Literature DB >> 23476216

Dabigatran etexilate tetra-hydrate.

Hong-Qiang Liu1, Wei-Guang Zhang, Zhi-Qiang Cai, Wei-Ren Xu, Xiu-Ping Shen.   

Abstract

In the title compound, C34H41N7O5·4H2O (systematic name: ethyl 3-{[2-({4-[(Z)-amino-(hexyl-oxycarbonyl-imino)-meth-yl]anilino}meth-yl)-1-meth-yl-n class="Chemical">benzimidazole-5-carbon-yl]pyridin-2-yl-amino}-propano-ate tetra-hydrate), the benzene and pyridine rings form dihedral angles of 5.4 (1) and 43.8 (1)°, respectively, with the benzimidazole mean plane. The terminal butyl group is disordered over two conformations in a 0.756 (10):0.244 (10) ratio. There is an intramolecular N-H⋯O hydrogen bond present. In the crystal, the water mol-ecules are involved in the formation of O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds, which link the components into layers parallel to the ab plane.

Entities:  

Year:  2012        PMID: 23476216      PMCID: PMC3588980          DOI: 10.1107/S1600536812046673

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the anti­coagulant drug dabigatran etexil­ate, see: Nagarakanti & Ellis (2012 ▶); Van Ryn et al. (2010 ▶).

Experimental

Crystal data

C34H41N7O5·4H2O M = 699.80 Triclinic, a = 9.1140 (13) Å b = 10.9700 (14) Å c = 18.3830 (17) Å α = 88.51 (1)° β = 85.455 (9)° γ = 83.034 (12)° V = 1818.4 (4) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 113 K 0.22 × 0.20 × 0.18 mm

