)
C1—N1—H1116.2C10—C9—N2123.81 (13)
C2—N1—H1116.2C11—C10—C9118.42 (13)
N2—C2—N1115.74 (12)C11—C10—H10120.8
N2—C2—S1127.15 (11)C9—C10—H10120.8
N1—C2—S1117.08 (11)O2—C11—C12115.39 (13)
C2—N2—C9129.80 (12)O2—C11—C10123.32 (13)
C2—N2—H2115.1C12—C11—C10121.30 (13)
C9—N2—H2115.1C13—C12—C11119.29 (13)
C4—C3—C8118.29 (13)C13—C12—H12120.4
C4—C3—C1121.86 (13)C11—C12—H12120.4
C8—C3—C1119.84 (13)C12—C13—C14120.44 (13)
C5—C4—C3120.81 (14)C12—C13—H13119.8
C5—C4—Cl1117.49 (12)C14—C13—H13119.8
C3—C4—Cl1121.67 (11)C9—C14—C13119.61 (13)
C6—C5—C4120.05 (14)C9—C14—H14120.2
C6—C5—H5120.0C13—C14—H14120.2
C4—C5—H5120.0C11—O2—C15117.13 (12)
C5—C6—C7120.15 (14)O2—C15—H15C109.5
C5—C6—H6119.9O2—C15—H15A109.5
C7—C6—H6119.9H15C—C15—H15A109.5
C6—C7—C8119.81 (15)O2—C15—H15B109.5
C6—C7—H7120.1H15C—C15—H15B109.5
C8—C7—H7120.1H15A—C15—H15B109.5
C7—C8—C3120.88 (14)
O1—C1—N1—C26.0 (2)C6—C7—C8—C30.3 (2)
C3—C1—N1—C2−174.52 (13)C4—C3—C8—C7−0.1 (2)
C1—N1—C2—N2−8.8 (2)C1—C3—C8—C7−178.91 (13)
C1—N1—C2—S1169.20 (12)C2—N2—C9—C14−151.59 (15)
N1—C2—N2—C9169.91 (13)C2—N2—C9—C1028.9 (2)
S1—C2—N2—C9−7.9 (2)C14—C9—C10—C112.3 (2)
O1—C1—C3—C4−39.5 (2)N2—C9—C10—C11−178.27 (13)
N1—C1—C3—C4141.05 (14)C9—C10—C11—O2−179.88 (14)
O1—C1—C3—C8139.31 (15)C9—C10—C11—C12−0.2 (2)
N1—C1—C3—C8−40.16 (18)O2—C11—C12—C13177.99 (13)
C8—C3—C4—C5−0.1 (2)C10—C11—C12—C13−1.7 (2)
C1—C3—C4—C5178.72 (13)C11—C12—C13—C141.6 (2)
C8—C3—C4—Cl1177.95 (11)C10—C9—C14—C13−2.4 (2)
C1—C3—C4—Cl1−3.24 (19)N2—C9—C14—C13178.10 (13)
C3—C4—C5—C60.1 (2)C12—C13—C14—C90.4 (2)
Cl1—C4—C5—C6−178.03 (12)C12—C11—O2—C15−176.82 (14)
C4—C5—C6—C70.1 (2)C10—C11—O2—C152.9 (2)
C5—C6—C7—C8−0.3 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.881.952.6500 (17)135
N1—H1···S1i0.882.643.4080 (17)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O10.881.952.6500 (17)135
N1—H1⋯S1i 0.882.643.4080 (17)146

Symmetry code: (i) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  1-Benzoyl-3-(4-n-butyl-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-14
  3 in total

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