Literature DB >> 23468706

Bis[O-methyl (4-eth-oxy-phen-yl)dithio-phospho-nato-κ(2) S,S']nickel(II).

Shirveen Sewpersad1, Bernard Omondi, Werner E Van Zyl.   

Abstract

In the title compound, [Ni(C9H12O2PS2)2], the Ni(II) atom resides on an inversion center and is coordinated by four S atoms [Ni-S = 2.2328 (4) and 2.2455 (3) Å] in a distorted square-planar geometry [S-Ni-S = 88.443 (13) and 91.557 (13)°]. In the crystal, mol-ecules related by translation in [110] are linked into chains via weak C-H⋯O inter-actions. The crystal packing exhibits short inter-molecular S⋯S contacts of 3.3366 (5) Å.

Entities:  

Year:  2012        PMID: 23468706      PMCID: PMC3588741          DOI: 10.1107/S1600536812046314

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For information on dithio­phospho­nate compounds, see: Van Zyl & Fackler (2000 ▶); Van Zyl (2010 ▶); Van Zyl & Woollins (2012 ▶). For related structures of nickel(II) dithio­phospho­nate complexes, see: Hartung (1967 ▶); Liu et al. (2004 ▶); Gray et al. (2004 ▶); Aragoni et al. (2007 ▶); Arca et al. (1997 ▶); Özcan et al. (2002 ▶).