Data collection

Rigaku Saturn 724 CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2009 ▶) T min = 0.980, T max = 0.983 23569 measured reflections 8627 independent reflections 5187 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.103 S = 0.96 8627 reflections 513 parameters 40 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2009 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812046673/cv5357sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046673/cv5357Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812046673/cv5357Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C34H41N7O5·4H2OZ = 2
Mr = 699.80F(000) = 748
Triclinic, P1Dx = 1.278 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.1140 (13) ÅCell parameters from 6648 reflections
b = 10.9700 (14) Åθ = 1.9–27.9°
c = 18.3830 (17) ŵ = 0.09 mm1
α = 88.51 (1)°T = 113 K
β = 85.455 (9)°Prism, colourless
γ = 83.034 (12)°0.22 × 0.20 × 0.18 mm
V = 1818.4 (4) Å3
Rigaku Saturn 724 CCD area-detector diffractometer8627 independent reflections
Radiation source: rotating anode5187 reflections with I > 2σ(I)
Multilayer monochromatorRint = 0.036
Detector resolution: 14.222 pixels mm-1θmax = 27.9°, θmin = 1.9°
ω and φ scansh = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2009)k = −14→14
Tmin = 0.980, Tmax = 0.983l = −24→24
23569 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.103w = 1/[σ2(Fo2) + (0.0522P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max = 0.003
8627 reflectionsΔρmax = 0.42 e Å3
513 parametersΔρmin = −0.37 e Å3
40 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0080 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O1−0.07658 (10)0.08373 (9)0.62025 (5)0.0267 (2)
O20.17115 (10)0.05322 (9)0.62048 (5)0.0270 (2)
O30.42751 (11)1.14550 (9)1.09974 (5)0.0287 (2)
O40.04154 (11)1.24401 (10)1.31026 (6)0.0381 (3)
O50.17441 (10)1.34627 (9)1.37972 (5)0.0279 (2)
O60.39167 (12)0.67342 (10)0.95328 (6)0.0275 (2)
O70.50826 (11)0.30578 (10)0.79165 (6)0.0295 (3)
O80.44104 (13)0.41395 (12)0.92879 (7)0.0384 (3)
O90.35290 (12)0.12591 (10)0.74559 (6)0.0312 (3)
N1−0.20452 (13)0.22911 (11)0.72416 (7)0.0235 (3)
N20.05361 (12)0.18903 (10)0.69881 (6)0.0203 (3)
N30.03535 (13)0.61137 (11)0.93156 (7)0.0240 (3)
N4−0.10668 (11)0.85922 (10)1.05945 (6)0.0183 (2)
N50.12518 (11)0.79155 (10)1.01673 (6)0.0192 (2)
N60.35894 (11)1.13593 (10)1.22064 (6)0.0189 (2)
N70.60387 (12)1.13966 (10)1.25116 (6)0.0224 (3)
C1−0.06690 (14)0.24665 (12)0.73487 (7)0.0181 (3)
C2−0.04330 (14)0.33887 (11)0.78872 (7)0.0176 (3)
C30.09907 (14)0.37209 (12)0.79453 (7)0.0203 (3)
H30.18040.33180.76530.024*
C40.12344 (14)0.46122 (12)0.84135 (7)0.0212 (3)
H40.22120.48140.84430.025*
C50.00592 (14)0.52322 (12)0.88503 (7)0.0187 (3)
C6−0.13680 (14)0.49039 (12)0.88028 (7)0.0215 (3)
H6−0.21800.53070.90950.026*
