Literature DB >> 23476329

Bis({1-[(1-imino-eth-yl)imino]-eth-yl}aza-nido-κ(2) N (1),N (5))nickel(II) methanol monosolvate.

Yong-Qiang Xie1, Jun-Jian Li, Ying Guo, You-Ming Zhang, Tai-Bao Wei.   

Abstract

The title compound, [Ni(C4H8N3)2]·CH3OH, contains two independent Ni(II) atoms, each located on an inversion center and coordinated by four N atoms from two 1-[(1-imino-eth-yl)imino]-eth-yl}aza-nide ligands in a square-planar geometry. N-H⋯N, N-H⋯O and O-H⋯N hydrogen bonds link the complex mol-ecules and methanol solvent mol-ecules into a corrugated layer parallel to (001).

Entities:  

Year:  2012        PMID: 23476329      PMCID: PMC3588343          DOI: 10.1107/S1600536812046958

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures and applications of related compounds, see: Aromi et al. (2011 ▶); Guzei et al. (2006 ▶); Kopylovich et al. (2007 ▶); Kryatov et al. (2001 ▶); Norrestam et al. (1983 ▶).

Experimental

Crystal data

[Ni(C4H8N3)2]·CH4O M = 287.02 Monoclinic, a = 9.2768 (7) Å b = 11.4347 (3) Å c = 12.9774 (3) Å β = 92.961 (3)° V = 1374.77 (11) Å3 Z = 4 Mo Kα radiation μ = 1.41 mm−1 T = 298 K 0.23 × 0.21 × 0.19 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.603, T max = 0.766 9293 measured reflections 2421 independent reflections 1738 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.082 S = 1.04 2421 reflections 163 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812046958/hy2604sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046958/hy2604Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C4H8N3)2]·CH4OF(000) = 608
Mr = 287.02Dx = 1.387 Mg m3Dm = 1.37 Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9999 reflections
a = 9.2768 (7) Åθ = 2.4–27.7°
b = 11.4347 (3) ŵ = 1.41 mm1
c = 12.9774 (3) ÅT = 298 K
β = 92.961 (3)°Block, green
V = 1374.77 (11) Å30.23 × 0.21 × 0.19 mm
Z = 4
Bruker APEXII CCD diffractometer2421 independent reflections
Radiation source: fine-focus sealed tube1738 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→11
Tmin = 0.603, Tmax = 0.766k = −13→13
9293 measured reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H-atom parameters constrained
wR(F2) = 0.082w = 1/[σ2(Fo2) + (0.0344P)2 + 0.7499P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2421 reflectionsΔρmax = 0.33 e Å3
163 parametersΔρmin = −0.20 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.051 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8993 (3)0.3445 (2)0.0859 (3)0.0599 (8)
H1A0.92690.33050.15720.090*
H1B0.80740.38320.08100.090*
H1C0.97040.39290.05580.090*
C20.8886 (3)0.2297 (2)0.02917 (19)0.0394 (6)
