Literature DB >> 23476221

(2aR*,5S*,6aS*,8aS*,E)-Ethyl 5-hy-droxy-7,7,8a-trimethyl-8-oxo-2,2a,6,6a,7,8,8a,8b-octa-hydro-1H-penta-leno[1,6-bc]oxepine-4-carboxyl-ate.

Goverdhan Mehta1, C S Ananda Kumar, Saikat Sen.   

Abstract

The title compound, C17H24O5, featuring a 2-carbeth-oxy-3-oxepanone unit in its intra-molecularly O-H⋯O hydrogen-bonded enol form, was obtained via [(CF3CO2)2Rh]2-catal-ysed intra-molecular O-H bond insertion in the α-diazo-ω-hy-droxy-β-ketoester, ethyl 4-[(1S,3aS,6R,6aS)-6-hy-droxy-2,2,3a-trimethyl-3-oxo-octa-hydro-penta-len-1-yl]-2-diazo-3-oxobutano-ate. The seven-membered oxacyclic ring, thus constructed on a cis-fused diquinane platform, was found to adopt a distorted boat-sofa conformation.

Entities:  

Year:  2012        PMID: 23476221      PMCID: PMC3588985          DOI: 10.1107/S1600536812046776

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For rhodium carbenoid-mediated inter­molecular O—H inser­tion reactions and their application to natural product synthesis, see: Paulissen et al. (1973 ▶); Cox et al. (1994 ▶); Haigh (1994 ▶); Aller et al. (1995 ▶); Shi et al. (1995 ▶); Bulugahapitiya et al. (1997 ▶); Moody & Miller (1998 ▶); Nelson et al. (2000 ▶); Medeiros & Wood (2010 ▶); Freeman et al. (2010 ▶); Morton et al. (2012 ▶). For rhodium-catalysed intra­molecular O—H insertion reactions, see: Paulissen et al. (1974 ▶); Moyer et al. (1985 ▶); Moody & Taylor (1987 ▶); Heslin & Moody (1988 ▶); Davies et al. (1990 ▶); Moody et al. (1992 ▶); Sarabia-Garciá et al. (1994) ▶; Pad­wa & Sá (1999 ▶); Im et al. (2005 ▶). For reviews on rhodium-mediated C—H insertion reactions, see: Doyle et al. (2010 ▶); Davies & Morton (2011 ▶). For the con­struction of an angularly fused triquinane skeleton via RhII-catalysed intra­molecular C—H insertion, see: Srikrishna et al. (2012 ▶). For the isolation and synthesis of penifulvin A, see: Shim et al. (2006 ▶); Gaich & Mulzer (2009 ▶); Mehta & Khan (2012 ▶). For the application of p-acetamido­benzene­sulfonyl azide as a diazo trans­fer reagent, see: Baum et al. (1987 ▶). For ring conformations, see: Cremer & Pople (1975 ▶); Boessenkool & Boeyens (1980 ▶).

Experimental

Crystal data

C17H24O5 M = 308.36 Orthorhombic, a = 8.447 (5) Å b = 18.454 (14) Å c = 21.735 (15) Å V = 3388 (4) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 291 K 0.20 × 0.18 × 0.08 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.983, T max = 0.993 14606 measured reflections 3153 independent reflections 1408 reflections with I > 2σ(I) R int = 0.087

