Literature DB >> 23476385

Methyl 4-(4-chloro-phen-yl)-8-iodo-2-methyl-6-oxo-1,6-dihydro-4H-pyrimido[2,1-b]quinazoline-3-carboxyl-ate.

Susanta K Nayak1, K N Venugopala, Bharti Odhav.   

Abstract

In the title compound, C20H15ClIN3O3, the dihedral angle between the quinazolinone ring system [r.m.s. deviation = 0.047 (2) Å] and the pendant benzene ring is 82.63 (11)°. The mol-ecular conformation is stabilized by intra-molecular C-H⋯O inter-actions. In the crystal, the mol-ecules are linked by N-H⋯O hydrogen bonds into chains along the a-axis direction. Another set of chains propagating along [101] is formed due to inter-molecular I⋯Cl short contacts of 3.427 (1) Å, thus giving layers parallel to (010). The layers are connected by C-H⋯π and π-π inter-actions, the shortest distance between the centroids of aromatic rings being 3.8143 (16) Å.

Entities:  

Year:  2012        PMID: 23476385      PMCID: PMC3588318          DOI: 10.1107/S1600536812050787

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For crystal structures of dihydro­pyrimidines, see: Nayak et al. (2010 ▶, 2011a ▶,b ▶,c ▶); Venugopala et al. (2012 ▶). For applications of dihydro­pyrimidines, see: Kappe (2000 ▶). For halogen-involving inter­actions, see: Nayak et al. (2011b ▶).

Experimental

Crystal data

C20H15ClIN3O3 M = 507.70 Triclinic, a = 7.3443 (15) Å b = 10.847 (2) Å c = 12.475 (3) Å α = 106.66 (3)° β = 103.53 (2)° γ = 92.79 (3)° V = 918.5 (4) Å3 Z = 2 Mo Kα radiation μ = 1.92 mm−1 T = 173 K 0.25 × 0.14 × 0.12 mm