C7−0.15985 (14)0.39941 (12)0.83304 (7)0.0213 (3)
H7−0.25710.37770.83070.026*
C80.03660 (15)0.10830 (12)0.64545 (7)0.0206 (3)
C90.17173 (15)−0.03820 (13)0.56542 (8)0.0270 (3)
H9A0.1270−0.00050.52160.032*
H9B0.1133−0.10430.58420.032*
C100.33034 (16)−0.09023 (14)0.54624 (8)0.0337 (4)
H10A0.3766−0.11340.59050.040*0.756 (10)
H10B0.3820−0.02750.52220.040*0.756 (10)
H10C0.3709−0.12810.58910.040*0.244 (10)
H10D0.3863−0.02400.53120.040*0.244 (10)
C110.3481 (5)−0.1909 (4)0.4920 (3)0.0363 (10)0.756 (10)
H11A0.3006−0.15950.44750.044*0.756 (10)
H11B0.2939−0.25850.51250.044*0.756 (10)
C120.5069 (4)−0.2433 (3)0.4700 (2)0.0317 (8)0.756 (10)
H12A0.5580−0.26570.51480.038*0.756 (10)
H12B0.5578−0.17820.44400.038*0.756 (10)
C130.5237 (4)−0.3553 (4)0.4216 (2)0.0413 (9)0.756 (10)
H13A0.4765−0.42240.44760.050*0.756 (10)
H13B0.4724−0.33450.37660.050*0.756 (10)
C140.6862 (7)−0.3987 (8)0.4014 (5)0.0448 (5)0.756 (10)
H14A0.7345−0.33060.37880.067*0.756 (10)
H14B0.6941−0.46630.36690.067*0.756 (10)
H14C0.7347−0.42730.44540.067*0.756 (10)
C11'0.3396 (14)−0.2118 (12)0.5051 (9)0.0363 (10)0.244 (10)
H11C0.2894−0.27200.53600.044*0.244 (10)
H11D0.2871−0.19730.46000.044*0.244 (10)
C12'0.4992 (14)−0.2644 (12)0.4854 (7)0.0317 (8)0.244 (10)
H12C0.5631−0.19900.49090.038*0.244 (10)
H12D0.5270−0.33040.52130.038*0.244 (10)
C13'0.5337 (14)−0.3157 (13)0.4106 (6)0.0413 (9)0.244 (10)
H13C0.5348−0.24700.37460.050*0.244 (10)
H13D0.4542−0.36460.39930.050*0.244 (10)
C14'0.683 (2)−0.397 (2)0.4025 (14)0.0448 (5)0.244 (10)
H14D0.7121−0.41040.35060.067*0.244 (10)
H14E0.6737−0.47580.42740.067*0.244 (10)
H14F0.7582−0.35590.42430.067*0.244 (10)
C15−0.08019 (14)0.68470 (12)0.97473 (7)0.0200 (3)
H15A−0.13290.63081.00900.024*
H15B−0.15280.72680.94230.024*
C16−0.01657 (14)0.77783 (12)1.01663 (7)0.0183 (3)
C17−0.01616 (14)0.93177 (12)1.09055 (7)0.0179 (3)
C180.12911 (14)0.88895 (11)1.06367 (7)0.0174 (3)
C190.24838 (14)0.94473 (12)1.08399 (7)0.0194 (3)
H190.34690.91771.06550.023*
C200.21816 (14)1.04163 (12)1.13237 (7)0.0194 (3)
C210.07151 (15)1.08313 (12)1.15878 (7)0.0210 (3)
H210.05451.14961.19170.025*
C22−0.04793 (15)1.02964 (12)1.13805 (7)0.0209 (3)
H22−0.14681.05831.15540.025*
C23−0.26885 (14)0.86874 (13)1.07118 (8)0.0249 (3)
H23A−0.31030.84801.02610.030*
H23B−0.30810.95291.08480.030*
H23C−0.29640.81171.11040.030*
C240.34361 (14)1.10995 (12)1.14951 (7)0.0201 (3)
C250.47803 (14)1.20529 (12)1.23399 (7)0.0189 (3)
C260.45451 (15)1.33195 (12)1.23265 (8)0.0236 (3)
H260.36271.37451.22000.028*
C270.56949 (15)1.39514 (13)1.25036 (8)0.0267 (3)
H270.55771.48241.25040.032*
C280.70211 (15)1.32896 (13)1.26806 (8)0.0259 (3)
H280.78281.37001.28000.031*
C290.71403 (15)1.20250 (13)1.26791 (7)0.0244 (3)
H290.80471.15751.28030.029*
C300.30221 (15)1.06478 (12)1.28412 (7)0.0219 (3)
H30A0.37660.99401.29410.026*
