Literature DB >> 23476265

N (1)-(4-Methyl-phen-yl)piperidine-1,4-dicarboxamide.

Arun M Islor1, M R Jagadeesh, H M Suresh Kumar, R Ananda Kumari, Thomas Gerber, Eric Hosten, Richard Betz.   

Abstract

In the title compound, C14H19N3O2, the heterocycle adopts a (1)C4 conformation with the N atom being one of the flap atoms. In the crystal, classical N-H⋯O hydrogen bonds and C-H⋯O contacts connect the mol-ecules into a three-dimensional network.

Entities:  

Year:  2012        PMID: 23476265      PMCID: PMC3589029          DOI: 10.1107/S1600536812047836

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological importance of piperidine and its derivatives, see: Chen et al. (2012 ▶); Boja et al. (2011 ▶); Jakubowska et al. (2012 ▶). For puckering analysis of six-membered rings, see: Cremer & Pople (1975 ▶); Boeyens (1978 ▶). For graph-set analysis of hydrogen bonds, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H19N3O2 M = 261.32 Monoclinic, a = 5.0102 (1) Å b = 28.6642 (7) Å c = 10.1131 (2) Å β = 103.113 (1)° V = 1414.50 (5) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 200 K 0.42 × 0.25 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.966, T max = 0.991 27256 measured reflections 3556 independent reflections 3014 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.124 S = 1.06 3556 reflections 185 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812047836/bg2489sup1.cif Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812047836/bg2489Isup2.cdx Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047836/bg2489Isup3.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812047836/bg2489Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H19N3O2F(000) = 560
Mr = 261.32Dx = 1.227 Mg m3
Monoclinic, P21/cMelting point = 523–521 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 5.0102 (1) ÅCell parameters from 9992 reflections
b = 28.6642 (7) Åθ = 2.2–28.3°
c = 10.1131 (2) ŵ = 0.08 mm1
β = 103.113 (1)°T = 200 K
V = 1414.50 (5) Å3Platelet, colourless
Z = 40.42 × 0.25 × 0.11 mm
Bruker APEXII CCD diffractometer3556 independent reflections
Radiation source: fine-focus sealed tube3014 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
φ and ω scansθmax = 28.4°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −6→6
Tmin = 0.966, Tmax = 0.991k = −38→38
27256 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0614P)2 + 0.3543P] where P = (Fo2 + 2Fc2)/3
3556 reflections(Δ/σ)max < 0.001
185 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.19 e Å3
xyzUiso*/Ueq
O10.1615 (2)0.25725 (3)0.13744 (9)0.0434 (2)
O20.31030 (17)0.05523 (3)0.44661 (12)0.0459 (3)
N10.1515 (2)0.27199 (3)0.35689 (10)0.0330 (2)
H10.155 (3)0.2596 (5)0.4318 (17)0.042 (4)*
N20.3917 (3)0.20893 (4)0.30192 (10)0.0394 (3)
N30.7377 (2)0.03696 (4)0.43233 (13)0.0386 (3)
H3A0.710 (3)0.0081 (6)0.4578 (17)0.049 (4)*
H3B0.898 (3)0.0466 (6)0.4190 (16)0.045 (4)*
C1−0.2229 (5)0.46134 (6)0.3273 (2)0.0767 (6)
H1A−0.07930.48180.30820.115*
H1B−0.26130.46980.41500.115*