C30.7796 (3)0.1309 (2)−0.10996 (19)0.0383 (6)
C40.6614 (3)0.1373 (3)−0.1938 (2)0.0578 (8)
H4A0.66470.0688−0.23650.087*
H4B0.67470.2057−0.23510.087*
H4C0.56950.1413−0.16320.087*
N10.9732 (2)0.14471 (17)0.05897 (16)0.0391 (5)
H11.02480.15770.11480.047*
N20.8599 (2)0.03823 (17)−0.10115 (15)0.0379 (5)
H20.8460−0.0129−0.14930.045*
N30.7895 (2)0.22670 (18)−0.05010 (16)0.0423 (5)
Ni11.00000.00000.00000.03187 (16)
C50.4642 (3)0.1559 (2)0.1102 (3)0.0606 (8)
H5A0.38620.11500.07460.091*
H5B0.46850.13440.18180.091*
H5C0.55350.13570.08050.091*
C60.4397 (3)0.2853 (2)0.1004 (2)0.0407 (6)
C70.3098 (3)0.4450 (2)0.1593 (2)0.0402 (6)
C80.2071 (4)0.4860 (2)0.2380 (2)0.0561 (8)
H8A0.25700.49010.30460.084*
H8B0.12820.43190.24070.084*
H8C0.17070.56200.21900.084*
N40.3630 (2)0.52029 (17)0.09697 (17)0.0423 (6)
H40.32960.59020.10140.051*
N50.5126 (2)0.34436 (18)0.03568 (17)0.0406 (5)
H50.57650.30500.00470.049*
N60.3410 (2)0.32978 (18)0.16225 (16)0.0431 (5)
Ni20.50000.50000.00000.03481 (17)
C1A0.1695 (5)0.1778 (3)0.3585 (3)0.0868 (12)
H1A10.26170.15560.38940.130*
H1A20.09620.12680.38260.130*
H1A30.14840.25700.37710.130*
O1A0.1728 (2)0.16916 (17)0.25194 (14)0.0601 (6)
H1A40.22420.22100.23020.090*
U11U22U33U12U13U23
C10.0588 (19)0.0430 (17)0.076 (2)0.0143 (15)−0.0105 (16)−0.0205 (15)
C20.0371 (15)0.0335 (14)0.0476 (15)0.0039 (12)0.0022 (12)−0.0055 (11)
C30.0365 (14)0.0359 (14)0.0422 (14)0.0038 (12)−0.0001 (11)0.0030 (11)
C40.0597 (19)0.0530 (18)0.0582 (18)0.0117 (15)−0.0199 (15)−0.0022 (14)
N10.0408 (12)0.0349 (11)0.0408 (12)0.0056 (10)−0.0048 (10)−0.0067 (9)
N20.0414 (13)0.0322 (11)0.0395 (12)0.0048 (10)−0.0037 (9)−0.0048 (9)
N30.0400 (13)0.0359 (12)0.0502 (13)0.0094 (10)−0.0044 (10)−0.0036 (10)
Ni10.0320 (3)0.0273 (3)0.0360 (3)0.00400 (18)−0.00116 (18)−0.00203 (18)
C50.064 (2)0.0380 (16)0.081 (2)0.0033 (15)0.0155 (17)0.0081 (15)
C60.0399 (15)0.0325 (13)0.0490 (16)−0.0001 (12)−0.0043 (12)0.0039 (12)
C70.0347 (15)0.0402 (15)0.0454 (15)−0.0010 (12)−0.0012 (12)−0.0033 (12)
C80.0558 (18)0.0507 (19)0.063 (2)−0.0025 (14)0.0164 (15)−0.0092 (14)
N40.0429 (13)0.0323 (12)0.0521 (13)0.0071 (10)0.0051 (11)−0.0004 (10)
N50.0389 (13)0.0343 (12)0.0484 (12)0.0081 (10)0.0023 (10)0.0000 (10)
N60.0426 (13)0.0376 (12)0.0493 (13)−0.0005 (10)0.0061 (11)0.0016 (10)
Ni20.0339 (3)0.0292 (3)0.0413 (3)0.00597 (19)0.00096 (19)0.00100 (19)
C1A0.124 (4)0.078 (3)0.058 (2)−0.018 (2)0.006 (2)0.0053 (19)
O1A0.0711 (15)0.0590 (13)0.0505 (12)−0.0232 (11)0.0049 (10)−0.0076 (10)
C1—C21.506 (3)C5—H5C0.9600
C1—H1A0.9600C6—N51.296 (3)
C1—H1B0.9600C6—N61.348 (3)
C1—H1C0.9600C7—N41.297 (3)
C2—N11.295 (3)C7—N61.349 (3)
C2—N31.344 (3)C7—C81.507 (4)