H30B0.21051.03221.27220.026*
C310.26932 (15)1.14206 (13)1.35196 (7)0.0244 (3)
H31A0.23901.08911.39350.029*
H31B0.36111.17491.36360.029*
C320.14955 (15)1.24727 (14)1.34383 (7)0.0250 (3)
C330.06161 (17)1.45193 (14)1.37596 (9)0.0335 (4)
H33A−0.03441.43151.39900.040*
H33B0.04831.47641.32450.040*
C340.11330 (19)1.55442 (14)1.41568 (9)0.0388 (4)
H34A0.12761.52861.46630.047*
H34B0.03881.62671.41500.047*
H34C0.20731.57491.39170.047*
H1−0.2851 (19)0.2647 (16)0.7500 (10)0.050 (5)*
H2−0.2158 (17)0.1769 (14)0.6885 (9)0.033 (4)*
H50.1212 (17)0.6292 (14)0.9290 (8)0.034 (5)*
H80.307 (2)0.7148 (16)0.9744 (10)0.055 (6)*
H160.442 (2)0.7259 (17)0.9336 (10)0.057 (6)*
H170.482 (2)0.3315 (17)0.8352 (11)0.059 (6)*
H180.455 (2)0.2495 (17)0.7780 (10)0.053 (6)*
H200.263 (3)0.145 (2)0.7243 (12)0.085 (7)*
H240.367 (2)0.0486 (17)0.7441 (10)0.051 (6)*
H250.431 (2)0.4908 (19)0.9311 (11)0.068 (7)*
H320.502 (2)0.3853 (17)0.9665 (11)0.061 (6)*
U11U22U33U12U13U23
O10.0211 (5)0.0330 (6)0.0271 (5)−0.0033 (4)−0.0044 (4)−0.0115 (4)
O20.0199 (5)0.0321 (6)0.0289 (5)−0.0010 (4)−0.0004 (4)−0.0144 (5)
O30.0310 (6)0.0362 (6)0.0221 (5)−0.0181 (5)0.0004 (4)−0.0038 (4)
O40.0240 (6)0.0475 (7)0.0435 (7)0.0025 (5)−0.0132 (5)−0.0163 (6)
O50.0264 (5)0.0280 (6)0.0297 (6)−0.0008 (4)−0.0064 (4)−0.0042 (5)
O60.0232 (6)0.0238 (6)0.0345 (6)−0.0029 (5)0.0040 (5)−0.0018 (5)
O70.0228 (5)0.0303 (6)0.0367 (7)−0.0089 (5)0.0025 (5)−0.0116 (5)
O80.0460 (7)0.0293 (7)0.0413 (7)0.0022 (6)−0.0193 (6)−0.0113 (6)
O90.0274 (6)0.0215 (6)0.0468 (7)−0.0018 (5)−0.0143 (5)−0.0088 (5)
N10.0188 (6)0.0264 (7)0.0262 (7)−0.0043 (5)−0.0017 (5)−0.0116 (6)
N20.0185 (6)0.0215 (6)0.0212 (6)−0.0016 (5)−0.0024 (5)−0.0059 (5)
N30.0166 (6)0.0257 (7)0.0309 (7)−0.0055 (5)−0.0013 (5)−0.0107 (5)
N40.0158 (5)0.0206 (6)0.0196 (6)−0.0059 (5)−0.0013 (4)−0.0028 (5)
N50.0189 (6)0.0190 (6)0.0205 (6)−0.0036 (5)−0.0030 (5)−0.0022 (5)
N60.0169 (6)0.0213 (6)0.0200 (6)−0.0065 (5)−0.0029 (4)−0.0028 (5)
N70.0189 (6)0.0220 (6)0.0268 (6)−0.0024 (5)−0.0039 (5)−0.0039 (5)
C10.0186 (7)0.0169 (7)0.0190 (7)−0.0029 (5)−0.0023 (5)0.0010 (5)
C20.0191 (7)0.0160 (6)0.0180 (6)−0.0027 (5)−0.0033 (5)0.0003 (5)
C30.0168 (6)0.0220 (7)0.0213 (7)0.0005 (6)−0.0012 (5)−0.0027 (6)
C40.0151 (6)0.0236 (7)0.0258 (7)−0.0052 (6)−0.0032 (5)−0.0016 (6)
C50.0206 (7)0.0167 (7)0.0195 (7)−0.0034 (5)−0.0042 (5)−0.0020 (5)
C60.0179 (7)0.0214 (7)0.0248 (7)−0.0014 (6)0.0004 (6)−0.0069 (6)
C70.0170 (7)0.0218 (7)0.0261 (7)−0.0054 (6)−0.0026 (6)−0.0028 (6)
C80.0204 (7)0.0207 (7)0.0207 (7)−0.0032 (6)0.0005 (6)−0.0012 (6)
C90.0268 (8)0.0300 (8)0.0240 (7)0.0000 (6)−0.0027 (6)−0.0123 (6)
C100.0250 (8)0.0403 (9)0.0347 (9)0.0004 (7)0.0018 (7)−0.0148 (7)
C110.0340 (10)0.0424 (17)0.031 (2)0.0088 (11)−0.0096 (11)−0.0134 (16)
C120.0310 (10)0.0351 (15)0.0277 (18)0.0004 (11)−0.0002 (11)−0.0059 (12)
