| Literature DB >> 23476272 |
François Eya'ane Meva1, Dieter Schaarschmidt, Mohammad A Abdulmalic, Tobias Rüffer.
Abstract
The title compound, C12H8N2O2, was prepared by the reaction of the diethyl ester of naphthalene-bis-(oxamate) with tert-BuNH2. The mol-ecule is nearly planar, with an r.m.s. deviation of 0.017 Å from the plane through all 16 non-H atoms. In the crystal, a three-dimensional network is formed, composed of layers of mol-ecules along the b- and c-axis directions, due to the formation of inter-molecular N-H⋯O hydrogen bonds, as well as of chains along the a-axis direction due to parallel displaced sandwich-type π-π inter-actions with average distances between the inter-acting mol-ecules in the range 3.35-3.40 Å.Entities:
Year: 2012 PMID: 23476272 PMCID: PMC3589036 DOI: 10.1107/S1600536812047526
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H8N2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5135 reflections |
| θ = 2.9–25.9° | |
| µ = 0.11 mm−1 | |
| β = 99.792 (14)° | Block, yellow |
| 0.3 × 0.2 × 0.1 mm | |
| Oxford Gemini S diffractometer | 875 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 26.0°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5294 measured reflections | 2 standard reflections every 50 reflections |
| 1773 independent reflections | intensity decay: none |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1773 reflections | (Δ/σ)max = 0.001 |
| 153 parameters | Δρmax = 0.77 e Å−3 |
| 0 restraints | Δρmin = −0.57 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2609 (4) | −0.2869 (4) | 1.1809 (2) | 0.0276 (8) | |
| C2 | 0.1631 (4) | −0.3842 (4) | 1.1026 (2) | 0.0276 (8) | |
| C3 | 0.2764 (4) | −0.0662 (4) | 1.07897 (19) | 0.0257 (8) | |
| C4 | 0.1859 (4) | −0.1580 (3) | 1.0060 (2) | 0.0247 (8) | |
| C5 | 0.3312 (4) | 0.0874 (4) | 1.06546 (19) | 0.0246 (8) | |
| H5 | 0.3908 | 0.1472 | 1.1134 | 0.030* | |
| C6 | 0.1489 (4) | −0.0948 (4) | 0.92275 (19) | 0.0245 (8) | |
| H6 | 0.0876 | −0.1557 | 0.8757 | 0.029* | |
| C7 | 0.2984 (4) | 0.1545 (4) | 0.9806 (2) | 0.0253 (8) | |
| C8 | 0.2032 (4) | 0.0626 (4) | 0.9075 (2) | 0.0262 (8) | |
| C9 | 0.3508 (4) | 0.3129 (4) | 0.9647 (2) | 0.0272 (8) | |
| H9 | 0.4124 | 0.3738 | 1.0116 | 0.033* | |
| C10 | 0.1628 (4) | 0.1342 (4) | 0.8220 (2) | 0.0284 (8) | |
| H10 | 0.0984 | 0.0763 | 0.7743 | 0.034* | |
| C11 | 0.3125 (5) | 0.3775 (4) | 0.8816 (2) | 0.0327 (8) | |
