| Literature DB >> 23476290 |
U Chaithanya1, Sabine Foro, B Thimme Gowda.
Abstract
In the title compound, C12H8Cl2N2O4S, the C-S-N-C torsion angle is 49.34 (18)° and the dihedral angle between the benzene rings is 71.92 (10)°. The amide H atom exhibits bifurcated hydrogen bonding. The N-H bond is syn to the ortho-nitro group enabling the formation of an S(7) loop. In the crystal, pairs of N-H⋯O(S) hydrogen bonds link the mol-ecules into inversion dimers via R2(2)(8) rings.Entities:
Year: 2012 PMID: 23476290 PMCID: PMC3589054 DOI: 10.1107/S1600536812048283
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H8Cl2N2O4S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3256 reflections | |
| θ = 3.1–27.7° | |
| µ = 0.61 mm−1 | |
| α = 76.730 (8)° | |
| β = 89.298 (9)° | Prism, colourless |
| γ = 86.875 (9)° | 0.44 × 0.40 × 0.28 mm |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 2925 independent reflections |
| Radiation source: fine-focus sealed tube | 2600 reflections with |
| Graphite monochromator | |
| Rotation method data acquisition using ω scans | θmax = 26.4°, θmin = 3.2° |
| Absorption correction: multi-scan ( | |
| 4766 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2925 reflections | Δρmax = 0.44 e Å−3 |
| 194 parameters | Δρmin = −0.49 e Å−3 |
| 1 restraint | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.100 (5) |
| Experimental. Absorption correction: CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3367 (2) | 0.2350 (2) | 0.37443 (17) | 0.0340 (4) | |
| C2 | 0.2649 (2) | 0.3607 (2) | 0.42524 (17) | 0.0371 (4) | |
| C3 | 0.3229 (3) | 0.5157 (2) | 0.4011 (2) | 0.0459 (5) | |
| H3 | 0.2729 | 0.5973 | 0.4369 | 0.055* | |
| C4 | 0.4565 (3) | 0.5488 (3) | 0.3228 (2) | 0.0492 (5) | |
| H4 | 0.4964 | 0.6537 | 0.3046 | 0.059* | |
| C5 | 0.5305 (2) | 0.4268 (3) | 0.2718 (2) | 0.0498 (5) | |
| H5 | 0.6207 | 0.4496 | 0.2192 | 0.060* | |
| C6 | 0.4721 (2) | 0.2700 (2) | 0.29780 (19) | 0.0419 (4) | |
| H6 | 0.5241 | 0.1880 | 0.2636 | 0.050* | |
| C7 | 0.0975 (2) | 0.1026 (2) | 0.19048 (18) | 0.0380 (4) | |
| C8 | 0.2129 (2) | 0.0663 (3) | 0.1044 (2) | 0.0448 (4) | |
| H8 | 0.3031 | −0.0032 | 0.1331 | 0.054* | |
| C9 | 0.1901 (3) | 0.1361 (3) | −0.0251 (2) | 0.0495 (5) | |
| C10 | 0.0575 (3) | 0.2374 (3) | −0.0718 (2) | 0.0560 (6) | |
| H10 | 0.0443 | 0.2824 | −0.1594 | 0.067* | |
| C11 | −0.0553 (3) | 0.2695 (3) | 0.0166 (2) | 0.0549 (5) | |
| C12 | −0.0370 (2) | 0.2058 (3) | 0.14680 (19) | 0.0472 (5) | |
| H12 | −0.1136 | 0.2315 | 0.2046 | 0.057* | |
| N1 | 0.10830 (19) | 0.0311 (2) | 0.32445 (15) | 0.0403 (4) | |
| H1N | 0.024 (2) | 0.045 (3) | 0.367 (2) | 0.048* | |
| N2 | 0.1200 (2) | 0.3345 (2) | 0.50690 (17) | 0.0481 (4) | |