C130.0365 (11)0.039 (2)0.0472 (16)0.0086 (16)−0.0096 (10)−0.0161 (16)
C140.0372 (10)0.0537 (13)0.0410 (11)0.0068 (8)−0.0023 (8)−0.0127 (9)
C11'0.0340 (10)0.0424 (17)0.031 (2)0.0088 (11)−0.0096 (11)−0.0134 (16)
C12'0.0310 (10)0.0351 (15)0.0277 (18)0.0004 (11)−0.0002 (11)−0.0059 (12)
C13'0.0365 (11)0.039 (2)0.0472 (16)0.0086 (16)−0.0096 (10)−0.0161 (16)
C14'0.0372 (10)0.0537 (13)0.0410 (11)0.0068 (8)−0.0023 (8)−0.0127 (9)
C150.0202 (7)0.0187 (7)0.0221 (7)−0.0051 (6)−0.0025 (5)−0.0027 (6)
C160.0203 (7)0.0172 (7)0.0179 (6)−0.0036 (6)−0.0024 (5)0.0007 (5)
C170.0186 (7)0.0179 (7)0.0182 (6)−0.0059 (5)−0.0031 (5)0.0006 (5)
C180.0186 (6)0.0159 (6)0.0179 (6)−0.0024 (5)−0.0020 (5)−0.0006 (5)
C190.0165 (6)0.0208 (7)0.0213 (7)−0.0031 (5)−0.0029 (5)0.0002 (6)
C200.0215 (7)0.0190 (7)0.0189 (7)−0.0063 (6)−0.0043 (5)0.0012 (5)
C210.0240 (7)0.0194 (7)0.0204 (7)−0.0041 (6)−0.0022 (6)−0.0044 (6)
C220.0174 (7)0.0237 (7)0.0218 (7)−0.0030 (6)−0.0010 (5)−0.0042 (6)
C230.0173 (7)0.0318 (8)0.0269 (8)−0.0078 (6)0.0000 (6)−0.0059 (6)
C240.0184 (7)0.0197 (7)0.0225 (7)−0.0027 (6)−0.0020 (5)−0.0031 (6)
C250.0163 (6)0.0223 (7)0.0187 (7)−0.0040 (6)−0.0019 (5)−0.0041 (6)
C260.0209 (7)0.0221 (7)0.0277 (8)−0.0009 (6)−0.0041 (6)−0.0007 (6)
C270.0283 (8)0.0196 (7)0.0332 (8)−0.0063 (6)−0.0031 (6)−0.0028 (6)
C280.0221 (7)0.0271 (8)0.0303 (8)−0.0080 (6)−0.0044 (6)−0.0057 (6)
C290.0176 (7)0.0284 (8)0.0281 (8)−0.0037 (6)−0.0051 (6)−0.0040 (6)
C300.0203 (7)0.0235 (7)0.0229 (7)−0.0060 (6)−0.0028 (6)−0.0001 (6)
C310.0211 (7)0.0318 (8)0.0213 (7)−0.0061 (6)−0.0042 (6)−0.0006 (6)
C320.0203 (7)0.0345 (8)0.0209 (7)−0.0067 (6)−0.0001 (6)−0.0049 (6)
C330.0331 (9)0.0330 (9)0.0335 (9)0.0036 (7)−0.0078 (7)−0.0015 (7)
C340.0444 (10)0.0295 (9)0.0431 (10)−0.0031 (8)−0.0084 (8)−0.0015 (8)
O1—C81.2251 (15)C12—H12A0.9900
O2—C81.3510 (15)C12—H12B0.9900
O2—C91.4425 (15)C13—C141.520 (5)
O3—C241.2316 (16)C13—H13A0.9900
O4—C321.2071 (16)C13—H13B0.9900
O5—C321.3367 (16)C14—H14A0.9800
O5—C331.4571 (17)C14—H14B0.9800
O6—H80.912 (19)C14—H14C0.9800
O6—H160.84 (2)C11'—C12'1.519 (9)
O7—H170.861 (19)C11'—H11C0.9900
O7—H180.881 (18)C11'—H11D0.9900
O8—H250.84 (2)C12'—C13'1.495 (9)
O8—H320.94 (2)C12'—H12C0.9900
O9—H200.93 (2)C12'—H12D0.9900
O9—H240.844 (19)C13'—C14'1.530 (9)
N1—C11.3223 (16)C13'—H13C0.9900
N1—H10.896 (17)C13'—H13D0.9900
N1—H20.902 (15)C14'—H14D0.9800
N2—C11.3354 (16)C14'—H14E0.9800
N2—C81.3688 (16)C14'—H14F0.9800
N3—C51.3713 (16)C15—C161.4928 (17)
N3—C151.4426 (17)C15—H15A0.9900
N3—H50.826 (15)C15—H15B0.9900
N4—C161.3593 (16)C17—C221.3901 (17)
N4—C171.3780 (15)C17—C181.4054 (17)
N4—C231.4680 (16)C18—C191.3904 (17)
N5—C161.3188 (16)C19—C201.3914 (18)
N5—C181.3963 (15)C19—H190.9500
N6—C241.3669 (16)C20—C211.4109 (18)
N6—C251.4386 (16)C20—C241.4985 (17)
N6—C301.4810 (17)C21—C221.3809 (17)