Data collection

Bruker APEXII Kappa DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.646, T max = 0.803 7109 measured reflections 3602 independent reflections 3147 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.059 S = 1.09 3602 reflections 255 parameters H-atom parameters constrained Δρmax = 0.89 e Å−3 Δρmin = −0.52 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and PARST (Nardelli, 1995 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812050787/yk2082sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812050787/yk2082Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812050787/yk2082Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H15ClIN3O3Z = 2
Mr = 507.70F(000) = 500
Triclinic, P1Dx = 1.836 Mg m3
Hall symbol: -P 1Melting point: 467(2) K
a = 7.3443 (15) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.847 (2) ÅCell parameters from 560 reflections
c = 12.475 (3) Åθ = 2.9–26.0°
α = 106.66 (3)°µ = 1.92 mm1
β = 103.53 (2)°T = 173 K
γ = 92.79 (3)°Plate, yellow
V = 918.5 (4) Å30.25 × 0.14 × 0.12 mm
Bruker APEXII Kappa DUO CCD diffractometer3602 independent reflections
Radiation source: fine-focus sealed tube3147 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.017
0.5° φ scans and ω scansθmax = 26.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −9→9
Tmin = 0.646, Tmax = 0.803k = −13→13
7109 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.059H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0285P)2 + 0.4298P] where P = (Fo2 + 2Fc2)/3
3602 reflections(Δ/σ)max = 0.003
255 parametersΔρmax = 0.89 e Å3
0 restraintsΔρmin = −0.52 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I11.42667 (2)0.047532 (17)1.168961 (15)0.02807 (8)
Cl10.75652 (11)−0.07966 (7)0.33638 (6)0.03791 (19)
O10.6050 (3)0.62853 (18)0.61509 (16)0.0272 (4)
O20.9047 (3)0.59136 (19)0.62752 (17)0.0287 (4)
O31.2104 (2)0.34709 (18)0.86038 (16)0.0250 (4)
N10.5905 (3)0.4115 (2)0.84598 (19)0.0238 (5)
H10.48420.39150.86170.029*
N20.9040 (3)0.3772 (2)0.85309 (17)0.0184 (4)
N30.7400 (3)0.3144 (2)0.97648 (19)0.0235 (5)
C10.6278 (4)0.7087 (3)0.5443 (3)0.0312 (7)
H1A0.73080.77890.58740.047*
H1B0.51040.74570.52320.047*
H1C0.65770.65620.47380.047*
C20.7579 (4)0.5753 (2)0.6529 (2)0.0205 (6)
C30.7317 (3)0.4945 (2)0.7260 (2)0.0185 (5)
C40.5854 (4)0.4883 (2)0.7733 (2)0.0208 (5)
C50.4109 (4)0.5552 (3)0.7604 (3)0.0270 (6)
H5A0.43790.63580.74320.041*
H5B0.37120.57510.83260.041*
H5C0.30970.49830.69690.041*
C60.8863 (3)0.4093 (2)0.7435 (2)0.0182 (5)
H61.00840.45880.74910.022*
C70.8535 (3)0.2847 (2)0.6416 (2)0.0180 (5)
C80.9062 (4)0.2870 (3)0.5422 (2)0.0230 (6)
H80.96570.36530.53920.028*
C90.8728 (4)0.1763 (3)0.4471 (2)0.0268 (6)
H90.90640.17900.37870.032*
C100.7903 (4)0.0623 (3)0.4531 (2)0.0261 (6)
C110.7360 (4)0.0575 (3)0.5507 (2)0.0270 (6)
H110.6781−0.02130.55360.032*
C120.7672 (4)0.1693 (3)0.6445 (2)0.0231 (6)
H120.72900.16690.71160.028*
C130.7476 (4)0.3651 (2)0.8947 (2)0.0192 (5)
C140.8986 (4)0.2618 (2)1.0197 (2)0.0212 (6)
C150.8893 (4)0.1949 (3)1.0998 (2)0.0262 (6)
H150.77880.19131.12650.031*