C3—N21.296 (3)C8—H8A0.9600
C3—N31.344 (3)C8—H8B0.9600
C3—C41.506 (3)C8—H8C0.9600
C4—H4A0.9600N4—Ni21.848 (2)
C4—H4B0.9600N4—H40.8600
C4—H4C0.9600N5—Ni21.841 (2)
N1—Ni11.8452 (19)N5—H50.8600
N1—H10.8600Ni2—N5ii1.841 (2)
N2—Ni11.851 (2)Ni2—N4ii1.848 (2)
N2—H20.8600C1A—O1A1.388 (4)
Ni1—N1i1.8452 (19)C1A—H1A10.9600
Ni1—N2i1.851 (2)C1A—H1A20.9600
C5—C61.501 (3)C1A—H1A30.9600
C5—H5A0.9600O1A—H1A40.8200
C5—H5B0.9600
C2—C1—H1A109.5H5A—C5—H5C109.5
C2—C1—H1B109.5H5B—C5—H5C109.5
H1A—C1—H1B109.5N5—C6—N6125.6 (2)
C2—C1—H1C109.5N5—C6—C5119.2 (3)
H1A—C1—H1C109.5N6—C6—C5115.2 (2)
H1B—C1—H1C109.5N4—C7—N6125.3 (3)
N1—C2—N3126.1 (2)N4—C7—C8119.4 (2)
N1—C2—C1119.0 (2)N6—C7—C8115.3 (2)
N3—C2—C1114.9 (2)C7—C8—H8A109.5
N2—C3—N3126.4 (2)C7—C8—H8B109.5
N2—C3—C4119.8 (2)H8A—C8—H8B109.5
N3—C3—C4113.8 (2)C7—C8—H8C109.5
C3—C4—H4A109.5H8A—C8—H8C109.5
C3—C4—H4B109.5H8B—C8—H8C109.5
H4A—C4—H4B109.5C7—N4—Ni2129.69 (19)
C3—C4—H4C109.5C7—N4—H4115.2
H4A—C4—H4C109.5Ni2—N4—H4115.2
H4B—C4—H4C109.5C6—N5—Ni2129.70 (18)
C2—N1—Ni1129.87 (18)C6—N5—H5115.1
C2—N1—H1115.1Ni2—N5—H5115.1
Ni1—N1—H1115.1C6—N6—C7120.2 (2)
C3—N2—Ni1129.38 (18)N5ii—Ni2—N5180.00 (13)
C3—N2—H2115.3N5ii—Ni2—N490.74 (9)
Ni1—N2—H2115.3N5—Ni2—N489.26 (9)
C3—N3—C2119.1 (2)N5ii—Ni2—N4ii89.26 (9)
N1—Ni1—N1i180.00 (13)N5—Ni2—N4ii90.74 (9)
N1—Ni1—N288.73 (9)N4—Ni2—N4ii180.0
N1i—Ni1—N291.27 (9)O1A—C1A—H1A1109.5
N1—Ni1—N2i91.27 (9)O1A—C1A—H1A2109.5
N1i—Ni1—N2i88.73 (9)H1A1—C1A—H1A2109.5
N2—Ni1—N2i180.00 (17)O1A—C1A—H1A3109.5
C6—C5—H5A109.5H1A1—C1A—H1A3109.5
C6—C5—H5B109.5H1A2—C1A—H1A3109.5
H5A—C5—H5B109.5C1A—O1A—H1A4109.5
C6—C5—H5C109.5
N3—C2—N1—Ni16.0 (4)N6—C7—N4—Ni2−3.4 (4)
C1—C2—N1—Ni1−173.5 (2)C8—C7—N4—Ni2174.9 (2)
N3—C3—N2—Ni16.1 (4)N6—C6—N5—Ni2−4.4 (4)
C4—C3—N2—Ni1−173.7 (2)C5—C6—N5—Ni2175.8 (2)
N2—C3—N3—C2−1.7 (4)N5—C6—N6—C70.6 (4)
C4—C3—N3—C2178.2 (2)C5—C6—N6—C7−179.6 (2)
N1—C2—N3—C3−4.4 (4)N4—C7—N6—C63.3 (4)
C1—C2—N3—C3175.1 (2)C8—C7—N6—C6−175.1 (2)
C2—N1—Ni1—N2−1.8 (2)C6—N5—Ni2—N43.5 (2)
C2—N1—Ni1—N2i178.2 (2)C6—N5—Ni2—N4ii−176.5 (2)
C3—N2—Ni1—N1−3.9 (2)C7—N4—Ni2—N5ii−179.8 (2)
C3—N2—Ni1—N1i176.1 (2)C7—N4—Ni2—N50.2 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1Aiii0.862.193.049 (3)172
N2—H2···O1Aiv0.862.233.079 (3)169
N4—H4···N3ii0.862.443.264 (3)160
N5—H5···N30.862.313.153 (3)165
O1A—H1A4···N60.821.902.711 (3)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1A i 0.862.193.049 (3)172
N2—H2⋯O1A ii 0.862.233.079 (3)169
N4—H4⋯N3iii 0.862.443.264 (3)160
N5—H5⋯N30.862.313.153 (3)165
O1A—H1A4⋯N60.821.902.711 (3)172

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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