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.149 S = 0.89 3153 reflections 207 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812046776/ds2220sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046776/ds2220Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H24O5F(000) = 1328
Mr = 308.36Dx = 1.209 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 939 reflections
a = 8.447 (5) Åθ = 2.8–19.5°
b = 18.454 (14) ŵ = 0.09 mm1
c = 21.735 (15) ÅT = 291 K
V = 3388 (4) Å3Plate, colorless
Z = 80.20 × 0.18 × 0.08 mm
Bruker APEXII CCD diffractometer3153 independent reflections
Radiation source: fine-focus sealed tube1408 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.087
φ and ω scansθmax = 25.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −10→7
Tmin = 0.983, Tmax = 0.993k = −22→18
14606 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H atoms treated by a mixture of independent and constrained refinement
S = 0.89w = 1/[σ2(Fo2) + (0.0717P)2] where P = (Fo2 + 2Fc2)/3
3153 reflections(Δ/σ)max < 0.001
207 parametersΔρmax = 0.17 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1027 (3)0.15812 (15)1.02261 (10)0.0990 (9)
O20.0947 (2)0.13477 (12)0.69261 (9)0.0655 (6)
H2O0.125 (4)0.0976 (18)0.6660 (15)0.090 (12)*
O30.1391 (2)−0.00529 (10)0.80956 (7)0.0545 (5)
O40.1993 (2)0.01550 (12)0.64764 (8)0.0717 (6)
O50.2612 (2)−0.07327 (12)0.71407 (8)0.0678 (6)
C10.0661 (3)0.12205 (14)0.86389 (11)0.0471 (7)
H1−0.00580.08100.86990.057*
C20.0332 (3)0.17697 (15)0.91600 (12)0.0544 (8)
C30.1256 (3)0.14428 (17)0.96932 (13)0.0623 (8)
C40.2513 (3)0.09177 (16)0.94596 (12)0.0568 (8)
C50.2035 (5)0.01234 (18)0.95976 (14)0.0888 (11)
H5A0.2518−0.00390.99780.107*
H5B0.08950.00830.96370.107*
C60.2602 (5)−0.03189 (19)0.90749 (14)0.0906 (12)
H6A0.1898−0.07260.90060.109*
H6B0.3655−0.05040.91580.109*
C70.2627 (3)0.01697 (15)0.85202 (12)0.0575 (8)
H70.36610.01390.83170.069*
C80.2347 (3)0.09461 (14)0.87520 (11)0.0474 (7)
H80.31250.12800.85740.057*
C90.4153 (4)0.1103 (2)0.97087 (15)0.0970 (12)
H9A0.44490.15800.95730.145*
H9B0.49080.07570.95590.145*
H9C0.41330.10901.01500.145*
C10−0.1415 (4)0.1859 (2)0.93120 (14)0.0795 (11)
H10A−0.18680.13940.94000.119*
H10B−0.19520.20720.89670.119*
H10C−0.15270.21680.96640.119*
C110.1093 (4)0.25222 (16)0.90386 (15)0.0781 (10)
H11A0.10310.28110.94050.117*
H11B0.05370.27610.87110.117*
H11C0.21830.24600.89250.117*
C120.0415 (3)0.14979 (16)0.79823 (11)0.0569 (8)
H12A−0.07040.15950.79250.068*
H12B0.09710.19550.79400.068*
C130.0951 (3)0.10042 (16)0.74780 (12)0.0510 (7)
C140.1445 (3)0.03157 (16)0.75362 (11)0.0512 (7)
C150.2038 (3)−0.00865 (17)0.70042 (13)0.0572 (8)
C160.3258 (4)−0.11534 (19)0.66252 (15)0.0833 (11)
