| Literature DB >> 23476369 |
Shaaban K Mohamed1, Mehmet Akkurt, Peter N Horton, Antar A Abdelhamid, Adel A Marzouk.
Abstract
The mol-ecular conformation of the title compound, C13H8BrFN2O3, is essentially planar, with maximum deviations of 0.076 (1) and -0.080 (2) Å for the O atoms of the NO2 group. The mol-ecular conformation is stabilized by an intra-molecular O-H⋯N hydrogen bond, forming an S(6) ring motif. In the crystal, pairs of mol-ecules are linked via two pairs of C-H⋯O hydrogen bonds, forming inversion dimers that enclose R(2)2(7)R(2)2(10)R(2)2(7) ring motifs.Entities:
Year: 2012 PMID: 23476369 PMCID: PMC3588360 DOI: 10.1107/S1600536812050696
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H8BrFN2O3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4566 reflections |
| θ = 2.5–31.2° | |
| µ = 3.36 mm−1 | |
| β = 95.484 (5)° | Rod, yellow |
| 0.24 × 0.04 × 0.03 mm | |
| Rigaku AFC12 (Right) diffractometer | 2811 independent reflections |
| Radiation source: Rotating Anode | 2633 reflections with |
| Detector resolution: 28.5714 pixels mm-1 | |
| profile data from ω–scans | θmax = 27.5°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 8107 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2811 reflections | (Δ/σ)max = 0.001 |
| 182 parameters | Δρmax = 0.52 e Å−3 |
| 0 restraints | Δρmin = −0.54 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| Br1 | −0.15532 (4) | 0.22619 (1) | 0.43736 (1) | 0.0188 (1) | |
| F1 | 0.7510 (2) | 0.50903 (6) | 0.05672 (7) | 0.0202 (3) | |
| O1 | 0.2171 (3) | 0.37891 (7) | 0.09274 (9) | 0.0171 (4) | |
| O2 | 1.5039 (3) | 0.63282 (8) | 0.41030 (11) | 0.0290 (4) | |
| O3 | 1.2227 (5) | 0.56614 (11) | 0.48212 (12) | 0.0614 (8) | |
| N1 | 0.5847 (3) | 0.44689 (7) | 0.21201 (11) | 0.0140 (4) | |
| N2 | 1.3057 (4) | 0.59101 (9) | 0.40914 (12) | 0.0227 (5) | |
| C1 | 0.2662 (4) | 0.36222 (8) | 0.26646 (12) | 0.0123 (5) | |
| C2 | 0.1398 (4) | 0.34652 (9) | 0.17204 (12) | 0.0135 (5) | |
| C3 | −0.0742 (4) | 0.29535 (9) | 0.15895 (13) | 0.0157 (5) | |
| C4 | −0.1635 (4) | 0.26099 (9) | 0.23746 (13) | 0.0159 (5) | |
| C5 | −0.0389 (4) | 0.27669 (9) | 0.33084 (12) | 0.0140 (5) | |
| C6 | 0.1728 (4) | 0.32683 (9) | 0.34603 (12) | 0.0145 (5) | |
| C7 | 0.4936 (4) | 0.41399 (9) | 0.28338 (13) | 0.0138 (5) | |
| C8 | 0.8050 (4) | 0.49730 (9) | 0.22592 (13) | 0.0136 (5) | |
| C9 | 0.8877 (4) | 0.52873 (9) | 0.14215 (12) | 0.0150 (5) | |
| C10 | 1.0992 (4) | 0.57931 (9) | 0.14290 (13) | 0.0165 (5) | |
| C11 | 1.2365 (4) | 0.60049 (9) | 0.23159 (13) | 0.0157 (5) | |
| C12 | 1.1566 (4) | 0.56969 (9) | 0.31484 (13) | 0.0156 (5) | |