| H11 | 0.3488 | 0.4815 | 0.8726 | 0.039* | |
| C12 | 0.2174 (5) | 0.2868 (4) | 0.8089 (2) | 0.0327 (9) | |
| H12 | 0.1924 | 0.3313 | 0.7525 | 0.039* | |
| N1 | 0.3053 (4) | −0.1348 (3) | 1.16349 (17) | 0.0273 (7) | |
| N2 | 0.1300 (4) | −0.3136 (3) | 1.02231 (17) | 0.0260 (7) | |
| O1 | 0.2918 (3) | −0.3464 (3) | 1.25533 (14) | 0.0361 (7) | |
| O2 | 0.1113 (3) | −0.5216 (3) | 1.11523 (14) | 0.0344 (7) | |
| H1N | 0.354 (5) | −0.073 (5) | 1.211 (2) | 0.043 (10)* | |
| H2N | 0.053 (6) | −0.366 (5) | 0.975 (3) | 0.059 (12)* |
| C1 | 0.0346 (19) | 0.0156 (17) | 0.0319 (17) | 0.0018 (13) | 0.0036 (13) | −0.0041 (13) |
| C2 | 0.0318 (18) | 0.0181 (17) | 0.0319 (16) | 0.0028 (13) | 0.0028 (13) | 0.0005 (13) |
| C3 | 0.0279 (18) | 0.0199 (18) | 0.0290 (16) | 0.0010 (12) | 0.0041 (12) | −0.0026 (13) |
| C4 | 0.0258 (18) | 0.0128 (16) | 0.0358 (17) | 0.0013 (12) | 0.0055 (13) | −0.0030 (12) |
| C5 | 0.0273 (17) | 0.0139 (16) | 0.0316 (16) | 0.0028 (12) | 0.0023 (12) | −0.0012 (12) |
| C6 | 0.0265 (17) | 0.0172 (17) | 0.0289 (15) | 0.0001 (12) | 0.0019 (12) | −0.0036 (12) |
| C7 | 0.0279 (18) | 0.0137 (17) | 0.0345 (16) | 0.0027 (12) | 0.0056 (13) | −0.0020 (13) |
| C8 | 0.0307 (18) | 0.0146 (17) | 0.0347 (17) | 0.0018 (12) | 0.0099 (13) | 0.0023 (13) |
| C9 | 0.0272 (18) | 0.0195 (18) | 0.0347 (17) | −0.0006 (13) | 0.0044 (13) | −0.0005 (13) |
| C10 | 0.0333 (19) | 0.0197 (18) | 0.0322 (16) | −0.0007 (13) | 0.0052 (13) | −0.0029 (13) |
| C11 | 0.042 (2) | 0.0199 (18) | 0.0370 (18) | −0.0007 (14) | 0.0081 (14) | 0.0021 (13) |
| C12 | 0.044 (2) | 0.0243 (19) | 0.0300 (16) | 0.0043 (14) | 0.0064 (14) | 0.0065 (13) |
| N1 | 0.0394 (17) | 0.0154 (15) | 0.0257 (14) | −0.0026 (11) | 0.0013 (11) | −0.0027 (10) |
| N2 | 0.0342 (16) | 0.0130 (14) | 0.0297 (14) | −0.0001 (10) | 0.0021 (11) | −0.0018 (10) |
| O1 | 0.0532 (16) | 0.0191 (14) | 0.0330 (13) | −0.0021 (10) | −0.0007 (10) | 0.0033 (9) |
| O2 | 0.0459 (15) | 0.0148 (13) | 0.0400 (14) | −0.0017 (9) | 0.0005 (10) | 0.0008 (9) |
| C1—O1 | 1.230 (4) | C6—H6 | 0.9300 |
| C1—N1 | 1.356 (4) | C7—C9 | 1.417 (4) |
| C1—C2 | 1.518 (4) | C7—C8 | 1.432 (4) |
| C2—O2 | 1.240 (4) | C8—C10 | 1.425 (4) |
| C2—N2 | 1.349 (4) | C9—C11 | 1.366 (4) |
| C3—C5 | 1.378 (4) | C9—H9 | 0.9300 |
| C3—N1 | 1.399 (4) | C10—C12 | 1.367 (4) |
| C3—C4 | 1.420 (4) | C10—H10 | 0.9300 |
| C4—C6 | 1.364 (4) | C11—C12 | 1.423 (5) |