H16A0.2406−0.13290.63660.100*
H16B0.3950−0.08520.63780.100*
C170.4146 (6)−0.1765 (2)0.68814 (18)0.1264 (17)
H17A0.4935−0.15870.71610.190*
H17B0.4650−0.20270.65540.190*
H17C0.3435−0.20810.70970.190*
U11U22U33U12U13U23
O10.113 (2)0.137 (2)0.0465 (13)0.0369 (16)−0.0008 (12)−0.0152 (14)
O20.0791 (15)0.0722 (16)0.0452 (12)0.0013 (12)−0.0053 (10)0.0083 (12)
O30.0605 (13)0.0555 (13)0.0474 (11)−0.0043 (9)0.0016 (9)−0.0012 (9)
O40.0820 (16)0.0883 (16)0.0448 (12)0.0032 (12)0.0027 (10)−0.0031 (11)
O50.0850 (16)0.0645 (14)0.0540 (12)0.0051 (12)0.0061 (10)−0.0092 (11)
C10.0407 (18)0.0550 (17)0.0456 (16)−0.0004 (13)−0.0013 (12)−0.0012 (13)
C20.0495 (19)0.060 (2)0.0541 (17)0.0038 (15)−0.0001 (13)−0.0068 (15)
C30.063 (2)0.078 (2)0.0463 (18)−0.0012 (17)−0.0008 (15)−0.0052 (16)
C40.054 (2)0.073 (2)0.0438 (15)0.0052 (16)−0.0048 (13)−0.0029 (15)
C50.117 (3)0.085 (3)0.064 (2)0.019 (2)0.0199 (19)0.023 (2)
C60.128 (3)0.076 (2)0.067 (2)0.010 (2)−0.022 (2)0.013 (2)
C70.058 (2)0.0618 (19)0.0524 (16)0.0087 (15)−0.0061 (14)−0.0047 (15)
C80.0385 (17)0.0557 (18)0.0481 (15)0.0009 (14)−0.0004 (12)−0.0002 (13)
C90.060 (2)0.151 (4)0.080 (2)0.010 (2)−0.0213 (18)−0.031 (2)
C100.059 (2)0.103 (3)0.076 (2)0.0165 (19)0.0071 (17)−0.0200 (19)
C110.091 (2)0.063 (2)0.081 (2)−0.0007 (19)−0.0015 (18)−0.0131 (18)
C120.059 (2)0.0625 (19)0.0496 (16)0.0101 (15)−0.0062 (13)0.0010 (14)
C130.0500 (18)0.063 (2)0.0404 (15)−0.0043 (15)−0.0073 (12)0.0002 (15)
C140.0520 (19)0.063 (2)0.0388 (15)−0.0052 (15)0.0005 (12)−0.0016 (14)
C150.054 (2)0.064 (2)0.0535 (19)−0.0055 (17)0.0008 (14)−0.0021 (16)
C160.100 (3)0.077 (2)0.073 (2)0.005 (2)0.0090 (19)−0.026 (2)
C170.194 (5)0.076 (3)0.109 (3)0.047 (3)0.008 (3)−0.010 (2)
O1—C31.202 (3)C6—H6B0.9700
O2—C131.357 (3)C7—C81.537 (4)
O2—H2O0.93 (3)C7—H70.9800
O3—C141.394 (3)C8—H80.9800
O3—C71.452 (3)C9—H9A0.9600
O4—C151.231 (3)C9—H9B0.9600
O5—C151.321 (3)C9—H9C0.9600
O5—C161.468 (3)C10—H10A0.9600
C1—C121.530 (3)C10—H10B0.9600
C1—C81.531 (3)C10—H10C0.9600
C1—C21.545 (3)C11—H11A0.9600
C1—H10.9800C11—H11B0.9600
C2—C101.521 (4)C11—H11C0.9600
C2—C31.522 (4)C12—C131.496 (4)
C2—C111.553 (4)C12—H12A0.9700
C3—C41.525 (4)C12—H12B0.9700
C4—C91.526 (4)C13—C141.343 (4)
C4—C81.545 (4)C14—C151.462 (4)
C4—C51.550 (4)C16—C171.465 (5)
C5—C61.479 (4)C16—H16A0.9700
C5—H5A0.9700C16—H16B0.9700
C5—H5B0.9700C17—H17A0.9600
C6—C71.505 (4)C17—H17B0.9600
C6—H6A0.9700C17—H17C0.9600
C13—O2—H2O102 (2)C4—C8—H8110.7
C14—O3—C7113.1 (2)C4—C9—H9A109.5
C15—O5—C16116.3 (2)C4—C9—H9B109.5
C12—C1—C8112.7 (2)H9A—C9—H9B109.5
C12—C1—C2116.1 (2)C4—C9—H9C109.5
C8—C1—C2105.5 (2)H9A—C9—H9C109.5
C12—C1—H1107.4H9B—C9—H9C109.5
C8—C1—H1107.4C2—C10—H10A109.5
C2—C1—H1107.4C2—C10—H10B109.5
C10—C2—C3112.0 (2)H10A—C10—H10B109.5