N7—C251.3337 (17)C21—H210.9500
N7—C291.3438 (16)C22—H220.9500
C1—C21.4794 (17)C23—H23A0.9800
C2—C71.3975 (18)C23—H23B0.9800
C2—C31.4023 (17)C23—H23C0.9800
C3—C41.3685 (17)C25—C261.3798 (18)
C3—H30.9500C26—C271.3881 (18)
C4—C51.4036 (18)C26—H260.9500
C4—H40.9500C27—C281.390 (2)
C5—C61.4010 (18)C27—H270.9500
C6—C71.3854 (17)C28—C291.3784 (19)
C6—H60.9500C28—H280.9500
C7—H70.9500C29—H290.9500
C9—C101.5064 (19)C30—C311.5159 (18)
C9—H9A0.9900C30—H30A0.9900
C9—H9B0.9900C30—H30B0.9900
C10—C111.494 (3)C31—C321.502 (2)
C10—C11'1.540 (9)C31—H31A0.9900
C10—H10A0.9601C31—H31B0.9900
C10—H10B0.9600C33—C341.498 (2)
C10—H10C0.9601C33—H33A0.9900
C10—H10D0.9601C33—H33B0.9900
C11—C121.519 (3)C34—H34A0.9800
C11—H11A0.9900C34—H34B0.9800
C11—H11B0.9900C34—H34C0.9800
C12—C131.522 (4)
C8—O2—C9116.08 (10)C13'—C12'—C11'116.6 (9)
C32—O5—C33115.53 (11)C13'—C12'—H12C108.1
H8—O6—H16107.3 (16)C11'—C12'—H12C108.1
H17—O7—H18113.2 (17)C13'—C12'—H12D108.1
H25—O8—H32105.7 (17)C11'—C12'—H12D108.1
H20—O9—H24103.2 (16)H12C—C12'—H12D107.3
C1—N1—H1124.5 (10)C12'—C13'—C14'112.8 (9)
C1—N1—H2116.5 (10)C12'—C13'—H13C109.0
H1—N1—H2119.1 (14)C14'—C13'—H13C109.0
C1—N2—C8119.06 (11)C12'—C13'—H13D109.0
C5—N3—C15122.41 (11)C14'—C13'—H13D109.0
C5—N3—H5116.9 (10)H13C—C13'—H13D107.8
C15—N3—H5120.0 (10)C13'—C14'—H14D109.5
C16—N4—C17106.66 (10)C13'—C14'—H14E109.5
C16—N4—C23127.23 (11)H14D—C14'—H14E109.5
C17—N4—C23126.11 (11)C13'—C14'—H14F109.5
C16—N5—C18104.75 (10)H14D—C14'—H14F109.5
C24—N6—C25116.67 (10)H14E—C14'—H14F109.5
C24—N6—C30124.33 (10)N3—C15—C16110.61 (11)
C25—N6—C30115.31 (10)N3—C15—H15A109.5
C25—N7—C29117.00 (12)C16—C15—H15A109.5
N1—C1—N2124.48 (12)N3—C15—H15B109.5
N1—C1—C2118.39 (12)C16—C15—H15B109.5
N2—C1—C2117.10 (11)H15A—C15—H15B108.1
C7—C2—C3117.59 (11)N5—C16—N4113.56 (11)
C7—C2—C1122.34 (11)N5—C16—C15125.99 (12)
C3—C2—C1120.02 (11)N4—C16—C15120.45 (11)
C4—C3—C2121.45 (12)N4—C17—C22131.62 (12)
C4—C3—H3119.3N4—C17—C18105.80 (10)
C2—C3—H3119.3C22—C17—C18122.57 (11)
C3—C4—C5120.90 (12)C19—C18—N5130.40 (12)
C3—C4—H4119.6C19—C18—C17120.36 (11)
C5—C4—H4119.6N5—C18—C17109.23 (10)
N3—C5—C6122.64 (12)C18—C19—C20117.59 (12)
N3—C5—C4119.02 (12)C18—C19—H19121.2
C6—C5—C4118.33 (11)C20—C19—H19121.2
C7—C6—C5120.21 (12)C19—C20—C21121.15 (11)
C7—C6—H6119.9C19—C20—C24118.17 (12)
C5—C6—H6119.9C21—C20—C24120.35 (11)
C6—C7—C2121.51 (12)C22—C21—C20121.72 (12)
C6—C7—H7119.2C22—C21—H21119.1
C2—C7—H7119.2C20—C21—H21119.1
O1—C8—O2120.94 (11)C21—C22—C17116.59 (12)
O1—C8—N2129.76 (12)C21—C22—H22121.7
O2—C8—N2109.30 (11)C17—C22—H22121.7
O2—C9—C10107.93 (11)N4—C23—H23A109.5
O2—C9—H9A110.1N4—C23—H23B109.5
C10—C9—H9A110.1H23A—C23—H23B109.5
O2—C9—H9B110.1N4—C23—H23C109.5
C10—C9—H9B110.1H23A—C23—H23C109.5
H9A—C9—H9B108.4H23B—C23—H23C109.5
C11—C10—C9114.1 (2)O3—C24—N6121.11 (11)
C11—C10—C11'12.7 (8)O3—C24—C20120.02 (12)