| C13 | 0.9451 (4) | 0.51880 (9) | 0.31435 (13) | 0.0154 (5) | |
| H1 | 0.34830 | 0.40790 | 0.10930 | 0.0260* | |
| H3 | −0.15830 | 0.28430 | 0.09540 | 0.0190* | |
| H4 | −0.31010 | 0.22660 | 0.22810 | 0.0190* | |
| H6 | 0.25500 | 0.33730 | 0.41000 | 0.0170* | |
| H7 | 0.57530 | 0.42350 | 0.34770 | 0.0170* | |
| H10 | 1.14920 | 0.59910 | 0.08410 | 0.0200* | |
| H11 | 1.38190 | 0.63530 | 0.23510 | 0.0190* | |
| H13 | 0.89690 | 0.49900 | 0.37330 | 0.0180* |
| Br1 | 0.0189 (1) | 0.0213 (1) | 0.0161 (1) | −0.0045 (1) | 0.0003 (1) | 0.0053 (1) |
| F1 | 0.0209 (6) | 0.0273 (6) | 0.0115 (5) | −0.0064 (5) | −0.0028 (4) | 0.0011 (4) |
| O1 | 0.0208 (7) | 0.0184 (6) | 0.0119 (6) | −0.0042 (5) | 0.0007 (5) | 0.0008 (5) |
| O2 | 0.0326 (8) | 0.0292 (8) | 0.0243 (7) | −0.0159 (7) | −0.0022 (6) | −0.0043 (6) |
| O3 | 0.0880 (16) | 0.0804 (15) | 0.0135 (8) | −0.0628 (13) | −0.0074 (9) | 0.0082 (8) |
| N1 | 0.0128 (7) | 0.0141 (7) | 0.0150 (7) | 0.0001 (6) | 0.0013 (6) | −0.0005 (5) |
| N2 | 0.0290 (9) | 0.0228 (8) | 0.0156 (8) | −0.0085 (7) | −0.0011 (7) | −0.0008 (6) |
| C1 | 0.0110 (8) | 0.0124 (8) | 0.0136 (8) | 0.0021 (6) | 0.0011 (6) | −0.0003 (6) |
| C2 | 0.0137 (8) | 0.0135 (8) | 0.0133 (8) | 0.0026 (6) | 0.0015 (6) | 0.0004 (6) |
| C3 | 0.0156 (9) | 0.0171 (8) | 0.0140 (8) | 0.0000 (7) | −0.0011 (6) | −0.0047 (7) |
| C4 | 0.0145 (8) | 0.0144 (8) | 0.0186 (9) | −0.0005 (7) | 0.0001 (7) | −0.0018 (7) |
| C5 | 0.0144 (8) | 0.0148 (8) | 0.0127 (8) | 0.0009 (7) | 0.0015 (6) | 0.0021 (6) |
| C6 | 0.0147 (8) | 0.0160 (8) | 0.0125 (8) | 0.0014 (7) | 0.0000 (6) | 0.0002 (6) |
| C7 | 0.0123 (8) | 0.0151 (8) | 0.0137 (8) | 0.0012 (7) | −0.0005 (6) | −0.0014 (6) |
| C8 | 0.0129 (8) | 0.0129 (8) | 0.0151 (8) | 0.0007 (6) | 0.0016 (7) | −0.0003 (6) |
| C9 | 0.0139 (8) | 0.0179 (8) | 0.0125 (8) | 0.0022 (7) | −0.0023 (6) | −0.0014 (6) |
| C10 | 0.0164 (9) | 0.0166 (8) | 0.0167 (9) | 0.0011 (7) | 0.0022 (7) | 0.0036 (7) |
| C11 | 0.0155 (8) | 0.0126 (8) | 0.0191 (9) | −0.0009 (7) | 0.0017 (7) | 0.0007 (7) |
| C12 | 0.0163 (9) | 0.0155 (8) | 0.0145 (8) | −0.0004 (7) | −0.0010 (7) | −0.0021 (6) |
| C13 | 0.0160 (9) | 0.0159 (8) | 0.0143 (8) | −0.0009 (7) | 0.0012 (7) | 0.0007 (6) |
| Br1—C5 | 1.8980 (18) | C5—C6 | 1.380 (3) |
| F1—C9 | 1.339 (2) | C8—C13 | 1.390 (3) |
| O1—C2 | 1.347 (2) | C8—C9 | 1.399 (2) |
| O2—N2 | 1.218 (2) | C9—C10 | 1.383 (3) |
| O3—N2 | 1.215 (3) | C10—C11 | 1.387 (3) |
| O1—H1 | 0.8400 | C11—C12 | 1.383 (3) |
| N1—C7 | 1.284 (2) | C12—C13 | 1.387 (3) |
| N1—C8 | 1.409 (2) | C3—H3 | 0.9500 |
| N2—C12 | 1.473 (2) | C4—H4 | 0.9500 |
| C1—C6 | 1.405 (2) | C6—H6 | 0.9500 |
| C1—C7 | 1.453 (2) | C7—H7 | 0.9500 |
