| Literature DB >> 23471542 |
Abstract
Hectares of genetically modified (GM) crops have increased exponentially since 1996, when such crops began to be commercialized. GM biotechnology, together with conventional breeding, has become the main approach to improving agronomic traits of crops. However, people are concerned about the safety of GM crops, especially GM-derived food and feed. Many efforts have been made to evaluate the unintended effects caused by the introduction of exogenous genes. "Omics" techniques have advantages over targeted analysis in evaluating such crops because of their use of high-throughput screening. Proteins are key players in gene function and are directly involved in metabolism and cellular development or have roles as toxins, antinutrients, or allergens, which are essential for human health. Thus, proteomics can be expected to become one of the most useful tools in safety assessment. This review assesses the potential of proteomics in evaluating various GM crops. We further describe the challenges in ensuring homogeneity and sensitivity in detection techniques.Entities:
Keywords: biological safety; genetically modified crops; proteome and proteomics; substantial equivalence; unintended effects
Year: 2013 PMID: 23471542 PMCID: PMC3590489 DOI: 10.3389/fpls.2013.00041
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Use of proteomic techniques to evaluate genetically modified crops.
| Maize | CryIA(b)/ | Insect resistance | Seeds | Detection of unintended effects | 2-DE, MALDI-TOF MS | Albo et al., | |
| CryIA(b)/ | Insect resistance | Seeds | Detection of unintended effects | 2-DE, nLC-ESI-IT MS/MS | Zolla et al., | ||
| CryIA(b)/ | Insect resistance | Seeds | Detection of unintended effects | 2-DE, ESI-IT MS/MS | Coll et al., | ||
| CryIA(b)/ | Insect resistance | Leaves | Detection of unintended effects | 2-DE, MALDI-TOF MS | Balsamo et al., | ||
| CryIA(b)/ | Insect resistance | Seeds | Detection of unintended effects | 2-DE, no identification | Barros et al., | ||
| CP4 EPSPS/ | Glyphosate tolerance | ||||||
| Pea | Bean ( | α-amylase inhibitor-1/α | Pea weevil resistance | Seeds | Detection of unintended effects | DIGE, ESI Q-TOF MS/MS | Islam et al., |
| Bean | α-amylase inhibitor-1/α | Pea weevil resistance | Seeds | Detection of unintended effects | 2-DE, MALDI-TOF MS/MS | Chen et al., | |
| Potato | Potato | Antisense G1-1 gene/ | Sprouting delay | Tubers | Functional characterization of GM crops | MALDI-TOF MS | Careri et al., |
| Glucan branching enzyme/ | Waxy phenotype | Tubers | Detection of unintended effects | 2-DE, μLC-ESI-IT MS/MS, μLC-ESI-QqTOF MS/MS | Lehesranta et al., | ||
| Potato | Glycoprotein/ | Changes in cell wall structure | |||||
| Potato | AdoMetDC/ | Modified metabolism | |||||
| Tomato | Cathepsin D inhibitor/sl | n | Leaves | Functional characterization of GM crops | 2-DE, SELDI TOF MS | Goulet et al., | |
| Tomato | Cathepsin D inhibitor/sl | n | Tubers | Detection of unintended effects | 2-DE, LC-ESI-IT MS/MS | Khalf et al., | |
| Rice | Rice | YK1/YK1 | Several stress tolerance | Cultured cells | Functional characterization of GM crops | 2-DE, internal amino acid sequencing | Takahashi et al., |
| Human ( | hGM-CSF/ | hGM-CSF reactor | Seeds | Functional characterization of GM crops | iTRAQ, nLC ESI-QTOF MS/MS | Luo et al., | |
| PAT/ | Herbicide resistance | Seeds | Detection of unintended effects | DIGE, MALDI-TOF MS | Gong et al., | ||
| CryIAc/cowpea trypsin inhibitor/ | Insect resistance | Seeds | |||||
| Sunflower ( | SSA/SSA | n | Seeds | Functional characterization of GM crops | 2-DE, MALDI-TOF MS | Islam et al., | |
| Rice | thaumatin-like protein/thaumatin-like gene | Bacterial blight disease resistance | Leafs | Functional characterization of GM crops | 2-DE, N-terminal amino acid sequencing, MALDI-TOF MS | Mahmood et al., | |
| Soybean | CP4 EPSPS/ | Glyphosate tolerance | Seeds | Optimization of parameters | 2-DE, MALDI-QTOF MS | Brandao et al., | |
| CP4 EPSPS/ | Glyphosate tolerance | Seeds | Functional characterization of GM crops | 2-DE, DIGE, MALDI-QTOF MS, MALDI-QTOF MS/MS, ESI-QTOF MS/MS | Barbosa et al., | ||
| CP4 EPSPS/ | Glyphosate tolerance | Seeds | Functional characterization of GM crops | 2-DE, LC-MS/MS | Batista et al., | ||
| Tobacco | AdoMetDC/ | Perturbed polyamine metabolism | Leaves | Functional characterization of GM crops | 2-DE, MALDI-TOF MS, ESI-QTOF MS/MS | Franceschetti et al., | |
| Tomato | Prosystemin/Prosystemin gene | Insect resistance | Leaves | Detection of unintended effects | 2-DE, MALDI-TOF MS, μLC-ESI-IT MS/MS | Rocco et al., | |
| n | ScFv B9/scFv B9 | Virus resistance | Leaves | Detection of unintended effects | DIGE, MALDI-TOF MS, μLC-ESI-IT MS/MS | Di Carli et al., | |
| Tomato | Tomato spotted wilt virus | TSWV nucleoprotein/ | Virus resistance | Seeds | Detection of unintended effects | 2-DE, MALDI-TOF MS | Corpillo et al., |
| n | ScFv G4/scFv G4 | Virus resistance | Leaves | Detection of unintended effects | DIGE, MALDI-TOF MS, μLC-ESI-IT MS/MS | Di Carli et al., | |
| n | ScFv G4/scFv G4 | Virus resistance | Leaves | Functional characterization of GM crops | DIGE, μLC-ESI-IT MS/MS | Di Carli et al., | |
| Wheat | Tobacco | Rab-1/ | Improved functional properties | Seeds | Detection of unintended effects | 2-DE, MALDI-TOF MS, nESI-QqTOF MS/MS | Di Luccia et al., |
| PAT/ | Herbicide resistance | Seeds | Functional characterization of GM crops | 2-DE, MALDI-TOF MS, MALDI-IT MS/MS | Horvath-Szanics et al., | ||
| Wheat | LMW-GS/LMW-GS gene | Improved functional properties | Seeds | Functional characterization of GM crops | 2-DE, LC-ESI-QTOF MS/MS | Scossa et al., |
n, no information.