Literature DB >> 23476213

2-(3,5-Dimethyl-1H-pyrazol-1-yl)-2-hy-droxy-imino-N'-[1-(pyridin-2-yl)ethyl-idene]acetohydrazide.

Maxym O Plutenko1, Rostislav D Lampeka, Matti Haukka, Ebbe Nordlander.   

Abstract

In the title compound, C14H16N6O2, the dihedral angles formed by the mean plane of the acetohydrazide group [maximum deviation 0.0629 (12) Å] with the pyrazole and pyridine rings are 81.62 (6) and 38.38 (4)° respectively. In the crystal, mol-ecules are connected by N-H⋯O and O-H⋯N hydrogen bonds into supra-molecular chains extending parallel to the c-axis direction.

Entities:  

Year:  2012        PMID: 23476213      PMCID: PMC3588977          DOI: 10.1107/S1600536812045412

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For uses of polynuclear complexes, see: Świątek-Kozłowska et al. (2000 ▶); Wörl et al. (2005 ▶). For the use of oximes having additional donor functions as versatile ligands, see: Krämer & Fritsky (2000 ▶); Sachse et al. (2008 ▶); Kanderal et al. (2005 ▶). For related structures, see: Moroz et al. (2012 ▶); Mokhir et al. (2002 ▶); Sliva et al. (1997 ▶). For the synthesis, see: Kozikowski & Adamczyk (1983 ▶).

Experimental

Crystal data

C14H16N6O2 M = 300.33 Monoclinic, a = 24.5792 (6) Å b = 7.5795 (2) Å c = 8.3072 (2) Å β = 107.335 (1)° V = 1477.32 (6) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.36 × 0.28 × 0.21 mm

