Literature DB >> 23476301

3-Hy-droxy-2-meth-oxy-benzamide.

Sabine Wilbrand1, Christian Neis, Kaspar Hegetschweiler.   

Abstract

The crystal structure of the title compound, C8H9NO3, features centrosymmetric dimers with two amide groups inter-connected by a pair of almost linear N-H⋯O hydrogen bonds. Through inter-molecular O-H⋯O inter-actions between phenolic hy-droxy groups and carbonyl O atoms, these dimers are assembled into undulating hydrogen-bonded layers parallel to the [101] plane. Additionally, the anti-H(-N) atom of the primary amide group forms an intra-molecular hydrogen bond to the O atom of the meth-oxy group. The amide group froms a dihedral angle of 12.6 (1)° with the phenyl ring.

Entities:  

Year:  2012        PMID: 23476301      PMCID: PMC3589065          DOI: 10.1107/S1600536812047769

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Hydrogen-bonding packing patterns of primary amides are discussed by Eccles et al. (2011 ▶) and McMahon et al. (2005 ▶). A description of the Cambridge Crystallographic Database is given by Allen (2002 ▶). The question of the occurrence of very bent, intra­molecular C—H⋯O hydrogen bonds has been discussed by Desiraju (1996 ▶).

Experimental

Crystal data

C8H9NO3 M = 167.16 Monoclinic, a = 5.6293 (2) Å b = 10.1826 (4) Å c = 13.2402 (5) Å β = 92.750 (1)° V = 758.07 (5) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 110 K 0.49 × 0.18 × 0.14 mm