C10—C2—C1113.9 (2)C2—C10—H10C109.5
C3—C2—C1101.9 (2)H10A—C10—H10C109.5
C10—C2—C11110.0 (3)H10B—C10—H10C109.5
C3—C2—C11105.7 (2)C2—C11—H11A109.5
C1—C2—C11112.8 (2)C2—C11—H11B109.5
O1—C3—C2124.6 (3)H11A—C11—H11B109.5
O1—C3—C4124.6 (3)C2—C11—H11C109.5
C2—C3—C4110.8 (2)H11A—C11—H11C109.5
C3—C4—C9111.8 (2)H11B—C11—H11C109.5
C3—C4—C8104.3 (2)C13—C12—C1116.0 (2)
C9—C4—C8115.3 (2)C13—C12—H12A108.3
C3—C4—C5110.8 (2)C1—C12—H12A108.3
C9—C4—C5112.3 (3)C13—C12—H12B108.3
C8—C4—C5101.6 (2)C1—C12—H12B108.3
C6—C5—C4106.8 (3)H12A—C12—H12B107.4
C6—C5—H5A110.4C14—C13—O2121.7 (3)
C4—C5—H5A110.4C14—C13—C12127.0 (3)
C6—C5—H5B110.4O2—C13—C12111.3 (3)
C4—C5—H5B110.4C13—C14—O3122.2 (2)
H5A—C5—H5B108.6C13—C14—C15120.8 (3)
C5—C6—C7106.8 (3)O3—C14—C15117.0 (3)
C5—C6—H6A110.4O4—C15—O5123.2 (3)
C7—C6—H6A110.4O4—C15—C14122.9 (3)
C5—C6—H6B110.4O5—C15—C14114.0 (3)
C7—C6—H6B110.4C17—C16—O5107.9 (3)
H6A—C6—H6B108.6C17—C16—H16A110.1
O3—C7—C6109.2 (3)O5—C16—H16A110.1
O3—C7—C8111.2 (2)C17—C16—H16B110.1
C6—C7—C8107.1 (2)O5—C16—H16B110.1
O3—C7—H7109.8H16A—C16—H16B108.4
C6—C7—H7109.8C16—C17—H17A109.5
C8—C7—H7109.8C16—C17—H17B109.5
C1—C8—C7113.5 (2)H17A—C17—H17B109.5
C1—C8—C4104.8 (2)C16—C17—H17C109.5
C7—C8—C4106.3 (2)H17A—C17—H17C109.5
C1—C8—H8110.7H17B—C17—H17C109.5
C7—C8—H8110.7
C12—C1—C2—C1079.9 (3)C2—C1—C8—C435.4 (3)
C8—C1—C2—C10−154.5 (2)O3—C7—C8—C116.3 (3)
C12—C1—C2—C3−159.2 (2)C6—C7—C8—C1−103.0 (3)
C8—C1—C2—C3−33.6 (3)O3—C7—C8—C4131.0 (2)
C12—C1—C2—C11−46.3 (3)C6—C7—C8—C411.7 (3)
C8—C1—C2—C1179.3 (3)C3—C4—C8—C1−22.2 (3)
C10—C2—C3—O1−38.1 (4)C9—C4—C8—C1−145.2 (3)
C1—C2—C3—O1−160.2 (3)C5—C4—C8—C193.0 (3)
C11—C2—C3—O181.8 (4)C3—C4—C8—C7−142.7 (2)
C10—C2—C3—C4142.1 (3)C9—C4—C8—C794.4 (3)
C1—C2—C3—C420.0 (3)C5—C4—C8—C7−27.4 (3)
C11—C2—C3—C4−98.1 (3)C8—C1—C12—C1349.8 (3)
O1—C3—C4—C9−53.5 (4)C2—C1—C12—C13171.6 (2)
C2—C3—C4—C9126.4 (3)C1—C12—C13—C148.5 (4)
O1—C3—C4—C8−178.7 (3)C1—C12—C13—O2−169.0 (2)
C2—C3—C4—C81.1 (3)O2—C13—C14—O3−177.2 (2)
O1—C3—C4—C572.7 (4)C12—C13—C14—O35.5 (4)
C2—C3—C4—C5−107.5 (3)O2—C13—C14—C151.5 (4)
C3—C4—C5—C6144.6 (3)C12—C13—C14—C15−175.8 (3)
C9—C4—C5—C6−89.5 (3)C7—O3—C14—C13−75.6 (3)
C8—C4—C5—C634.3 (3)C7—O3—C14—C15105.7 (3)
C4—C5—C6—C7−28.1 (4)C16—O5—C15—O41.9 (4)
C14—O3—C7—C6−172.9 (2)C16—O5—C15—C14−178.6 (2)
C14—O3—C7—C869.1 (3)C13—C14—C15—O4−6.2 (4)
C5—C6—C7—O3−110.5 (3)O3—C14—C15—O4172.5 (2)
C5—C6—C7—C810.0 (4)C13—C14—C15—O5174.3 (3)
C12—C1—C8—C7−81.4 (3)O3—C14—C15—O5−7.0 (4)
C2—C1—C8—C7151.0 (2)C15—O5—C16—C17167.3 (3)
C12—C1—C8—C4163.1 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2O···O40.93 (3)1.69 (3)2.565 (4)155 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2O⋯O40.93 (3)1.69 (3)2.565 (4)155 (3)
  9 in total