C9—C10—C11'111.3 (5)N6—C24—C20118.82 (11)
C11—C10—H10A113.1N7—C25—C26124.33 (12)
C9—C10—H10A108.8N7—C25—N6115.85 (11)
C11'—C10—H10A103.9C26—C25—N6119.71 (12)
C11—C10—H10B103.7C25—C26—C27117.78 (13)
C9—C10—H10B108.9C25—C26—H26121.1
C11'—C10—H10B115.7C27—C26—H26121.1
H10A—C10—H10B107.9C26—C27—C28119.05 (13)
C11—C10—H10C104.4C26—C27—H27120.5
C9—C10—H10C108.9C28—C27—H27120.5
C11'—C10—H10C94.3C29—C28—C27118.55 (13)
H10A—C10—H10C10.7C29—C28—H28120.7
H10B—C10—H10C117.0C27—C28—H28120.7
C11—C10—H10D112.7N7—C29—C28123.29 (13)
C9—C10—H10D108.7N7—C29—H29118.4
C11'—C10—H10D124.1C28—C29—H29118.4
H10A—C10—H10D98.3N6—C30—C31112.12 (11)
H10B—C10—H10D10.7N6—C30—H30A109.2
H10C—C10—H10D107.9C31—C30—H30A109.2
C10—C11—C12115.4 (3)N6—C30—H30B109.2
C10—C11—H11A108.4C31—C30—H30B109.2
C12—C11—H11A108.4H30A—C30—H30B107.9
C10—C11—H11B108.4C32—C31—C30113.14 (11)
C12—C11—H11B108.4C32—C31—H31A109.0
H11A—C11—H11B107.5C30—C31—H31A109.0
C11—C12—C13115.1 (3)C32—C31—H31B109.0
C11—C12—H12A108.5C30—C31—H31B109.0
C13—C12—H12A108.5H31A—C31—H31B107.8
C11—C12—H12B108.5O4—C32—O5123.06 (14)
C13—C12—H12B108.5O4—C32—C31124.96 (13)
H12A—C12—H12B107.5O5—C32—C31111.97 (11)
C14—C13—C12110.9 (4)O5—C33—C34107.38 (12)
C14—C13—H13A109.5O5—C33—H33A110.2
C12—C13—H13A109.5C34—C33—H33A110.2
C14—C13—H13B109.5O5—C33—H33B110.2
C12—C13—H13B109.5C34—C33—H33B110.2
H13A—C13—H13B108.0H33A—C33—H33B108.5
C12'—C11'—C10111.6 (9)C33—C34—H34A109.5
C12'—C11'—H11C109.3C33—C34—H34B109.5
C10—C11'—H11C109.3H34A—C34—H34B109.5
C12'—C11'—H11D109.3C33—C34—H34C109.5
C10—C11'—H11D109.3H34A—C34—H34C109.5
H11C—C11'—H11D108.0H34B—C34—H34C109.5
C8—N2—C1—N11.9 (2)C23—N4—C17—C18179.88 (12)
C8—N2—C1—C2−176.19 (12)C16—N5—C18—C19−179.11 (14)
N1—C1—C2—C76.0 (2)C16—N5—C18—C17−0.32 (14)
N2—C1—C2—C7−175.86 (12)N4—C17—C18—C19179.02 (12)
N1—C1—C2—C3−171.36 (12)C22—C17—C18—C19−0.2 (2)
N2—C1—C2—C36.82 (19)N4—C17—C18—N50.08 (14)
C7—C2—C3—C4−0.6 (2)C22—C17—C18—N5−179.18 (12)
C1—C2—C3—C4176.89 (13)N5—C18—C19—C20179.84 (13)
C2—C3—C4—C5−0.4 (2)C17—C18—C19—C201.16 (19)
C15—N3—C5—C6−5.5 (2)C18—C19—C20—C21−1.1 (2)
C15—N3—C5—C4175.89 (12)C18—C19—C20—C24−174.58 (12)
C3—C4—C5—N3179.58 (13)C19—C20—C21—C220.1 (2)
C3—C4—C5—C60.9 (2)C24—C20—C21—C22173.45 (13)
N3—C5—C6—C7−179.07 (13)C20—C21—C22—C170.8 (2)
C4—C5—C6—C7−0.4 (2)N4—C17—C22—C21−179.80 (13)
C5—C6—C7—C2−0.5 (2)C18—C17—C22—C21−0.7 (2)
C3—C2—C7—C61.0 (2)C25—N6—C24—O3−0.57 (19)
C1—C2—C7—C6−176.37 (13)C30—N6—C24—O3−157.83 (13)
C9—O2—C8—O1−2.42 (19)C25—N6—C24—C20−177.95 (11)
C9—O2—C8—N2177.92 (11)C30—N6—C24—C2024.79 (19)
C1—N2—C8—O15.4 (2)C19—C20—C24—O348.24 (19)
C1—N2—C8—O2−174.95 (11)C21—C20—C24—O3−125.29 (15)
C8—O2—C9—C10−178.74 (12)C19—C20—C24—N6−134.35 (13)
O2—C9—C10—C11177.3 (3)C21—C20—C24—N652.12 (18)
O2—C9—C10—C11'163.8 (8)C29—N7—C25—C26−0.2 (2)