Experimental

Crystal data

[Ni(C9H12O2PS2)2] M = 553.26 Monoclinic, a = 13.5866 (5) Å b = 6.4212 (2) Å c = 14.1047 (5) Å β = 109.389 (2)° V = 1160.74 (7) Å3 Z = 2 Mo Kα radiation μ = 1.36 mm−1 T = 173 K 0.43 × 0.31 × 0.24 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.593, T max = 0.737 19824 measured reflections 2850 independent reflections 2609 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.062 S = 1.07 2850 reflections 135 parameters 2 restraints H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.44 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT-Plus (Bruker, 2008 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812046314/cv5358sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046314/cv5358Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C9H12O2PS2)2]F(000) = 572
Mr = 553.26Dx = 1.583 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 19824 reflections
a = 13.5866 (5) Åθ = 2.9–28.4°
b = 6.4212 (2) ŵ = 1.36 mm1
c = 14.1047 (5) ÅT = 173 K
β = 109.389 (2)°Block, purple
V = 1160.74 (7) Å30.43 × 0.31 × 0.24 mm
Z = 2
Bruker SMART APEXII CCD diffractometer2850 independent reflections
Radiation source: fine-focus sealed tube2609 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.036
φ and ω scansθmax = 28.4°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −18→17
Tmin = 0.593, Tmax = 0.737k = −8→8
19824 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.023Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0281P)2 + 0.7956P] where P = (Fo2 + 2Fc2)/3
2850 reflections(Δ/σ)max = 0.001
135 parametersΔρmax = 0.56 e Å3
2 restraintsΔρmin = −0.44 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.70393 (11)0.8288 (2)0.85131 (10)0.0149 (3)
C20.68704 (11)0.6590 (2)0.90614 (11)0.0175 (3)
H20.73980.55640.93060.021*
C30.59371 (12)0.6398 (2)0.92488 (12)0.0196 (3)
H30.58230.52370.96170.024*
C40.51619 (11)0.7913 (2)0.88969 (11)0.0167 (3)
C50.53108 (12)0.9588 (3)0.83320 (12)0.0202 (3)
H50.47771.05980.80750.024*
C60.62531 (12)0.9759 (3)0.81507 (12)0.0211 (3)
H60.63621.09050.77710.025*
C70.34352 (11)0.9068 (2)0.87693 (12)0.0199 (3)
H7A0.31910.91200.80260.024*
H7B0.36621.04800.90330.024*
C80.25769 (12)0.8303 (3)0.91356 (13)0.0258 (3)
H8A0.24010.68620.89150.039*
H8B0.19590.91860.88590.039*
H8C0.28120.83640.98710.039*
C90.88481 (12)0.8281 (3)0.67579 (12)0.0243 (3)
H9A0.91840.96500.68910.036*
H9B0.85620.80520.60310.036*
H9C0.93630.71970.70650.036*
O10.42818 (8)0.76065 (18)0.91366 (8)0.0210 (2)
O20.80067 (8)0.81965 (17)0.71841 (7)0.0172 (2)
P10.82716 (3)0.87053 (6)0.83456 (3)0.01290 (9)
S10.88018 (3)1.16115 (5)0.87163 (3)0.01505 (9)
S20.94269 (3)0.69659 (5)0.92450 (3)0.01547 (9)
Ni11.00001.00001.00000.01236 (8)
U11U22U33U12U13U23
C10.0126 (6)0.0163 (7)0.0142 (6)−0.0026 (5)0.0024 (5)−0.0008 (5)
C20.0168 (7)0.0162 (7)0.0186 (7)0.0021 (5)0.0050 (5)0.0025 (6)
C30.0200 (7)0.0181 (7)0.0218 (7)0.0007 (6)0.0085 (6)0.0061 (6)
C40.0156 (6)0.0187 (7)0.0157 (6)−0.0013 (6)0.0050 (5)−0.0007 (6)
C50.0152 (7)0.0194 (7)0.0246 (7)0.0024 (6)0.0050 (6)0.0065 (6)
C60.0177 (7)0.0201 (7)0.0252 (7)0.0005 (6)0.0067 (6)0.0088 (6)
C70.0171 (7)0.0192 (7)0.0239 (7)0.0027 (6)0.0074 (6)−0.0006 (6)
C80.0209 (7)0.0271 (9)0.0324 (9)0.0015 (6)0.0127 (7)−0.0004 (7)
C90.0219 (7)0.0328 (9)0.0212 (7)0.0004 (7)0.0113 (6)−0.0025 (7)
O10.0176 (5)0.0231 (6)0.0251 (5)0.0041 (4)0.0107 (4)0.0069 (5)
