| Literature DB >> 23476238 |
Paul Kosma1, Edgar Selzer, Kurt Mereiter.
Abstract
The mol-ecular structure of the title compound, C20H18N2O5S·C3H7NO, represents an essentially planar 5-benzyl-idene-thia-zolidine moiety (r.m.s. deviation from planarity without ring substituents = 0.095 Å) to which the 4-amino-benzoic acid fragment is inclined at 76.23 (1)°. In the crystal, the benzoic acid mol-ecules are arranged in layers parallel to [001] which are built up from inversion dimers held together by head-to-tail phenol-carb-oxy O-H⋯O hydrogen bonds and head-to-tail π-π stacking inter-actions between the 5-benzyl-idene-thia-zolidine moieties (ring centroid distance = 3.579 Å). These layers are separated by the dimethyl-formamide solvent mol-ecules which are firmly anchored via a short O-H⋯O hydrogen bond [O⋯O = 2.5529 (10) Å] donated by the -COOH group.Entities:
Year: 2012 PMID: 23476238 PMCID: PMC3589002 DOI: 10.1107/S1600536812047307
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H18N2O5S·C3H7NO | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 9007 reflections | |
| θ = 2.2–30.0° | |
| µ = 0.19 mm−1 | |
| α = 86.390 (2)° | |
| β = 89.813 (2)° | Prism, yellow |
| γ = 87.656 (2)° | 0.53 × 0.35 × 0.24 mm |
| Bruker Kappa APEXII CCD diffractometer | 6537 independent reflections |
| Radiation source: fine-focus sealed tube | 5993 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 30.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 29040 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 6537 reflections | (Δ/σ)max = 0.002 |
| 304 parameters | Δρmax = 0.51 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.41930 (3) | 0.65538 (2) | 0.349946 (14) | 0.01698 (6) | |
| O1 | 0.80606 (9) | 0.38102 (8) | 0.35244 (5) | 0.02040 (14) | |
| O2 | 0.37560 (9) | 0.96319 (8) | 0.62843 (5) | 0.02005 (14) | |
| O3 | 0.65049 (10) | 0.96754 (8) | 0.73138 (5) | 0.02233 (15) | |
| H3o | 0.5526 | 1.0091 | 0.7342 | 0.033* | |
| O4 | −0.39179 (10) | 0.90766 (9) | 0.17578 (5) | 0.02725 (17) | |
| O5 | −0.23650 (9) | 1.02278 (8) | 0.07406 (5) | 0.02368 (16) | |
| H5o | −0.3306 | 1.0689 | 0.0647 | 0.036* | |
| N1 | 0.57050 (10) | 0.44691 (8) | 0.26982 (5) | 0.01658 (15) | |
| N2 | 0.33188 (11) | 0.54753 (9) | 0.19732 (5) | 0.01936 (16) | |