1.  An Enantioselective Approach to the Securinega Alkaloids: The Total Synthesis of (+)-Norsecurinine and (+)-Allonorsecurinine.

Authors:  Matthew R Medeiros; John L Wood
Journal:  Tetrahedron       Date:  2010-06-26       Impact factor: 2.457

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Catalytic carbene insertion into C-H bonds.

Authors:  Michael P Doyle; Richard Duffy; Maxim Ratnikov; Lei Zhou
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

4.  Welwitindolinone C synthetic studies. Construction of the welwitindolinone carbon skeleton via a transannular nitrone cycloaddition.

Authors:  David B Freeman; Alexandra A Holubec; Matthew W Weiss; Julie A Dixon; Akio Kakefuda; Masami Ohtsuka; Munenori Inoue; Rishi G Vaswani; Hidenori Ohki; Brian D Doan; Sarah E Reisman; Brian M Stoltz; Joshua J Day; Ran N Tao; Noah A Dieterich; John L Wood
Journal:  Tetrahedron       Date:  2010-08-14       Impact factor: 2.457

Review 5.  Guiding principles for site selective and stereoselective intermolecular C-H functionalization by donor/acceptor rhodium carbenes.

Authors:  Huw M L Davies; Daniel Morton
Journal:  Chem Soc Rev       Date:  2011-03-01       Impact factor: 54.564

6.  Total synthesis of (-)-Penifulvin A, an insecticide with a dioxafenestrane skeleton.

Authors:  Tanja Gaich; Johann Mulzer
Journal:  J Am Chem Soc       Date:  2009-01-21       Impact factor: 15.419

7.  Penifulvin A: a sesquiterpenoid-derived metabolite containing a novel dioxa[5,5,5,6]fenestrane ring system from a fungicolous isolate of Penicillium griseofulvum.

Authors:  Sang Hee Shim; Dale C Swenson; James B Gloer; Patrick F Dowd; Donald T Wicklow
Journal:  Org Lett       Date:  2006-03-16       Impact factor: 6.005

8.  Convenient method for the functionalization of the 4- and 6-positions of the androgen skeleton.

Authors:  Daniel Morton; Allison R Dick; Debashis Ghosh; Huw M L Davies
Journal:  Chem Commun (Camb)       Date:  2012-05-09       Impact factor: 6.222

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  9 in total

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