C9—C10—C11—C12178.5 (2)C29—N7—C25—N6−176.35 (11)
C11'—C10—C11—C12−101 (3)C24—N6—C25—N7−95.43 (15)
C10—C11—C12—C13173.3 (5)C30—N6—C25—N763.90 (15)
C11—C12—C13—C14178.7 (5)C24—N6—C25—C2688.23 (15)
C11—C10—C11'—C12'75 (3)C30—N6—C25—C26−112.44 (14)
C9—C10—C11'—C12'179.8 (9)N7—C25—C26—C270.0 (2)
C10—C11'—C12'—C13'−137.5 (15)N6—C25—C26—C27176.00 (12)
C11'—C12'—C13'—C14'−164.4 (16)C25—C26—C27—C280.4 (2)
C5—N3—C15—C16−176.57 (12)C26—C27—C28—C29−0.5 (2)
C18—N5—C16—N40.46 (15)C25—N7—C29—C280.0 (2)
C18—N5—C16—C15−179.85 (13)C27—C28—C29—N70.3 (2)
C17—N4—C16—N5−0.41 (15)C24—N6—C30—C31−153.22 (12)
C23—N4—C16—N5179.89 (12)C25—N6—C30—C3149.24 (15)
C17—N4—C16—C15179.87 (12)N6—C30—C31—C3262.82 (15)
C23—N4—C16—C150.2 (2)C33—O5—C32—O40.0 (2)
N3—C15—C16—N5−1.54 (19)C33—O5—C32—C31−178.75 (12)
N3—C15—C16—N4178.13 (12)C30—C31—C32—O436.1 (2)
C16—N4—C17—C22179.36 (14)C30—C31—C32—O5−145.15 (12)
C23—N4—C17—C22−0.9 (2)C32—O5—C33—C34−176.98 (12)
C16—N4—C17—C180.18 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1···O7i0.896 (17)1.980 (18)2.8468 (16)162.5 (15)
N1—H2···O10.902 (15)1.931 (16)2.6281 (16)132.7 (13)
O6—H8···N50.912 (19)1.88 (2)2.7938 (16)176.3 (16)
O6—H16···O3ii0.84 (2)2.00 (2)2.8373 (15)172.1 (18)
O7—H17···O80.861 (19)1.954 (19)2.8061 (16)170.2 (18)
O7—H18···O90.881 (18)1.871 (19)2.7513 (15)176.5 (17)
O9—H20···N20.93 (2)2.00 (2)2.9226 (16)168.8 (19)
O9—H20···O20.93 (2)2.43 (2)3.1126 (14)129.6 (16)
O9—H24···N7iii0.844 (19)2.050 (19)2.8918 (16)175.5 (18)
O8—H25···O60.84 (2)2.04 (2)2.8689 (17)171 (2)
O8—H32···O6iii0.94 (2)1.89 (2)2.8291 (17)175.3 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O7i 0.896 (17)1.980 (18)2.8468 (16)162.5 (15)
N1—H2⋯O10.902 (15)1.931 (16)2.6281 (16)132.7 (13)
O6—H8⋯N50.912 (19)1.88 (2)2.7938 (16)176.3 (16)
O6—H16⋯O3ii 0.84 (2)2.00 (2)2.8373 (15)172.1 (18)
O7—H17⋯O80.861 (19)1.954 (19)2.8061 (16)170.2 (18)
O7—H18⋯O90.881 (18)1.871 (19)2.7513 (15)176.5 (17)
O9—H20⋯N20.93 (2)2.00 (2)2.9226 (16)168.8 (19)
O9—H20⋯O20.93 (2)2.43 (2)3.1126 (14)129.6 (16)
O9—H24⋯N7iii 0.844 (19)2.050 (19)2.8918 (16)175.5 (18)
O8—H25⋯O60.84 (2)2.04 (2)2.8689 (17)171 (2)
O8—H32⋯O6iii 0.94 (2)1.89 (2)2.8291 (17)175.3 (17)

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Dabigatran etexilate--a novel, reversible, oral direct thrombin inhibitor: interpretation of coagulation assays and reversal of anticoagulant activity.

Authors:  Joanne van Ryn; Joachim Stangier; Sebastian Haertter; Karl-Heinz Liesenfeld; Wolfgang Wienen; Martin Feuring; Andreas Clemens
Journal:  Thromb Haemost       Date:  2010-03-29       Impact factor: 5.249

Review 3.  Dabigatran in clinical practice.

Authors:  Rangadham Nagarakanti; Christopher R Ellis
Journal:  Clin Ther       Date:  2012-09-29       Impact factor: 3.393

  3 in total

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