| C4—N2 | 1.404 (4) | C11—H11 | 0.9300 |
| C5—C7 | 1.398 (4) | C12—H12 | 0.9300 |
| C5—H5 | 0.9300 | N1—H1N | 0.91 (4) |
| C6—C8 | 1.412 (4) | N2—H2N | 0.94 (4) |
| O1—C1—N1 | 123.8 (3) | C6—C8—C10 | 122.0 (3) |
| O1—C1—C2 | 119.7 (3) | C6—C8—C7 | 119.1 (3) |
| N1—C1—C2 | 116.5 (3) | C10—C8—C7 | 118.9 (3) |
| O2—C2—N2 | 122.8 (3) | C11—C9—C7 | 121.2 (3) |
| O2—C2—C1 | 119.4 (3) | C11—C9—H9 | 119.4 |
| N2—C2—C1 | 117.7 (3) | C7—C9—H9 | 119.4 |
| C5—C3—N1 | 121.7 (3) | C12—C10—C8 | 120.9 (3) |
| C5—C3—C4 | 119.8 (3) | C12—C10—H10 | 119.6 |
| N1—C3—C4 | 118.5 (3) | C8—C10—H10 | 119.6 |
| C6—C4—N2 | 121.0 (3) | C9—C11—C12 | 120.4 (3) |
| C6—C4—C3 | 120.7 (3) | C9—C11—H11 | 119.8 |
| N2—C4—C3 | 118.3 (3) | C12—C11—H11 | 119.8 |
| C3—C5—C7 | 120.8 (3) | C10—C12—C11 | 120.1 (3) |
| C3—C5—H5 | 119.6 | C10—C12—H12 | 120.0 |
| C7—C5—H5 | 119.6 | C11—C12—H12 | 120.0 |
| C4—C6—C8 | 120.4 (3) | C1—N1—C3 | 124.6 (3) |
| C4—C6—H6 | 119.8 | C1—N1—H1N | 117 (2) |
| C8—C6—H6 | 119.8 | C3—N1—H1N | 118 (2) |
| C5—C7—C9 | 122.2 (3) | C2—N2—C4 | 124.2 (3) |
| C5—C7—C8 | 119.2 (3) | C2—N2—H2N | 119 (3) |
| C9—C7—C8 | 118.6 (3) | C4—N2—H2N | 117 (3) |
| O1—C1—C2—O2 | 1.7 (5) | C5—C7—C8—C10 | 177.3 (3) |
| N1—C1—C2—O2 | −176.8 (3) | C9—C7—C8—C10 | −0.8 (4) |
| O1—C1—C2—N2 | 179.3 (3) | C5—C7—C9—C11 | −178.1 (3) |
| N1—C1—C2—N2 | 0.8 (4) | C8—C7—C9—C11 | −0.1 (5) |
| C5—C3—C4—C6 | −1.3 (5) | C6—C8—C10—C12 | −179.8 (3) |
| N1—C3—C4—C6 | 177.9 (3) | C7—C8—C10—C12 | 1.5 (5) |
| C5—C3—C4—N2 | −179.3 (3) | C7—C9—C11—C12 | 0.4 (5) |
| N1—C3—C4—N2 | −0.1 (4) | C8—C10—C12—C11 | −1.3 (5) |
| N1—C3—C5—C7 | −179.0 (3) | C9—C11—C12—C10 | 0.4 (5) |
| C4—C3—C5—C7 | 0.2 (5) | O1—C1—N1—C3 | 178.1 (3) |
| N2—C4—C6—C8 | 179.0 (2) | C2—C1—N1—C3 | −3.5 (4) |
| C3—C4—C6—C8 | 1.1 (5) | C5—C3—N1—C1 | −177.6 (3) |
| C3—C5—C7—C9 | 179.2 (3) | C4—C3—N1—C1 | 3.2 (5) |
| C3—C5—C7—C8 | 1.2 (5) | O2—C2—N2—C4 | 179.7 (3) |
| C4—C6—C8—C10 | −178.4 (3) | C1—C2—N2—C4 | 2.2 (4) |
| C4—C6—C8—C7 | 0.3 (5) | C6—C4—N2—C2 | 179.5 (3) |
| C5—C7—C8—C6 | −1.4 (4) | C3—C4—N2—C2 | −2.6 (5) |
| C9—C7—C8—C6 | −179.5 (3) |
| H··· | ||||
| N1—H1 | 0.91 (4) | 2.27 (4) | 2.866 (3) | 122 (3) |
| N2—H2 | 0.94 (4) | 1.90 (4) | 2.843 (4) | 176 (4) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.91 (4) | 2.27 (4) | 2.866 (3) | 122 (3) |
| N2—H2 | 0.94 (4) | 1.90 (4) | 2.843 (4) | 176 (4) |
Symmetry codes: (i) ; (ii) .