| C1 | 0.43011 (12) | 0.54409 (10) | 0.26183 (6) | 0.01595 (16) | |
| C2 | 0.60871 (14) | 0.34431 (11) | 0.20524 (7) | 0.02270 (19) | |
| H2A | 0.7153 | 0.2885 | 0.2205 | 0.034* | |
| H2B | 0.6232 | 0.3965 | 0.1496 | 0.034* | |
| H2C | 0.5133 | 0.2789 | 0.2022 | 0.034* | |
| C3 | 0.67482 (12) | 0.45592 (10) | 0.33963 (6) | 0.01610 (16) | |
| C4 | 0.60700 (12) | 0.56946 (10) | 0.39437 (6) | 0.01610 (16) | |
| C5 | 0.69539 (12) | 0.59362 (10) | 0.46550 (6) | 0.01749 (17) | |
| H5 | 0.7951 | 0.5316 | 0.4740 | 0.021* | |
| C6 | 0.67052 (12) | 0.69420 (10) | 0.53172 (6) | 0.01676 (17) | |
| C7 | 0.52167 (12) | 0.78354 (10) | 0.54232 (6) | 0.01713 (17) | |
| H7 | 0.4277 | 0.7816 | 0.5037 | 0.021* | |
| C8 | 0.51260 (12) | 0.87446 (10) | 0.60936 (6) | 0.01695 (17) | |
| C9 | 0.65368 (12) | 0.87976 (10) | 0.66581 (6) | 0.01783 (17) | |
| C10 | 0.79983 (13) | 0.79211 (11) | 0.65505 (6) | 0.01950 (18) | |
| H10 | 0.8948 | 0.7954 | 0.6929 | 0.023* | |
| C11 | 0.80769 (12) | 0.69964 (10) | 0.58921 (6) | 0.01877 (18) | |
| H11 | 0.9078 | 0.6389 | 0.5829 | 0.023* | |
| C12 | 0.22371 (12) | 0.96318 (10) | 0.57563 (6) | 0.01843 (17) | |
| H12A | 0.1783 | 0.8652 | 0.5764 | 0.022* | |
| H12B | 0.2514 | 0.9948 | 0.5159 | 0.022* | |
| C13 | 0.09223 (13) | 1.06669 (11) | 0.61232 (7) | 0.02253 (19) | |
| H13A | 0.0657 | 1.0338 | 0.6713 | 0.034* | |
| H13B | −0.0134 | 1.0705 | 0.5780 | 0.034* | |
| H13C | 0.1392 | 1.1629 | 0.6115 | 0.034* | |
| C14 | 0.18954 (12) | 0.64677 (10) | 0.18805 (6) | 0.01736 (17) | |
| C15 | 0.03664 (13) | 0.62483 (11) | 0.23377 (6) | 0.02102 (19) | |
| H15 | 0.0308 | 0.5477 | 0.2762 | 0.025* | |
| C16 | −0.10619 (13) | 0.71632 (11) | 0.21680 (6) | 0.02002 (18) | |
| H16 | −0.2100 | 0.7017 | 0.2479 | 0.024* | |
| C17 | −0.09940 (12) | 0.82963 (10) | 0.15451 (6) | 0.01648 (17) | |
| C18 | 0.05412 (12) | 0.85138 (10) | 0.10947 (6) | 0.01830 (17) | |
| H18 | 0.0599 | 0.9289 | 0.0673 | 0.022* | |
| C19 | 0.19814 (12) | 0.76057 (11) | 0.12589 (6) | 0.01939 (18) | |
| H19 | 0.3021 | 0.7757 | 0.0950 | 0.023* | |
| C20 | −0.25683 (12) | 0.92308 (11) | 0.13672 (6) | 0.01868 (18) | |
| O6 | −0.49662 (10) | 1.18732 (8) | 0.02984 (5) | 0.02426 (16) | |
| N3 | −0.76655 (11) | 1.27974 (10) | 0.05269 (6) | 0.02176 (17) | |