Data collection

Bruker Kappa APEXII DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008 ▶) T min = 0.966, T max = 0.980 8846 measured reflections 4395 independent reflections 4096 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.081 S = 1.03 4395 reflections 204 parameters 3 restraints H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2009 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812045412/rz5011sup1.cif Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812045412/rz5011Isup2.mol Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812045412/rz5011Isup3.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812045412/rz5011Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H16N6O2F(000) = 632
Mr = 300.33Dx = 1.350 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 5439 reflections
a = 24.5792 (6) Åθ = 3.5–32.2°
b = 7.5795 (2) ŵ = 0.10 mm1
c = 8.3072 (2) ÅT = 100 K
β = 107.335 (1)°Block, colourless
V = 1477.32 (6) Å30.36 × 0.28 × 0.21 mm
Z = 4
Bruker Kappa APEXII DUO CCD diffractometer4395 independent reflections
Radiation source: fine-focus sealed tube4096 reflections with I > 2σ(I)
Curved graphite crystal monochromatorRint = 0.016
Detector resolution: 16 pixels mm-1θmax = 32.2°, θmin = 1.7°
φ scans and ω scans with κ offseth = −28→36
Absorption correction: multi-scan (SADABS; Sheldrick, 2008)k = −11→11
Tmin = 0.966, Tmax = 0.980l = −12→12
8846 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0459P)2 + 0.467P] where P = (Fo2 + 2Fc2)/3
4395 reflections(Δ/σ)max = 0.001
204 parametersΔρmax = 0.36 e Å3
3 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.36481 (4)0.69023 (11)0.54259 (10)0.01537 (16)
O20.22703 (4)0.54704 (12)0.05549 (11)0.01825 (18)
H2O0.22250.4597−0.01650.027*
N10.56071 (4)0.19215 (14)0.65828 (13)0.01662 (19)
N20.42935 (4)0.41283 (13)0.53143 (12)0.01403 (18)
N30.38561 (4)0.46283 (14)0.39135 (11)0.01331 (17)
H3N0.37780.41530.29370.019 (4)*
N40.27952 (4)0.51059 (13)0.16581 (12)0.01522 (18)
N50.26314 (4)0.76793 (12)0.30874 (11)0.01181 (17)
N60.21438 (4)0.73146 (13)0.35109 (11)0.01289 (18)
C10.51137 (5)0.25530 (15)0.67204 (14)0.01364 (19)
C20.50044 (5)0.27091 (17)0.82763 (15)0.0172 (2)
H20.46480.31420.83330.021*
C30.54243 (6)0.22232 (18)0.97295 (16)0.0202 (2)
H30.53600.23181.07990.024*
C40.59418 (5)0.15935 (17)0.96004 (15)0.0185 (2)
H40.62400.12621.05750.022*
C50.60086 (5)0.14650 (17)0.80058 (15)0.0179 (2)
H50.63600.10260.79160.021*
C60.46826 (5)0.30868 (16)0.51196 (14)0.01365 (19)
C70.47343 (6)0.24075 (18)0.34765 (15)0.0189 (2)
H7A0.44670.14280.30840.028*
H7B0.51240.19940.36340.028*
H7C0.46450.33570.26380.028*
C80.35246 (5)0.59735 (15)0.41689 (13)0.01189 (19)
C90.29671 (5)0.62508 (16)0.28350 (13)0.01239 (19)
C100.19299 (5)0.88846 (16)0.37111 (14)0.0156 (2)
C110.13847 (6)0.89937 (19)0.41554 (17)0.0226 (3)
H11A0.10830.94590.31920.034*
H11B0.14350.97800.51260.034*
H11C0.12780.78150.44400.034*
C120.22777 (6)1.02525 (16)0.34214 (16)0.0191 (2)
H120.22161.14850.34780.023*
C130.27257 (5)0.94425 (15)0.30399 (15)0.0156 (2)
C140.32359 (6)1.01682 (18)0.26595 (17)0.0227 (3)
H0AA0.35551.02280.37000.034*
H0AB0.31511.13550.21820.034*
H0AC0.33380.94010.18460.034*
U11U22U33U12U13U23
O10.0150 (4)0.0166 (4)0.0135 (4)0.0014 (3)0.0026 (3)−0.0019 (3)
O20.0122 (4)0.0191 (4)0.0188 (4)0.0038 (3)−0.0025 (3)−0.0061 (3)
N10.0132 (4)0.0191 (5)0.0162 (4)0.0036 (4)0.0025 (4)0.0002 (4)
N20.0111 (4)0.0165 (4)0.0129 (4)0.0010 (3)0.0012 (3)0.0014 (3)
N30.0116 (4)0.0160 (4)0.0110 (4)0.0033 (3)0.0013 (3)−0.0007 (3)
N40.0110 (4)0.0163 (4)0.0161 (4)0.0018 (4)0.0007 (3)−0.0024 (4)
N50.0111 (4)0.0104 (4)0.0139 (4)0.0001 (3)0.0036 (3)−0.0001 (3)
N60.0108 (4)0.0134 (4)0.0147 (4)0.0011 (3)0.0040 (3)0.0013 (3)