Data collection

Bruker APEXII KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2010 ▶) T min = 0.947, T max = 0.984 7200 measured reflections 1484 independent reflections 1325 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.083 S = 1.06 1484 reflections 122 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2012 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812047769/ld2083sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047769/ld2083Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812047769/ld2083Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H9NO3F(000) = 352
Mr = 167.16Dx = 1.465 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 5.6293 (2) ÅCell parameters from 3853 reflections
b = 10.1826 (4) Åθ = 2.5–32.5°
c = 13.2402 (5) ŵ = 0.11 mm1
β = 92.750 (1)°T = 110 K
V = 758.07 (5) Å3Prism, colourless
Z = 40.49 × 0.18 × 0.14 mm
Bruker APEXII KappaCCD diffractometer1484 independent reflections
Radiation source: fine-focus sealed tube1325 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
phi and ω scansθmax = 26.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2010)h = −6→6
Tmin = 0.947, Tmax = 0.984k = −12→12
7200 measured reflectionsl = −15→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.083H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0421P)2 + 0.2806P] where P = (Fo2 + 2Fc2)/3
1484 reflections(Δ/σ)max = 0.001
122 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.17410 (14)0.98464 (8)0.80141 (6)0.0160 (2)
O2−0.12850 (15)0.83936 (9)0.91393 (6)0.0192 (2)
H2−0.195 (3)0.7717 (19)0.9432 (13)0.046 (5)*
O30.23900 (15)0.88839 (8)0.49736 (6)0.0194 (2)
N10.35604 (19)1.02761 (11)0.62107 (8)0.0207 (3)
H1A0.474 (3)1.0570 (15)0.5835 (12)0.031 (4)*
H1B0.346 (3)1.0515 (16)0.6851 (13)0.031 (4)*
C10.0386 (2)0.87000 (11)0.65116 (9)0.0149 (3)
C20.03195 (19)0.88969 (11)0.75592 (8)0.0137 (3)
C3−0.1284 (2)0.81706 (11)0.81214 (9)0.0156 (3)
C4−0.2821 (2)0.72817 (12)0.76327 (9)0.0182 (3)
H4−0.38760.67750.80140.022*
C5−0.2824 (2)0.71313 (12)0.65908 (9)0.0203 (3)
H5−0.39180.65460.62580.024*
C6−0.1234 (2)0.78327 (12)0.60378 (9)0.0185 (3)
H6−0.12430.77230.53250.022*
C70.2192 (2)0.93056 (11)0.58521 (9)0.0158 (3)
C80.3210 (2)0.94758 (13)0.88935 (9)0.0213 (3)
H8A0.23920.97000.95070.032*
H8B0.47270.99480.88900.032*
H8C0.35080.85280.88790.032*
U11U22U33U12U13U23
O10.0186 (4)0.0168 (4)0.0125 (4)−0.0020 (3)−0.0006 (3)−0.0004 (3)
O20.0235 (5)0.0217 (5)0.0125 (4)−0.0022 (4)0.0045 (3)0.0010 (3)
O30.0241 (5)0.0209 (5)0.0138 (4)−0.0026 (3)0.0063 (3)−0.0024 (3)
N10.0247 (6)0.0232 (6)0.0150 (5)−0.0082 (4)0.0083 (4)−0.0027 (4)
C10.0167 (6)0.0138 (6)0.0146 (6)0.0017 (4)0.0033 (4)0.0007 (4)
C20.0137 (5)0.0121 (5)0.0152 (6)0.0019 (4)0.0002 (4)−0.0008 (4)
C30.0183 (6)0.0160 (6)0.0126 (5)0.0036 (5)0.0026 (4)0.0010 (4)
C40.0185 (6)0.0172 (6)0.0193 (6)−0.0015 (5)0.0053 (5)0.0025 (5)
C50.0213 (6)0.0185 (6)0.0210 (6)−0.0052 (5)0.0012 (5)−0.0022 (5)
C60.0231 (6)0.0196 (6)0.0128 (6)−0.0014 (5)0.0021 (5)−0.0018 (5)
C70.0180 (6)0.0156 (6)0.0138 (6)0.0018 (4)0.0024 (4)0.0010 (5)
C80.0192 (6)0.0277 (7)0.0165 (6)−0.0008 (5)−0.0035 (5)0.0012 (5)
O1—C21.3753 (14)C2—C31.4074 (16)
O1—C81.4456 (14)C3—C41.3903 (17)
O2—C31.3668 (14)C4—C51.3879 (17)
O2—H20.88 (2)C4—H40.9500
O3—C71.2499 (14)C5—C61.3822 (17)
N1—C71.3267 (16)C5—H50.9500
N1—H1A0.901 (17)C6—H60.9500
N1—H1B0.887 (17)C8—H8A0.9800
C1—C61.3963 (17)C8—H8B0.9800
C1—C21.4038 (16)C8—H8C0.9800
C1—C71.5041 (16)
C2—O1—C8117.88 (9)C3—C4—H4119.8
C3—O2—H2108.9 (12)C6—C5—C4119.98 (11)
C7—N1—H1A118.7 (10)C6—C5—H5120.0
C7—N1—H1B118.8 (10)C4—C5—H5120.0
H1A—N1—H1B121.5 (14)C5—C6—C1120.95 (11)
C6—C1—C2119.12 (10)C5—C6—H6119.5
C6—C1—C7116.33 (10)C1—C6—H6119.5
C2—C1—C7124.46 (11)O3—C7—N1120.85 (11)
O1—C2—C1119.38 (10)O3—C7—C1119.49 (10)
O1—C2—C3120.82 (10)N1—C7—C1119.65 (10)
C1—C2—C3119.71 (11)O1—C8—H8A109.5
O2—C3—C4122.52 (11)O1—C8—H8B109.5
O2—C3—C2117.69 (10)H8A—C8—H8B109.5
C4—C3—C2119.78 (11)O1—C8—H8C109.5
C5—C4—C3120.36 (11)H8A—C8—H8C109.5
C5—C4—H4119.8H8B—C8—H8C109.5
C8—O1—C2—C1−129.31 (11)O2—C3—C4—C5177.18 (11)
C8—O1—C2—C354.02 (14)C2—C3—C4—C5−1.63 (18)
C6—C1—C2—O1−173.41 (10)C3—C4—C5—C62.32 (19)
C7—C1—C2—O110.24 (17)C4—C5—C6—C1−0.16 (19)
C6—C1—C2—C33.30 (17)C2—C1—C6—C5−2.65 (18)
C7—C1—C2—C3−173.05 (10)C7—C1—C6—C5173.99 (11)
O1—C2—C3—O2−3.41 (16)C6—C1—C7—O3−9.95 (17)
C1—C2—C3—O2179.93 (10)C2—C1—C7—O3166.50 (11)
O1—C2—C3—C4175.47 (10)C6—C1—C7—N1170.31 (11)
C1—C2—C3—C4−1.20 (17)C2—C1—C7—N1−13.25 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O3i0.901 (17)2.056 (17)2.9547 (13)175.3 (14)
N1—H1B···O10.887 (17)1.977 (17)2.6789 (13)135.0 (14)
O2—H2···O3ii0.88 (2)1.83 (2)2.6895 (12)165.5 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O3i 0.901 (17)2.056 (17)2.9547 (13)175.3 (14)
N1—H1B⋯O10.887 (17)1.977 (17)2.6789 (13)135.0 (14)
O2—H2⋯O3ii 0.88 (2)1.83 (2)2.6895 (12)165.5 (17)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  The C-h···o hydrogen bond:  structural implications and supramolecular design.

Authors:  G R Desiraju
Journal:  Acc Chem Res       Date:  1996-09       Impact factor: 22.384

  3 in total
  1 in total

1.  Crystal structure of 2-pentyl-oxybenzamide.

Authors:  Bernhard Bugenhagen; Yosef Al Jasem; Thies Thiemann
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-09-20
  1 in total

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