| C21 | −0.63956 (13) | 1.18080 (11) | 0.06532 (6) | 0.02044 (18) | |
| H21 | −0.6593 | 1.1002 | 0.1038 | 0.025* | |
| C22 | −0.74498 (16) | 1.40627 (12) | −0.00518 (7) | 0.0282 (2) | |
| H22A | −0.7384 | 1.4918 | 0.0279 | 0.042* | |
| H22B | −0.8436 | 1.4184 | −0.0442 | 0.042* | |
| H22C | −0.6384 | 1.3938 | −0.0381 | 0.042* | |
| C23 | −0.92669 (15) | 1.27171 (13) | 0.10088 (8) | 0.0296 (2) | |
| H23A | −0.9239 | 1.1831 | 0.1381 | 0.044* | |
| H23B | −1.0242 | 1.2713 | 0.0613 | 0.044* | |
| H23C | −0.9399 | 1.3553 | 0.1357 | 0.044* |
| S1 | 0.01676 (11) | 0.01661 (11) | 0.01742 (11) | 0.00188 (8) | −0.00169 (8) | −0.00148 (8) |
| O1 | 0.0160 (3) | 0.0205 (3) | 0.0241 (3) | 0.0017 (2) | −0.0018 (3) | 0.0007 (3) |
| O2 | 0.0156 (3) | 0.0244 (3) | 0.0204 (3) | 0.0021 (3) | −0.0045 (2) | −0.0046 (3) |
| O3 | 0.0187 (3) | 0.0284 (4) | 0.0204 (3) | 0.0015 (3) | −0.0037 (3) | −0.0071 (3) |
| O4 | 0.0177 (3) | 0.0369 (4) | 0.0265 (4) | 0.0031 (3) | 0.0047 (3) | −0.0001 (3) |
| O5 | 0.0171 (3) | 0.0238 (4) | 0.0289 (4) | 0.0042 (3) | 0.0005 (3) | 0.0049 (3) |
| N1 | 0.0170 (4) | 0.0158 (3) | 0.0168 (3) | 0.0017 (3) | −0.0013 (3) | −0.0016 (3) |
| N2 | 0.0195 (4) | 0.0195 (4) | 0.0187 (4) | 0.0026 (3) | −0.0031 (3) | −0.0005 (3) |
| C1 | 0.0158 (4) | 0.0148 (4) | 0.0170 (4) | −0.0002 (3) | 0.0000 (3) | 0.0007 (3) |
| C2 | 0.0264 (5) | 0.0214 (4) | 0.0203 (4) | 0.0046 (4) | −0.0009 (4) | −0.0053 (3) |
| C3 | 0.0157 (4) | 0.0153 (4) | 0.0172 (4) | −0.0025 (3) | −0.0001 (3) | 0.0013 (3) |
| C4 | 0.0151 (4) | 0.0154 (4) | 0.0176 (4) | −0.0013 (3) | −0.0001 (3) | 0.0006 (3) |
| C5 | 0.0160 (4) | 0.0176 (4) | 0.0187 (4) | −0.0014 (3) | −0.0006 (3) | 0.0007 (3) |
| C6 | 0.0158 (4) | 0.0176 (4) | 0.0168 (4) | −0.0021 (3) | −0.0013 (3) | 0.0009 (3) |
| C7 | 0.0150 (4) | 0.0191 (4) | 0.0172 (4) | −0.0024 (3) | −0.0030 (3) | 0.0011 (3) |
| C8 | 0.0147 (4) | 0.0184 (4) | 0.0175 (4) | −0.0018 (3) | −0.0012 (3) | 0.0011 (3) |
| C9 | 0.0168 (4) | 0.0206 (4) | 0.0162 (4) | −0.0030 (3) | −0.0015 (3) | −0.0001 (3) |
| C10 | 0.0159 (4) | 0.0241 (4) | 0.0184 (4) | −0.0011 (3) | −0.0040 (3) | −0.0005 (3) |
| C11 | 0.0156 (4) | 0.0211 (4) | 0.0194 (4) | 0.0000 (3) | −0.0025 (3) | 0.0003 (3) |