C161.0389 (4)0.1347 (3)1.1397 (2)0.0264 (6)
H161.03000.08751.19210.032*
C171.2046 (4)0.1424 (3)1.1035 (2)0.0233 (6)
C181.2198 (4)0.2091 (3)1.0265 (2)0.0227 (6)
H181.33250.21431.00220.027*
C191.0655 (4)0.2691 (2)0.9845 (2)0.0194 (5)
C201.0732 (4)0.3341 (2)0.8977 (2)0.0194 (5)
U11U22U33U12U13U23
I10.02738 (11)0.03098 (12)0.02945 (11)0.00738 (8)0.00520 (8)0.01593 (8)
Cl10.0363 (4)0.0311 (4)0.0339 (4)0.0142 (3)−0.0019 (3)−0.0018 (3)
O10.0242 (10)0.0311 (11)0.0342 (11)0.0093 (8)0.0084 (9)0.0202 (9)
O20.0265 (11)0.0315 (11)0.0400 (12)0.0078 (8)0.0166 (9)0.0220 (9)
O30.0167 (9)0.0348 (11)0.0314 (10)0.0061 (8)0.0103 (8)0.0185 (9)
N10.0154 (11)0.0320 (13)0.0320 (13)0.0073 (9)0.0111 (10)0.0173 (10)
N20.0153 (11)0.0229 (12)0.0202 (11)0.0031 (9)0.0065 (9)0.0097 (9)
N30.0213 (12)0.0289 (13)0.0247 (12)0.0064 (10)0.0095 (10)0.0115 (10)
C10.0335 (16)0.0341 (17)0.0321 (16)0.0071 (13)0.0055 (13)0.0215 (13)
C20.0221 (14)0.0174 (13)0.0205 (13)0.0040 (11)0.0037 (11)0.0044 (11)
C30.0159 (13)0.0186 (13)0.0205 (13)0.0023 (10)0.0037 (10)0.0060 (11)
C40.0209 (14)0.0191 (13)0.0231 (13)0.0042 (11)0.0047 (11)0.0080 (11)
C50.0230 (14)0.0303 (15)0.0363 (16)0.0118 (12)0.0140 (13)0.0168 (13)
C60.0167 (12)0.0228 (14)0.0194 (13)0.0034 (10)0.0069 (10)0.0113 (11)
C70.0121 (12)0.0223 (14)0.0220 (13)0.0069 (10)0.0039 (10)0.0103 (11)
C80.0208 (14)0.0261 (15)0.0264 (14)0.0047 (11)0.0102 (11)0.0113 (12)
C90.0237 (14)0.0353 (17)0.0237 (14)0.0103 (13)0.0078 (12)0.0100 (12)
C100.0210 (14)0.0263 (15)0.0251 (14)0.0107 (12)−0.0004 (12)0.0027 (12)
C110.0242 (15)0.0211 (15)0.0360 (16)0.0041 (12)0.0032 (12)0.0128 (13)
C120.0227 (14)0.0247 (15)0.0254 (14)0.0046 (11)0.0077 (12)0.0113 (12)
C130.0176 (13)0.0205 (13)0.0199 (13)0.0040 (10)0.0070 (11)0.0046 (11)
C140.0221 (14)0.0218 (14)0.0198 (13)0.0045 (11)0.0056 (11)0.0058 (11)
C150.0260 (15)0.0340 (16)0.0237 (14)0.0041 (12)0.0122 (12)0.0119 (12)
C160.0308 (15)0.0312 (16)0.0217 (14)0.0047 (12)0.0079 (12)0.0141 (12)
C170.0256 (14)0.0240 (14)0.0202 (13)0.0057 (11)0.0042 (11)0.0075 (11)
C180.0223 (14)0.0247 (14)0.0220 (14)0.0044 (11)0.0066 (11)0.0079 (11)
C190.0183 (13)0.0212 (13)0.0192 (13)0.0014 (11)0.0052 (10)0.0070 (11)
C200.0187 (13)0.0193 (13)0.0190 (13)0.0023 (10)0.0029 (11)0.0058 (11)
I1—C172.099 (3)C5—H5C0.9800
Cl1—C101.750 (3)C6—C71.530 (4)
O1—C21.338 (3)C6—H61.0000
O1—C11.436 (3)C7—C121.389 (4)
O2—C21.211 (3)C7—C81.390 (3)
O3—C201.223 (3)C8—C91.389 (4)
N1—C131.363 (3)C8—H80.9500
N1—C41.392 (3)C9—C101.379 (4)
N1—H10.8800C9—H90.9500
N2—C131.382 (3)C10—C111.380 (4)
N2—C201.398 (3)C11—C121.388 (4)
N2—C61.483 (3)C11—H110.9500
N3—C131.301 (3)C12—H120.9500
N3—C141.386 (3)C14—C191.401 (4)
C1—H1A0.9800C14—C151.404 (4)
C1—H1B0.9800C15—C161.372 (4)
C1—H1C0.9800C15—H150.9500
C2—C31.469 (3)C16—C171.401 (4)
C3—C41.349 (3)C16—H160.9500
C3—C61.515 (3)C17—C181.379 (4)
C4—C51.502 (4)C18—C191.405 (4)
C5—H5A0.9800C18—H180.9500
C5—H5B0.9800C19—C201.461 (3)
C2—O1—C1115.4 (2)C9—C8—H8119.6
C13—N1—C4125.0 (2)C7—C8—H8119.6
C13—N1—H1117.5C10—C9—C8119.3 (3)
C4—N1—H1117.5C10—C9—H9120.4
C13—N2—C20121.4 (2)C8—C9—H9120.4
C13—N2—C6120.6 (2)C9—C10—C11121.1 (3)