C10.0126 (5)0.0130 (5)0.0145 (5)0.0012 (4)0.0028 (4)0.0005 (4)
C20.0148 (5)0.0221 (6)0.0151 (5)0.0044 (4)0.0052 (4)0.0023 (4)
C30.0199 (6)0.0250 (6)0.0153 (5)0.0036 (5)0.0048 (5)0.0035 (4)
C40.0166 (5)0.0189 (5)0.0168 (5)0.0021 (4)0.0001 (4)0.0041 (4)
C50.0119 (5)0.0203 (5)0.0197 (5)0.0045 (4)0.0018 (4)0.0005 (4)
C60.0113 (5)0.0155 (5)0.0133 (5)0.0008 (4)0.0024 (4)0.0002 (4)
C70.0161 (5)0.0242 (6)0.0151 (5)0.0072 (5)0.0027 (4)−0.0004 (4)
C80.0101 (5)0.0129 (5)0.0128 (4)0.0001 (4)0.0034 (4)0.0013 (4)
C90.0111 (4)0.0125 (5)0.0135 (5)0.0016 (4)0.0035 (4)0.0003 (4)
C100.0155 (5)0.0154 (5)0.0156 (5)0.0037 (4)0.0039 (4)−0.0009 (4)
C110.0183 (6)0.0264 (6)0.0249 (6)0.0057 (5)0.0094 (5)−0.0016 (5)
C120.0215 (6)0.0115 (5)0.0237 (6)0.0026 (4)0.0056 (5)−0.0001 (4)
C130.0165 (5)0.0126 (5)0.0170 (5)−0.0014 (4)0.0039 (4)0.0018 (4)
C140.0208 (6)0.0207 (6)0.0277 (6)−0.0052 (5)0.0087 (5)0.0048 (5)
O1—C81.2204 (14)C4—C51.3859 (17)
O2—N41.3697 (13)C4—H40.9500
O2—H2O0.8763C5—H50.9500
N1—C11.3400 (15)C6—C71.4991 (16)
N1—C51.3401 (15)C7—H7A0.9800
N2—C61.2870 (15)C7—H7B0.9800
N2—N31.3814 (13)C7—H7C0.9800
N3—C81.3607 (14)C8—C91.4982 (15)
N3—H3N0.8555C10—C121.4094 (18)
N4—C91.2811 (15)C10—C111.4943 (17)
N5—C131.3589 (14)C11—H11A0.9800
N5—N61.3738 (13)C11—H11B0.9800
N5—C91.4144 (14)C11—H11C0.9800
N6—C101.3314 (15)C12—C131.3775 (18)
C1—C21.4013 (16)C12—H120.9500
C1—C61.4884 (15)C13—C141.4870 (18)
C2—C31.3841 (17)C14—H0AA0.9800
C2—H20.9500C14—H0AB0.9800
C3—C41.3922 (18)C14—H0AC0.9800
C3—H30.9500
N4—O2—H2O102.0H7A—C7—H7B109.5
C1—N1—C5117.66 (10)C6—C7—H7C109.5
C6—N2—N3118.91 (9)H7A—C7—H7C109.5
C8—N3—N2115.22 (9)H7B—C7—H7C109.5
C8—N3—H3N119.2O1—C8—N3123.90 (10)
N2—N3—H3N125.6O1—C8—C9119.44 (10)
C9—N4—O2113.87 (9)N3—C8—C9116.61 (9)
C13—N5—N6112.00 (9)N4—C9—N5123.87 (10)
C13—N5—C9129.53 (10)N4—C9—C8119.37 (10)
N6—N5—C9118.41 (9)N5—C9—C8116.30 (9)
C10—N6—N5105.03 (9)N6—C10—C12110.72 (10)
N1—C1—C2122.41 (11)N6—C10—C11119.80 (11)
N1—C1—C6116.25 (10)C12—C10—C11129.47 (11)
C2—C1—C6121.34 (10)C10—C11—H11A109.5
C3—C2—C1118.94 (11)C10—C11—H11B109.5
C3—C2—H2120.5H11A—C11—H11B109.5
C1—C2—H2120.5C10—C11—H11C109.5
C2—C3—C4119.01 (11)H11A—C11—H11C109.5
C2—C3—H3120.5H11B—C11—H11C109.5
C4—C3—H3120.5C13—C12—C10106.18 (10)
C5—C4—C3117.96 (11)C13—C12—H12126.9
C5—C4—H4121.0C10—C12—H12126.9
C3—C4—H4121.0N5—C13—C12106.06 (10)
N1—C5—C4124.00 (11)N5—C13—C14122.13 (11)
N1—C5—H5118.0C12—C13—C14131.80 (11)
C4—C5—H5118.0C13—C14—H0AA109.5
N2—C6—C1114.35 (9)C13—C14—H0AB109.5
N2—C6—C7126.36 (10)H0AA—C14—H0AB109.5
C1—C6—C7119.29 (10)C13—C14—H0AC109.5
C6—C7—H7A109.5H0AA—C14—H0AC109.5
C6—C7—H7B109.5H0AB—C14—H0AC109.5
D—H···AD—HH···AD···AD—H···A
O2—H2O···N6i0.881.792.6686 (13)175
N3—H3N···O1i0.862.173.0196 (13)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2O⋯N6i 0.881.792.6686 (13)175
N3—H3N⋯O1i 0.862.173.0196 (13)174

Symmetry code: (i) .

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4.  Regular high-nuclearity species from square building blocks: a triangular 3 × [2 × 2] Ni12 complex generated by the self-assembly of three [2 × 2] Ni4 molecular grids.

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  4 in total
  2 in total

1.  Crystal structure of 2-hy-droxy-imino-2-(pyridin-2-yl)-N'-[1-(pyridin-2-yl)ethyl-idene]acetohydrazide.

Authors:  Maxym O Plutenko; Rostislav D Lampeka; Matti Haukka; Ebbe Nordlander
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-29

2.  A second monoclinic polymorph of 2-(3,5-dimethyl-1H-pyrazol-1-yl)-2-hy-droxy-imino-N'-[1-(pyridin-2-yl)ethyl-idene]acetohydrazide.

Authors:  Maxym O Plutenko; Rostislav D Lampeka; Matti Haukka; Ebbe Nordlander
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-20
  2 in total

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