| C12 | 0.0155 (4) | 0.0204 (4) | 0.0194 (4) | −0.0010 (3) | −0.0038 (3) | −0.0007 (3) |
| C13 | 0.0184 (4) | 0.0230 (5) | 0.0262 (5) | 0.0011 (3) | −0.0025 (4) | −0.0029 (4) |
| C14 | 0.0176 (4) | 0.0187 (4) | 0.0158 (4) | 0.0010 (3) | −0.0037 (3) | −0.0021 (3) |
| C15 | 0.0227 (5) | 0.0222 (4) | 0.0175 (4) | 0.0000 (3) | 0.0003 (3) | 0.0032 (3) |
| C16 | 0.0185 (4) | 0.0234 (4) | 0.0180 (4) | −0.0016 (3) | 0.0024 (3) | 0.0006 (3) |
| C17 | 0.0148 (4) | 0.0189 (4) | 0.0158 (4) | −0.0003 (3) | −0.0004 (3) | −0.0023 (3) |
| C18 | 0.0163 (4) | 0.0189 (4) | 0.0193 (4) | −0.0002 (3) | 0.0006 (3) | 0.0019 (3) |
| C19 | 0.0157 (4) | 0.0210 (4) | 0.0210 (4) | 0.0001 (3) | 0.0012 (3) | 0.0017 (3) |
| C20 | 0.0163 (4) | 0.0214 (4) | 0.0186 (4) | 0.0002 (3) | −0.0007 (3) | −0.0040 (3) |
| O6 | 0.0219 (4) | 0.0275 (4) | 0.0226 (3) | 0.0059 (3) | −0.0010 (3) | 0.0004 (3) |
| N3 | 0.0206 (4) | 0.0220 (4) | 0.0226 (4) | 0.0031 (3) | −0.0031 (3) | −0.0029 (3) |
| C21 | 0.0223 (5) | 0.0210 (4) | 0.0180 (4) | 0.0021 (3) | −0.0045 (3) | −0.0018 (3) |
| C22 | 0.0351 (6) | 0.0217 (5) | 0.0268 (5) | 0.0067 (4) | −0.0057 (4) | 0.0010 (4) |
| C23 | 0.0212 (5) | 0.0342 (6) | 0.0344 (6) | 0.0010 (4) | 0.0011 (4) | −0.0103 (5) |
| S1—C4 | 1.7564 (10) | C11—H11 | 0.9500 |
| S1—C1 | 1.7793 (9) | C12—C13 | 1.5116 (14) |
| O1—C3 | 1.2197 (12) | C12—H12A | 0.9900 |
| O2—C8 | 1.3628 (11) | C12—H12B | 0.9900 |
| O2—C12 | 1.4423 (11) | C13—H13A | 0.9800 |
| O3—C9 | 1.3533 (12) | C13—H13B | 0.9800 |
| O3—H3o | 0.8400 | C13—H13C | 0.9800 |
| O4—C20 | 1.2200 (12) | C14—C19 | 1.3978 (13) |
| O5—C20 | 1.3227 (12) | C14—C15 | 1.3993 (13) |
| O5—H5o | 0.8400 | C15—C16 | 1.3852 (14) |
| N1—C3 | 1.3729 (12) | C15—H15 | 0.9500 |
| N1—C1 | 1.3873 (12) | C16—C17 | 1.3948 (13) |
| N1—C2 | 1.4575 (12) | C16—H16 | 0.9500 |
| N2—C1 | 1.2671 (12) | C17—C18 | 1.3978 (13) |
| N2—C14 | 1.4118 (12) | C17—C20 | 1.4863 (13) |
| C2—H2A | 0.9800 | C18—C19 | 1.3874 (13) |
| C2—H2B | 0.9800 | C18—H18 | 0.9500 |
| C2—H2C | 0.9800 | C19—H19 | 0.9500 |
| C3—C4 | 1.4824 (13) | O6—C21 | 1.2406 (13) |
| C4—C5 | 1.3475 (13) | N3—C21 | 1.3270 (13) |
| C5—C6 | 1.4494 (13) | N3—C23 | 1.4539 (14) |
| C5—H5 | 0.9500 | N3—C22 | 1.4563 (14) |
| C6—C11 | 1.4015 (13) | C21—H21 | 0.9500 |