H1C−0.38980.46490.25560.115*
C20.2337 (3)0.24678 (4)0.25859 (11)0.0310 (2)
C30.5469 (3)0.20076 (4)0.44066 (12)0.0368 (3)
H3C0.48670.22290.50310.044*
H3D0.74440.20600.44610.044*
C40.5025 (2)0.15119 (4)0.48297 (12)0.0321 (2)
H4A0.30700.14670.48390.039*
H4B0.61290.14560.57600.039*
C50.5848 (2)0.11644 (4)0.38535 (12)0.0301 (2)
H50.78510.12020.38990.036*
C60.4276 (3)0.12705 (4)0.24063 (13)0.0409 (3)
H6A0.49110.10600.17650.049*
H6B0.22970.12130.23270.049*
C70.4714 (4)0.17763 (4)0.20382 (14)0.0472 (4)
H7A0.66660.18270.20340.057*
H7B0.36040.18450.11170.057*
C80.5337 (2)0.06691 (4)0.42456 (12)0.0305 (2)
C110.0476 (2)0.31796 (4)0.34039 (11)0.0302 (2)
C12−0.1339 (3)0.33220 (5)0.41605 (15)0.0455 (3)
H12−0.20110.31040.47130.055*
C13−0.2187 (4)0.37835 (6)0.41185 (17)0.0544 (4)
H13−0.34290.38770.46530.065*
C14−0.1276 (3)0.41117 (5)0.33202 (15)0.0482 (3)
C150.0491 (3)0.39607 (5)0.25471 (15)0.0452 (3)
H150.11150.41770.19720.054*
C160.1383 (3)0.35025 (4)0.25839 (13)0.0383 (3)
H160.26180.34090.20460.046*
U11U22U33U12U13U23
O10.0715 (7)0.0391 (5)0.0191 (4)0.0123 (4)0.0091 (4)0.0027 (3)
O20.0244 (4)0.0361 (5)0.0818 (7)0.0014 (3)0.0219 (4)0.0156 (4)
N10.0484 (6)0.0318 (5)0.0201 (5)0.0058 (4)0.0106 (4)0.0038 (4)
N20.0650 (7)0.0307 (5)0.0221 (5)0.0115 (5)0.0094 (5)0.0012 (4)
N30.0236 (5)0.0294 (5)0.0654 (8)0.0017 (4)0.0159 (5)0.0104 (5)
C10.1017 (15)0.0434 (9)0.0764 (13)0.0245 (9)0.0024 (11)−0.0068 (8)
C20.0435 (6)0.0291 (5)0.0209 (5)−0.0002 (4)0.0083 (4)0.0012 (4)
C30.0458 (7)0.0307 (6)0.0301 (6)0.0028 (5)0.0011 (5)0.0018 (4)
C40.0347 (6)0.0338 (6)0.0265 (6)0.0043 (4)0.0042 (4)0.0054 (4)
C50.0241 (5)0.0282 (5)0.0410 (6)0.0009 (4)0.0135 (4)0.0063 (4)
C60.0620 (8)0.0311 (6)0.0324 (6)0.0079 (5)0.0162 (6)−0.0017 (5)
C70.0824 (10)0.0338 (6)0.0312 (6)0.0140 (6)0.0253 (7)0.0051 (5)
C80.0223 (5)0.0293 (5)0.0412 (6)−0.0004 (4)0.0096 (4)0.0059 (4)
C110.0347 (5)0.0326 (5)0.0219 (5)0.0022 (4)0.0033 (4)−0.0010 (4)
C120.0540 (8)0.0451 (7)0.0429 (7)0.0076 (6)0.0224 (6)0.0027 (6)
C130.0629 (9)0.0538 (9)0.0502 (9)0.0195 (7)0.0205 (7)−0.0047 (7)
C140.0566 (8)0.0371 (7)0.0438 (8)0.0100 (6)−0.0032 (6)−0.0054 (6)
C150.0570 (8)0.0345 (6)0.0403 (7)−0.0013 (6)0.0035 (6)0.0052 (5)
C160.0460 (7)0.0368 (6)0.0330 (6)0.0014 (5)0.0113 (5)0.0029 (5)
O1—C21.2333 (14)C4—H4B0.9900
O2—C81.2360 (13)C5—C81.5114 (15)
N1—C21.3659 (15)C5—C61.5270 (17)
N1—C111.4127 (15)C5—H51.0000
N1—H10.834 (17)C6—C71.5249 (18)
N2—C21.3560 (15)C6—H6A0.9900
N2—C71.4588 (16)C6—H6B0.9900
N2—C31.4605 (15)C7—H7A0.9900
N3—C81.3235 (14)C7—H7B0.9900
N3—H3A0.886 (18)C11—C121.3763 (17)
N3—H3B0.890 (17)C11—C161.3863 (17)
C1—C141.513 (2)C12—C131.387 (2)
C1—H1A0.9800C12—H120.9500
C1—H1B0.9800C13—C141.383 (2)
C1—H1C0.9800C13—H130.9500
C3—C41.5151 (16)C14—C151.377 (2)
C3—H3C0.9900C15—C161.3852 (18)
C3—H3D0.9900C15—H150.9500
C4—C51.5238 (16)C16—H160.9500
C4—H4A0.9900
C2—N1—C11124.85 (10)C6—C5—H5108.5
C2—N1—H1119.3 (11)C7—C6—C5110.61 (11)
C11—N1—H1115.8 (11)C7—C6—H6A109.5
C2—N2—C7120.14 (10)C5—C6—H6A109.5
C2—N2—C3125.68 (10)C7—C6—H6B109.5