| O1 | 0.39505 (17) | −0.06691 (17) | 0.36502 (15) | 0.0478 (3) | |
| O2 | 0.21976 (16) | −0.01250 (17) | 0.54098 (13) | 0.0438 (3) | |
| O3 | 0.00227 (19) | 0.2822 (2) | 0.4655 (2) | 0.0675 (5) | |
| O4 | 0.1245 (3) | 0.3732 (2) | 0.60935 (17) | 0.0764 (6) | |
| Cl1 | 0.33194 (8) | 0.08990 (10) | −0.13460 (6) | 0.0734 (2) | |
| Cl2 | −0.22590 (10) | 0.39424 (13) | −0.03893 (7) | 0.0972 (3) | |
| S1 | 0.27077 (5) | 0.03037 (5) | 0.40942 (4) | 0.03530 (15) |
| C1 | 0.0303 (8) | 0.0350 (9) | 0.0351 (9) | −0.0007 (7) | 0.0013 (7) | −0.0052 (7) |
| C2 | 0.0361 (9) | 0.0384 (9) | 0.0349 (9) | 0.0005 (7) | 0.0055 (7) | −0.0054 (7) |
| C3 | 0.0510 (11) | 0.0397 (10) | 0.0480 (11) | −0.0017 (8) | 0.0055 (9) | −0.0121 (8) |
| C4 | 0.0502 (11) | 0.0416 (10) | 0.0550 (12) | −0.0117 (9) | 0.0049 (9) | −0.0074 (9) |
| C5 | 0.0388 (10) | 0.0546 (12) | 0.0541 (12) | −0.0114 (9) | 0.0127 (9) | −0.0074 (10) |
| C6 | 0.0343 (9) | 0.0461 (11) | 0.0452 (10) | −0.0008 (8) | 0.0080 (8) | −0.0113 (8) |
| C7 | 0.0370 (9) | 0.0437 (10) | 0.0349 (9) | −0.0102 (8) | 0.0032 (7) | −0.0104 (8) |
| C8 | 0.0386 (10) | 0.0517 (11) | 0.0449 (11) | −0.0060 (8) | 0.0070 (8) | −0.0123 (9) |
| C9 | 0.0472 (11) | 0.0633 (13) | 0.0411 (11) | −0.0130 (10) | 0.0143 (9) | −0.0171 (10) |
| C10 | 0.0607 (13) | 0.0719 (15) | 0.0347 (10) | −0.0075 (11) | 0.0036 (9) | −0.0101 (10) |
| C11 | 0.0515 (12) | 0.0702 (15) | 0.0413 (11) | 0.0051 (11) | −0.0041 (9) | −0.0105 (10) |
| C12 | 0.0415 (10) | 0.0637 (13) | 0.0375 (10) | 0.0027 (9) | 0.0026 (8) | −0.0152 (9) |
| N1 | 0.0330 (8) | 0.0512 (9) | 0.0356 (8) | −0.0068 (7) | 0.0055 (6) | −0.0070 (7) |
| N2 | 0.0528 (10) | 0.0374 (9) | 0.0497 (10) | 0.0056 (7) | 0.0200 (8) | −0.0040 (7) |
| O1 | 0.0430 (7) | 0.0395 (7) | 0.0611 (9) | 0.0055 (6) | 0.0042 (6) | −0.0141 (6) |
| O2 | 0.0438 (7) | 0.0464 (8) | 0.0363 (7) | −0.0034 (6) | 0.0012 (6) | 0.0008 (6) |
| O3 | 0.0427 (8) | 0.0656 (11) | 0.0972 (14) | −0.0082 (8) | 0.0266 (9) | −0.0246 (10) |
| O4 | 0.0956 (14) | 0.0836 (13) | 0.0489 (10) | 0.0012 (11) | 0.0302 (9) | −0.0156 (9) |
| Cl1 | 0.0674 (4) | 0.0992 (5) | 0.0540 (4) | −0.0063 (3) | 0.0297 (3) | −0.0193 (3) |
| Cl2 | 0.0839 (5) | 0.1405 (8) | 0.0550 (4) | 0.0480 (5) | −0.0145 (3) | −0.0092 (4) |
| S1 | 0.0331 (2) | 0.0330 (2) | 0.0379 (3) | 0.00006 (16) | 0.00272 (17) | −0.00480 (17) |
| C1—C6 | 1.384 (2) | C8—C9 | 1.382 (3) |
| C1—C2 | 1.390 (3) | C8—H8 | 0.9300 |
| C1—S1 | 1.7763 (18) | C9—C10 | 1.374 (3) |
| C2—C3 | 1.372 (3) | C9—Cl1 | 1.737 (2) |
| C2—N2 | 1.470 (2) | C10—C11 | 1.378 (3) |
| C3—C4 | 1.379 (3) | C10—H10 | 0.9300 |
| C3—H3 | 0.9300 | C11—C12 | 1.376 (3) |
| C4—C5 | 1.374 (3) | C11—Cl2 | 1.735 (2) |
| C4—H4 | 0.9300 | C12—H12 | 0.9300 |
| C5—C6 | 1.386 (3) | N1—S1 | 1.6308 (16) |