| C6—C7 | 1.4103 (13) | C22—H22A | 0.9800 |
| C7—C8 | 1.3912 (13) | C22—H22B | 0.9800 |
| C7—H7 | 0.9500 | C22—H22C | 0.9800 |
| C8—C9 | 1.4143 (13) | C23—H23A | 0.9800 |
| C9—C10 | 1.3851 (14) | C23—H23B | 0.9800 |
| C10—C11 | 1.3857 (14) | C23—H23C | 0.9800 |
| C10—H10 | 0.9500 | ||
| C4—S1—C1 | 91.11 (4) | C13—C12—H12B | 110.4 |
| C8—O2—C12 | 117.96 (7) | H12A—C12—H12B | 108.6 |
| C9—O3—H3o | 109.5 | C12—C13—H13A | 109.5 |
| C20—O5—H5o | 109.5 | C12—C13—H13B | 109.5 |
| C3—N1—C1 | 116.78 (8) | H13A—C13—H13B | 109.5 |
| C3—N1—C2 | 121.81 (8) | C12—C13—H13C | 109.5 |
| C1—N1—C2 | 121.36 (8) | H13A—C13—H13C | 109.5 |
| C1—N2—C14 | 121.40 (8) | H13B—C13—H13C | 109.5 |
| N2—C1—N1 | 120.85 (8) | C19—C14—C15 | 120.18 (9) |
| N2—C1—S1 | 128.47 (7) | C19—C14—N2 | 118.40 (9) |
| N1—C1—S1 | 110.67 (7) | C15—C14—N2 | 121.13 (9) |
| N1—C2—H2A | 109.5 | C16—C15—C14 | 119.55 (9) |
| N1—C2—H2B | 109.5 | C16—C15—H15 | 120.2 |
| H2A—C2—H2B | 109.5 | C14—C15—H15 | 120.2 |
| N1—C2—H2C | 109.5 | C15—C16—C17 | 120.75 (9) |
| H2A—C2—H2C | 109.5 | C15—C16—H16 | 119.6 |
| H2B—C2—H2C | 109.5 | C17—C16—H16 | 119.6 |
| O1—C3—N1 | 123.42 (9) | C16—C17—C18 | 119.36 (9) |
| O1—C3—C4 | 125.97 (9) | C16—C17—C20 | 119.06 (8) |
| N1—C3—C4 | 110.60 (8) | C18—C17—C20 | 121.57 (8) |
| C5—C4—C3 | 118.33 (8) | C19—C18—C17 | 120.46 (9) |
| C5—C4—S1 | 130.83 (8) | C19—C18—H18 | 119.8 |
| C3—C4—S1 | 110.81 (7) | C17—C18—H18 | 119.8 |
| C4—C5—C6 | 133.55 (9) | C18—C19—C14 | 119.69 (9) |
| C4—C5—H5 | 113.2 | C18—C19—H19 | 120.2 |
| C6—C5—H5 | 113.2 | C14—C19—H19 | 120.2 |
| C11—C6—C7 | 118.94 (9) | O4—C20—O5 | 123.61 (9) |
| C11—C6—C5 | 115.68 (8) | O4—C20—C17 | 122.94 (9) |
| C7—C6—C5 | 125.38 (8) | O5—C20—C17 | 113.45 (8) |
| C8—C7—C6 | 119.89 (9) | C21—N3—C23 | 121.33 (9) |
| C8—C7—H7 | 120.1 | C21—N3—C22 | 120.97 (9) |
| C6—C7—H7 | 120.1 | C23—N3—C22 | 117.53 (9) |
| O2—C8—C7 | 126.07 (9) | O6—C21—N3 | 123.87 (10) |
| O2—C8—C9 | 113.74 (8) | O6—C21—H21 | 118.1 |
| C7—C8—C9 | 120.18 (9) | N3—C21—H21 | 118.1 |
| O3—C9—C10 | 118.26 (9) | N3—C22—H22A | 109.5 |
| O3—C9—C8 | 121.99 (9) | N3—C22—H22B | 109.5 |
| C10—C9—C8 | 119.74 (9) | H22A—C22—H22B | 109.5 |
| C9—C10—C11 | 120.09 (9) | N3—C22—H22C | 109.5 |
| C9—C10—H10 | 120.0 | H22A—C22—H22C | 109.5 |