C7—N2—C3112.74 (10)C5—C6—H6B109.5
C8—N3—H3A117.0 (11)H6A—C6—H6B108.1
C8—N3—H3B120.2 (10)N2—C7—C6110.00 (10)
H3A—N3—H3B122.7 (15)N2—C7—H7A109.7
C14—C1—H1A109.5C6—C7—H7A109.7
C14—C1—H1B109.5N2—C7—H7B109.7
H1A—C1—H1B109.5C6—C7—H7B109.7
C14—C1—H1C109.5H7A—C7—H7B108.2
H1A—C1—H1C109.5O2—C8—N3122.17 (11)
H1B—C1—H1C109.5O2—C8—C5121.06 (10)
O1—C2—N2122.28 (11)N3—C8—C5116.76 (10)
O1—C2—N1121.69 (11)C12—C11—C16118.82 (11)
N2—C2—N1116.01 (10)C12—C11—N1118.89 (11)
N2—C3—C4109.95 (10)C16—C11—N1122.10 (11)
N2—C3—H3C109.7C11—C12—C13120.15 (13)
C4—C3—H3C109.7C11—C12—H12119.9
N2—C3—H3D109.7C13—C12—H12119.9
C4—C3—H3D109.7C14—C13—C12121.80 (14)
H3C—C3—H3D108.2C14—C13—H13119.1
C3—C4—C5110.57 (10)C12—C13—H13119.1
C3—C4—H4A109.5C15—C14—C13117.23 (13)
C5—C4—H4A109.5C15—C14—C1121.33 (16)
C3—C4—H4B109.5C13—C14—C1121.42 (16)
C5—C4—H4B109.5C14—C15—C16121.86 (13)
H4A—C4—H4B108.1C14—C15—H15119.1
C8—C5—C4110.93 (9)C16—C15—H15119.1
C8—C5—C6110.94 (10)C15—C16—C11120.11 (12)
C4—C5—C6109.52 (9)C15—C16—H16119.9
C8—C5—H5108.5C11—C16—H16119.9
C4—C5—H5108.5
C7—N2—C2—O1−3.0 (2)C4—C5—C8—O250.08 (16)
C3—N2—C2—O1162.27 (13)C6—C5—C8—O2−71.88 (15)
C7—N2—C2—N1175.02 (12)C4—C5—C8—N3−130.68 (12)
C3—N2—C2—N1−19.70 (19)C6—C5—C8—N3107.35 (13)
C11—N1—C2—O1−18.65 (19)C2—N1—C11—C12151.54 (13)
C11—N1—C2—N2163.31 (11)C2—N1—C11—C16−33.52 (18)
C2—N2—C3—C4134.00 (13)C16—C11—C12—C13−1.4 (2)
C7—N2—C3—C4−59.78 (15)N1—C11—C12—C13173.76 (13)
N2—C3—C4—C557.39 (13)C11—C12—C13—C140.5 (2)
C3—C4—C5—C8−178.42 (9)C12—C13—C14—C150.9 (2)
C3—C4—C5—C6−55.63 (13)C12—C13—C14—C1179.54 (16)
C8—C5—C6—C7177.79 (10)C13—C14—C15—C16−1.5 (2)
C4—C5—C6—C755.01 (13)C1—C14—C15—C16179.85 (15)
C2—N2—C7—C6−133.78 (13)C14—C15—C16—C110.7 (2)
C3—N2—C7—C659.15 (16)C12—C11—C16—C150.76 (19)
C5—C6—C7—N2−56.27 (16)N1—C11—C16—C15−174.18 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.834 (17)2.128 (17)2.9481 (13)167.9 (15)
N3—H3A···O2ii0.886 (18)2.071 (18)2.9451 (14)168.9 (15)
N3—H3B···O2iii0.890 (17)2.034 (17)2.8875 (13)160.3 (15)
C3—H3C···O1i0.992.413.2987 (17)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1i 0.834 (17)2.128 (17)2.9481 (13)167.9 (15)
N3—H3A⋯O2ii 0.886 (18)2.071 (18)2.9451 (14)168.9 (15)
N3—H3B⋯O2iii 0.890 (17)2.034 (17)2.8875 (13)160.3 (15)
C3—H3C⋯O1i 0.992.413.2987 (17)149

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  Synthesis and biological evaluation of piperidine-substituted triazine derivatives as HIV-1 non-nucleoside reverse transcriptase inhibitors.

Authors:  Xuwang Chen; Peng Zhan; Christophe Pannecouque; Jan Balzarini; Erik De Clercq; Xinyong Liu
Journal:  Eur J Med Chem       Date:  2012-02-15       Impact factor: 6.514

2.  Synthesis of novel N-benzyl substituted piperidine amides of 1H-indole-5-carboxylic acid as potential inhibitors of cholinesterases.

Authors:  Anna Jakubowska; Katarzyna Kulig; Natalia Guzior; Barbara Malawska
Journal:  Acta Pol Pharm       Date:  2012 May-Jun       Impact factor: 0.330

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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