| C5—H5 | 0.9300 | N1—H1N | 0.848 (16) |
| C6—H6 | 0.9300 | N2—O4 | 1.210 (2) |
| C7—C8 | 1.387 (3) | N2—O3 | 1.217 (3) |
| C7—C12 | 1.387 (3) | O1—S1 | 1.4200 (14) |
| C7—N1 | 1.419 (2) | O2—S1 | 1.4312 (14) |
| C6—C1—C2 | 117.76 (17) | C10—C9—C8 | 122.82 (19) |
| C6—C1—S1 | 118.50 (14) | C10—C9—Cl1 | 118.30 (17) |
| C2—C1—S1 | 123.64 (13) | C8—C9—Cl1 | 118.86 (18) |
| C3—C2—C1 | 122.36 (17) | C9—C10—C11 | 117.3 (2) |
| C3—C2—N2 | 116.28 (17) | C9—C10—H10 | 121.3 |
| C1—C2—N2 | 121.35 (16) | C11—C10—H10 | 121.3 |
| C2—C3—C4 | 118.96 (19) | C12—C11—C10 | 122.3 (2) |
| C2—C3—H3 | 120.5 | C12—C11—Cl2 | 119.11 (18) |
| C4—C3—H3 | 120.5 | C10—C11—Cl2 | 118.64 (18) |
| C5—C4—C3 | 119.99 (19) | C11—C12—C7 | 118.90 (19) |
| C5—C4—H4 | 120.0 | C11—C12—H12 | 120.6 |
| C3—C4—H4 | 120.0 | C7—C12—H12 | 120.6 |
| C4—C5—C6 | 120.64 (18) | C7—N1—S1 | 123.42 (13) |
| C4—C5—H5 | 119.7 | C7—N1—H1N | 114.9 (16) |
| C6—C5—H5 | 119.7 | S1—N1—H1N | 111.2 (16) |
| C1—C6—C5 | 120.27 (18) | O4—N2—O3 | 124.45 (19) |
| C1—C6—H6 | 119.9 | O4—N2—C2 | 117.1 (2) |
| C5—C6—H6 | 119.9 | O3—N2—C2 | 118.40 (18) |
| C8—C7—C12 | 120.52 (18) | O1—S1—O2 | 119.91 (9) |
| C8—C7—N1 | 121.79 (18) | O1—S1—N1 | 108.52 (9) |
| C12—C7—N1 | 117.63 (17) | O2—S1—N1 | 105.46 (8) |
| C9—C8—C7 | 118.2 (2) | O1—S1—C1 | 106.10 (8) |
| C9—C8—H8 | 120.9 | O2—S1—C1 | 108.89 (8) |
| C7—C8—H8 | 120.9 | N1—S1—C1 | 107.41 (8) |
| C6—C1—C2—C3 | 0.5 (3) | C10—C11—C12—C7 | −1.5 (4) |
| S1—C1—C2—C3 | 177.01 (15) | Cl2—C11—C12—C7 | 178.31 (17) |
| C6—C1—C2—N2 | 179.58 (17) | C8—C7—C12—C11 | 1.0 (3) |
| S1—C1—C2—N2 | −3.9 (3) | N1—C7—C12—C11 | −176.4 (2) |
| C1—C2—C3—C4 | 0.5 (3) | C8—C7—N1—S1 | 50.4 (2) |
| N2—C2—C3—C4 | −178.64 (19) | C12—C7—N1—S1 | −132.29 (17) |
| C2—C3—C4—C5 | −0.8 (3) | C3—C2—N2—O4 | −52.3 (3) |
| C3—C4—C5—C6 | 0.2 (3) | C1—C2—N2—O4 | 128.6 (2) |
| C2—C1—C6—C5 | −1.2 (3) | C3—C2—N2—O3 | 124.8 (2) |
| S1—C1—C6—C5 | −177.86 (16) | C1—C2—N2—O3 | −54.3 (3) |
| C4—C5—C6—C1 | 0.9 (3) | C7—N1—S1—O1 | −64.96 (18) |
| C12—C7—C8—C9 | 0.2 (3) | C7—N1—S1—O2 | 165.37 (15) |
| N1—C7—C8—C9 | 177.49 (18) | C7—N1—S1—C1 | 49.34 (18) |
| C7—C8—C9—C10 | −1.0 (3) | C6—C1—S1—O1 | 9.79 (17) |
| C7—C8—C9—Cl1 | −179.14 (15) | C2—C1—S1—O1 | −166.71 (16) |
| C8—C9—C10—C11 | 0.5 (4) | C6—C1—S1—O2 | 140.13 (15) |
| Cl1—C9—C10—C11 | 178.63 (18) | C2—C1—S1—O2 | −36.37 (18) |
| C9—C10—C11—C12 | 0.8 (4) | C6—C1—S1—N1 | −106.13 (16) |
| C9—C10—C11—Cl2 | −179.01 (19) | C2—C1—S1—N1 | 77.38 (17) |
| H··· | ||||
| N1—H1 | 0.85 (2) | 2.23 (2) | 3.052 (2) | 162 (2) |
| N1—H1 | 0.85 (2) | 2.44 (2) | 2.940 (2) | 118 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.85 (2) | 2.23 (2) | 3.052 (2) | 162 (2) |
| N1—H1 | 0.85 (2) | 2.44 (2) | 2.940 (2) | 118 (2) |
Symmetry code: (i) .