Literature DB >> 23470124

Impact of spike train autostructure on probability distribution of joint spike events.

Gordon Pipa1, Sonja Grün, Carl van Vreeswijk.   

Abstract

The discussion whether temporally coordinated spiking activity really exists and whether it is relevant has been heated over the past few years. To investigate this issue, several approaches have been taken to determine whether synchronized events occur significantly above chance, that is, whether they occur more often than expected if the neurons fire independently. Most investigations ignore or destroy the autostructure of the spiking activity of individual cells or assume Poissonian spiking as a model. Such methods that ignore the autostructure can significantly bias the coincidence statistics. Here, we study the influence of the autostructure on the probability distribution of coincident spiking events between tuples of mutually independent non-Poisson renewal processes. In particular, we consider two types of renewal processes that were suggested as appropriate models of experimental spike trains: a gamma and a log-normal process. For a gamma process, we characterize the shape of the distribution analytically with the Fano factor (FFc). In addition, we perform Monte Carlo estimations to derive the full shape of the distribution and the probability for false positives if a different process type is assumed as was actually present. We also determine how manipulations of such spike trains, here dithering, used for the generation of surrogate data change the distribution of coincident events and influence the significance estimation. We find, first, that the width of the coincidence count distribution and its FFc depend critically and in a nontrivial way on the detailed properties of the structure of the spike trains as characterized by the coefficient of variation CV. Second, the dependence of the FFc on the CV is complex and mostly nonmonotonic. Third, spike dithering, even if as small as a fraction of the interspike interval, can falsify the inference on coordinated firing.

Mesh:

Year:  2013        PMID: 23470124     DOI: 10.1162/NECO_a_00432

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  11 in total

1.  Robustness of the significance of spike synchrony with respect to sorting errors.

Authors:  Antonio Pazienti; Sonja Grün
Journal:  J Comput Neurosci       Date:  2006-08-14       Impact factor: 1.621

2.  Comparing Surrogates to Evaluate Precisely Timed Higher-Order Spike Correlations.

Authors:  Alessandra Stella; Peter Bouss; Günther Palm; Sonja Grün
Journal:  eNeuro       Date:  2022-06-09

3.  A general method to generate artificial spike train populations matching recorded neurons.

Authors:  Samira Abbasi; Selva Maran; Dieter Jaeger
Journal:  J Comput Neurosci       Date:  2020-01-23       Impact factor: 1.621

4.  Spike-Centered Jitter Can Mistake Temporal Structure.

Authors:  Jonathan Platkiewicz; Eran Stark; Asohan Amarasingham
Journal:  Neural Comput       Date:  2017-01-17       Impact factor: 2.026

5.  Information theoretic analysis of proprioceptive encoding during finger flexion in the monkey sensorimotor system.

Authors:  Claire L Witham; Stuart N Baker
Journal:  J Neurophysiol       Date:  2014-10-08       Impact factor: 2.714

6.  Serial Spike Time Correlations Affect Probability Distribution of Joint Spike Events.

Authors:  Mina Shahi; Carl van Vreeswijk; Gordon Pipa
Journal:  Front Comput Neurosci       Date:  2016-12-23       Impact factor: 2.380

7.  Methods for identification of spike patterns in massively parallel spike trains.

Authors:  Pietro Quaglio; Vahid Rostami; Emiliano Torre; Sonja Grün
Journal:  Biol Cybern       Date:  2018-04-12       Impact factor: 2.086

8.  Fano Factor: A Potentially Useful Information.

Authors:  Kamil Rajdl; Petr Lansky; Lubomir Kostal
Journal:  Front Comput Neurosci       Date:  2020-11-20       Impact factor: 2.380

9.  ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains.

Authors:  Emiliano Torre; Carlos Canova; Michael Denker; George Gerstein; Moritz Helias; Sonja Grün
Journal:  PLoS Comput Biol       Date:  2016-07-15       Impact factor: 4.475

10.  Transmission of temporally correlated spike trains through synapses with short-term depression.

Authors:  Alex D Bird; Magnus J E Richardson
Journal:  PLoS Comput Biol       Date:  2018-06-22       Impact factor: 4.475

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