| C1—C2 | 1.411 (2) | C10—H10 | 0.9500 |
| C2—C3 | 1.399 (3) | C11—H11 | 0.9500 |
| C3—C4 | 1.376 (3) | C13—H13 | 0.9500 |
| C4—C5 | 1.395 (2) | ||
| C2—O1—H1 | 109.00 | F1—C9—C10 | 118.47 (15) |
| C7—N1—C8 | 121.86 (16) | C8—C9—C10 | 123.70 (16) |
| O2—N2—C12 | 118.63 (16) | C9—C10—C11 | 118.36 (16) |
| O3—N2—C12 | 118.09 (18) | C10—C11—C12 | 118.40 (17) |
| O2—N2—O3 | 123.29 (18) | N2—C12—C11 | 118.69 (16) |
| C2—C1—C7 | 121.43 (15) | C11—C12—C13 | 123.40 (17) |
| C6—C1—C7 | 119.05 (15) | N2—C12—C13 | 117.91 (16) |
| C2—C1—C6 | 119.52 (16) | C8—C13—C12 | 118.76 (16) |
| O1—C2—C3 | 117.94 (15) | C2—C3—H3 | 120.00 |
| C1—C2—C3 | 119.50 (16) | C4—C3—H3 | 120.00 |
| O1—C2—C1 | 122.56 (16) | C3—C4—H4 | 120.00 |
| C2—C3—C4 | 120.43 (16) | C5—C4—H4 | 120.00 |
| C3—C4—C5 | 120.02 (17) | C1—C6—H6 | 120.00 |
| Br1—C5—C4 | 119.11 (13) | C5—C6—H6 | 120.00 |
| Br1—C5—C6 | 119.98 (13) | N1—C7—H7 | 120.00 |
| C4—C5—C6 | 120.88 (16) | C1—C7—H7 | 120.00 |
| C1—C6—C5 | 119.65 (15) | C9—C10—H10 | 121.00 |
| N1—C7—C1 | 120.45 (16) | C11—C10—H10 | 121.00 |
| N1—C8—C9 | 116.27 (16) | C10—C11—H11 | 121.00 |
| N1—C8—C13 | 126.35 (16) | C12—C11—H11 | 121.00 |
| C9—C8—C13 | 117.38 (16) | C8—C13—H13 | 121.00 |
| F1—C9—C8 | 117.83 (16) | C12—C13—H13 | 121.00 |
| C8—N1—C7—C1 | −179.92 (16) | C3—C4—C5—C6 | 0.4 (3) |
| C7—N1—C8—C9 | 179.13 (17) | C3—C4—C5—Br1 | −177.66 (14) |
| C7—N1—C8—C13 | −1.3 (3) | Br1—C5—C6—C1 | 177.55 (13) |
| O3—N2—C12—C13 | −4.7 (3) | C4—C5—C6—C1 | −0.5 (3) |
| O2—N2—C12—C11 | −3.3 (3) | N1—C8—C9—C10 | 179.72 (16) |
| O2—N2—C12—C13 | 175.80 (17) | C13—C8—C9—F1 | −179.08 (16) |
| O3—N2—C12—C11 | 176.20 (19) | C13—C8—C9—C10 | 0.1 (3) |
| C7—C1—C2—C3 | 178.71 (17) | N1—C8—C9—F1 | 0.5 (2) |
| C7—C1—C6—C5 | −178.80 (17) | N1—C8—C13—C12 | −179.49 (17) |
| C2—C1—C7—N1 | 0.1 (3) | C9—C8—C13—C12 | 0.1 (3) |
| C2—C1—C6—C5 | 0.7 (3) | F1—C9—C10—C11 | 178.83 (16) |
| C6—C1—C2—C3 | −0.8 (3) | C8—C9—C10—C11 | −0.4 (3) |
| C7—C1—C2—O1 | −1.2 (3) | C9—C10—C11—C12 | 0.4 (3) |
| C6—C1—C7—N1 | 179.58 (16) | C10—C11—C12—N2 | 178.83 (16) |
| C6—C1—C2—O1 | 179.35 (16) | C10—C11—C12—C13 | −0.3 (3) |
| O1—C2—C3—C4 | −179.43 (16) | N2—C12—C13—C8 | −179.08 (16) |
| C1—C2—C3—C4 | 0.7 (3) | C11—C12—C13—C8 | 0.0 (3) |
| C2—C3—C4—C5 | −0.5 (3) |
| H··· | ||||
| O1—H1···N1 | 0.84 | 1.86 | 2.601 (2) | 146 |
| C7—H7···O3i | 0.95 | 2.45 | 3.399 (3) | 173 |
| C13—H13···O3i | 0.95 | 2.48 | 3.430 (3) | 173 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N1 | 0.84 | 1.86 | 2.601 (2) | 146 |
| C7—H7⋯O3i | 0.95 | 2.45 | 3.399 (3) | 173 |
| C13—H13⋯O3i | 0.95 | 2.48 | 3.430 (3) | 173 |
Symmetry code: (i) .