C20—N2—C6116.72 (19)C9—C10—Cl1119.8 (2)
C13—N3—C14116.7 (2)C11—C10—Cl1119.1 (2)
O1—C1—H1A109.5C10—C11—C12119.1 (3)
O1—C1—H1B109.5C10—C11—H11120.4
H1A—C1—H1B109.5C12—C11—H11120.4
O1—C1—H1C109.5C11—C12—C7120.9 (2)
H1A—C1—H1C109.5C11—C12—H12119.5
H1B—C1—H1C109.5C7—C12—H12119.5
O2—C2—O1122.5 (2)N3—C13—N1118.2 (2)
O2—C2—C3123.1 (2)N3—C13—N2125.2 (2)
O1—C2—C3114.4 (2)N1—C13—N2116.6 (2)
C4—C3—C2126.5 (2)N3—C14—C19122.9 (2)
C4—C3—C6119.8 (2)N3—C14—C15118.4 (2)
C2—C3—C6113.7 (2)C19—C14—C15118.7 (2)
C3—C4—N1118.3 (2)C16—C15—C14120.4 (2)
C3—C4—C5129.1 (2)C16—C15—H15119.8
N1—C4—C5112.6 (2)C14—C15—H15119.8
C4—C5—H5A109.5C15—C16—C17120.3 (2)
C4—C5—H5B109.5C15—C16—H16119.8
H5A—C5—H5B109.5C17—C16—H16119.8
C4—C5—H5C109.5C18—C17—C16120.8 (2)
H5A—C5—H5C109.5C18—C17—I1121.37 (19)
H5B—C5—H5C109.5C16—C17—I1117.80 (19)
N2—C6—C3111.06 (19)C17—C18—C19118.7 (2)
N2—C6—C7110.0 (2)C17—C18—H18120.6
C3—C6—C7111.7 (2)C19—C18—H18120.6
N2—C6—H6108.0C14—C19—C18121.0 (2)
C3—C6—H6108.0C14—C19—C20118.9 (2)
C7—C6—H6108.0C18—C19—C20120.0 (2)
C12—C7—C8118.8 (2)O3—C20—N2120.3 (2)
C12—C7—C6121.6 (2)O3—C20—C19125.0 (2)
C8—C7—C6119.6 (2)N2—C20—C19114.7 (2)
C9—C8—C7120.7 (3)
C1—O1—C2—O2−1.3 (4)C6—C7—C12—C11179.1 (2)
C1—O1—C2—C3179.5 (2)C14—N3—C13—N1176.6 (2)
O2—C2—C3—C4168.5 (3)C14—N3—C13—N2−4.1 (4)
O1—C2—C3—C4−12.4 (4)C4—N1—C13—N3168.0 (2)
O2—C2—C3—C6−13.4 (4)C4—N1—C13—N2−11.4 (4)
O1—C2—C3—C6165.8 (2)C20—N2—C13—N30.0 (4)
C2—C3—C4—N1−176.2 (2)C6—N2—C13—N3166.5 (2)
C6—C3—C4—N15.7 (4)C20—N2—C13—N1179.3 (2)
C2—C3—C4—C53.0 (5)C6—N2—C13—N1−14.2 (3)
C6—C3—C4—C5−175.0 (3)C13—N3—C14—C194.3 (4)
C13—N1—C4—C315.7 (4)C13—N3—C14—C15−173.8 (2)
C13—N1—C4—C5−163.7 (2)N3—C14—C15—C16176.1 (3)
C13—N2—C6—C331.8 (3)C19—C14—C15—C16−2.0 (4)
C20—N2—C6—C3−161.1 (2)C14—C15—C16—C171.8 (4)
C13—N2—C6—C7−92.5 (3)C15—C16—C17—C18−0.7 (4)
C20—N2—C6—C774.6 (3)C15—C16—C17—I1179.9 (2)
C4—C3—C6—N2−27.2 (3)C16—C17—C18—C19−0.1 (4)
C2—C3—C6—N2154.5 (2)I1—C17—C18—C19179.16 (19)
C4—C3—C6—C796.0 (3)N3—C14—C19—C18−176.9 (2)
C2—C3—C6—C7−82.2 (3)C15—C14—C19—C181.1 (4)
N2—C6—C7—C1227.4 (3)N3—C14—C19—C20−0.5 (4)
C3—C6—C7—C12−96.5 (3)C15—C14—C19—C20177.5 (2)
N2—C6—C7—C8−154.5 (2)C17—C18—C19—C14−0.1 (4)
C3—C6—C7—C881.7 (3)C17—C18—C19—C20−176.4 (2)
C12—C7—C8—C90.2 (4)C13—N2—C20—O3−179.2 (2)
C6—C7—C8—C9−178.0 (2)C6—N2—C20—O313.8 (3)
C7—C8—C9—C10−1.5 (4)C13—N2—C20—C193.8 (3)
C8—C9—C10—C111.7 (4)C6—N2—C20—C19−163.2 (2)
C8—C9—C10—Cl1−177.3 (2)C14—C19—C20—O3179.8 (3)
C9—C10—C11—C12−0.6 (4)C18—C19—C20—O3−3.8 (4)
Cl1—C10—C11—C12178.3 (2)C14—C19—C20—N2−3.4 (3)
C10—C11—C12—C7−0.7 (4)C18—C19—C20—N2173.0 (2)
C8—C7—C12—C110.9 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O3i0.882.042.903 (3)167
C5—H5A···O10.982.222.807 (4)117
C8—H8···O20.952.493.167 (4)128
C1—H1B···Cg1ii0.982.673.647 (4)175
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C7–C12 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O3i 0.882.042.903 (3)167
C5—H5A⋯O10.982.222.807 (4)117
C8—H8⋯O20.952.493.167 (4)128
C1—H1BCg1ii 0.982.673.647 (4)175

Symmetry codes: (i) ; (ii) .

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