| C11—C10—H10 | 120.0 | H22B—C22—H22C | 109.5 |
| C10—C11—C6 | 121.14 (9) | N3—C23—H23A | 109.5 |
| C10—C11—H11 | 119.4 | N3—C23—H23B | 109.5 |
| C6—C11—H11 | 119.4 | H23A—C23—H23B | 109.5 |
| O2—C12—C13 | 106.71 (8) | N3—C23—H23C | 109.5 |
| O2—C12—H12A | 110.4 | H23A—C23—H23C | 109.5 |
| C13—C12—H12A | 110.4 | H23B—C23—H23C | 109.5 |
| O2—C12—H12B | 110.4 | ||
| C14—N2—C1—N1 | −179.41 (8) | O2—C8—C9—O3 | −0.99 (13) |
| C14—N2—C1—S1 | −1.09 (14) | C7—C8—C9—O3 | 179.48 (9) |
| C3—N1—C1—N2 | 176.75 (9) | O2—C8—C9—C10 | 178.36 (9) |
| C2—N1—C1—N2 | −0.86 (14) | C7—C8—C9—C10 | −1.18 (14) |
| C3—N1—C1—S1 | −1.85 (10) | O3—C9—C10—C11 | 179.38 (9) |
| C2—N1—C1—S1 | −179.46 (7) | C8—C9—C10—C11 | 0.01 (14) |
| C4—S1—C1—N2 | −177.56 (9) | C9—C10—C11—C6 | 0.98 (15) |
| C4—S1—C1—N1 | 0.90 (7) | C7—C6—C11—C10 | −0.81 (14) |
| C1—N1—C3—O1 | −176.93 (8) | C5—C6—C11—C10 | 179.63 (9) |
| C2—N1—C3—O1 | 0.67 (14) | C8—O2—C12—C13 | 178.41 (8) |
| C1—N1—C3—C4 | 1.95 (11) | C1—N2—C14—C19 | 108.96 (11) |
| C2—N1—C3—C4 | 179.54 (8) | C1—N2—C14—C15 | −77.22 (13) |
| O1—C3—C4—C5 | −0.48 (14) | C19—C14—C15—C16 | 0.23 (15) |
| N1—C3—C4—C5 | −179.32 (8) | N2—C14—C15—C16 | −173.49 (9) |
| O1—C3—C4—S1 | 177.69 (8) | C14—C15—C16—C17 | 0.20 (15) |
| N1—C3—C4—S1 | −1.15 (9) | C15—C16—C17—C18 | −0.59 (15) |
| C1—S1—C4—C5 | 178.01 (10) | C15—C16—C17—C20 | 178.47 (9) |
| C1—S1—C4—C3 | 0.14 (7) | C16—C17—C18—C19 | 0.56 (14) |
| C3—C4—C5—C6 | 178.92 (9) | C20—C17—C18—C19 | −178.48 (9) |
| S1—C4—C5—C6 | 1.18 (17) | C17—C18—C19—C14 | −0.13 (15) |
| C4—C5—C6—C11 | −170.63 (10) | C15—C14—C19—C18 | −0.27 (15) |
| C4—C5—C6—C7 | 9.84 (17) | N2—C14—C19—C18 | 173.62 (9) |
| C11—C6—C7—C8 | −0.36 (13) | C16—C17—C20—O4 | 1.91 (15) |
| C5—C6—C7—C8 | 179.15 (9) | C18—C17—C20—O4 | −179.04 (10) |
| C12—O2—C8—C7 | 0.83 (14) | C16—C17—C20—O5 | −177.34 (9) |
| C12—O2—C8—C9 | −178.67 (8) | C18—C17—C20—O5 | 1.71 (13) |
| C6—C7—C8—O2 | −178.13 (9) | C23—N3—C21—O6 | −175.35 (10) |
| C6—C7—C8—C9 | 1.34 (14) | C22—N3—C21—O6 | −0.22 (16) |
| H··· | ||||
| O5—H5 | 0.84 | 1.73 | 2.5529 (10) | 167 |
| O3—H3 | 0.84 | 2.05 | 2.7386 (11) | 139 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5—H5 | 0.84 | 1.73 | 2.5529 (10) | 167 |
| O3—H3 | 0.84 | 2.05 | 2.7386 (11) | 139 |
Symmetry code: (i) .