O20.0164 (5)0.0212 (5)0.0133 (5)−0.0019 (4)0.0038 (4)−0.0016 (4)
P10.01195 (16)0.01266 (17)0.01283 (16)−0.00089 (13)0.00241 (13)0.00025 (13)
S10.01442 (16)0.01179 (16)0.01655 (16)−0.00085 (12)0.00194 (13)0.00125 (13)
S20.01453 (16)0.01163 (17)0.01733 (16)0.00058 (12)0.00138 (13)−0.00038 (13)
Ni10.01162 (12)0.01061 (13)0.01350 (12)−0.00046 (9)0.00235 (9)0.00017 (9)
C1—C61.390 (2)C8—H8A0.9800
C1—C21.399 (2)C8—H8B0.9800
C1—P11.7871 (14)C8—H8C0.9800
C2—C31.384 (2)C9—O21.4585 (17)
C2—H20.9500C9—H9A0.9800
C3—C41.398 (2)C9—H9B0.9800
C3—H30.9500C9—H9C0.9800
C4—O11.3606 (17)O2—P11.5902 (10)
C4—C51.393 (2)P1—S21.9996 (5)
C5—C61.391 (2)P1—S12.0061 (5)
C5—H50.9500P1—Ni12.8306 (4)
C6—H60.9500S1—Ni12.2455 (3)
C7—O11.4408 (18)S2—Ni12.2328 (4)
C7—C81.506 (2)Ni1—S2i2.2328 (4)
C7—H7A0.9900Ni1—S1i2.2455 (3)
C7—H7B0.9900Ni1—P1i2.8306 (4)
C6—C1—C2119.07 (13)O2—C9—H9C109.5
C6—C1—P1119.25 (11)H9A—C9—H9C109.5
C2—C1—P1121.52 (11)H9B—C9—H9C109.5
C3—C2—C1120.23 (14)C4—O1—C7118.63 (12)
C3—C2—H2119.9C9—O2—P1118.47 (9)
C1—C2—H2119.9O2—P1—C1101.76 (6)
C2—C3—C4120.03 (14)O2—P1—S2113.60 (4)
C2—C3—H3120.0C1—P1—S2113.88 (5)
C4—C3—H3120.0O2—P1—S1113.49 (4)
O1—C4—C5124.08 (14)C1—P1—S1112.10 (5)
O1—C4—C3115.59 (13)S2—P1—S1102.47 (2)
C5—C4—C3120.33 (13)O2—P1—Ni1138.74 (4)
C6—C5—C4118.91 (14)C1—P1—Ni1119.49 (5)
C6—C5—H5120.5S2—P1—Ni151.639 (13)
C4—C5—H5120.5S1—P1—Ni151.985 (12)
C1—C6—C5121.39 (14)P1—S1—Ni183.279 (16)
C1—C6—H6119.3P1—S2—Ni183.755 (17)
C5—C6—H6119.3S2i—Ni1—S2180.0
O1—C7—C8106.33 (13)S2i—Ni1—S191.557 (13)
O1—C7—H7A110.5S2—Ni1—S188.443 (13)
C8—C7—H7A110.5S2i—Ni1—S1i88.443 (13)
O1—C7—H7B110.5S2—Ni1—S1i91.557 (13)
C8—C7—H7B110.5S1—Ni1—S1i180.0
H7A—C7—H7B108.7S2i—Ni1—P1i44.606 (11)
C7—C8—H8A109.5S2—Ni1—P1i135.394 (11)
C7—C8—H8B109.5S1—Ni1—P1i135.263 (12)
H8A—C8—H8B109.5S1i—Ni1—P1i44.737 (12)
C7—C8—H8C109.5S2i—Ni1—P1135.394 (11)
H8A—C8—H8C109.5S2—Ni1—P144.606 (11)
H8B—C8—H8C109.5S1—Ni1—P144.737 (12)
O2—C9—H9A109.5S1i—Ni1—P1135.263 (12)
O2—C9—H9B109.5P1i—Ni1—P1180.0
H9A—C9—H9B109.5
C6—C1—C2—C3−0.8 (2)C1—P1—S2—Ni1−109.65 (5)
P1—C1—C2—C3174.69 (12)S1—P1—S2—Ni111.639 (18)
C1—C2—C3—C4−0.5 (2)P1—S2—Ni1—S2i67 (100)
C2—C3—C4—O1−178.75 (14)P1—S2—Ni1—S1−10.140 (16)
C2—C3—C4—C51.9 (2)P1—S2—Ni1—S1i169.860 (16)
O1—C4—C5—C6178.78 (14)P1—S2—Ni1—P1i180.0
C3—C4—C5—C6−1.9 (2)P1—S1—Ni1—S2i−169.884 (16)
C2—C1—C6—C50.7 (2)P1—S1—Ni1—S210.116 (16)
P1—C1—C6—C5−174.82 (13)P1—S1—Ni1—S1i−11 (100)
C4—C5—C6—C10.6 (2)P1—S1—Ni1—P1i180.0
C5—C4—O1—C71.5 (2)O2—P1—Ni1—S2i97.35 (7)
C3—C4—O1—C7−177.89 (13)C1—P1—Ni1—S2i−81.64 (6)
C8—C7—O1—C4178.93 (13)S2—P1—Ni1—S2i180.000 (1)
C9—O2—P1—C1−177.47 (12)S1—P1—Ni1—S2i14.48 (2)
C9—O2—P1—S2−54.64 (12)O2—P1—Ni1—S2−82.65 (7)
C9—O2—P1—S161.90 (12)C1—P1—Ni1—S298.36 (6)
C9—O2—P1—Ni13.43 (15)S1—P1—Ni1—S2−165.52 (2)
C6—C1—P1—O2−74.92 (13)O2—P1—Ni1—S182.87 (7)
C2—C1—P1—O2109.62 (12)C1—P1—Ni1—S1−96.12 (6)
C6—C1—P1—S2162.44 (11)S2—P1—Ni1—S1165.52 (2)
C2—C1—P1—S2−13.02 (14)O2—P1—Ni1—S1i−97.13 (7)
C6—C1—P1—S146.67 (13)C1—P1—Ni1—S1i83.88 (6)
C2—C1—P1—S1−128.78 (11)S2—P1—Ni1—S1i−14.48 (2)
C6—C1—P1—Ni1104.40 (12)S1—P1—Ni1—S1i180.0
C2—C1—P1—Ni1−71.06 (13)O2—P1—Ni1—P1i−20 (100)
O2—P1—S1—Ni1−134.48 (4)C1—P1—Ni1—P1i161 (100)
C1—P1—S1—Ni1110.92 (5)S2—P1—Ni1—P1i63 (100)
S2—P1—S1—Ni1−11.583 (18)S1—P1—Ni1—P1i−102 (100)
O2—P1—S2—Ni1134.46 (5)
D—H···AD—HH···AD···AD—H···A
C3—H3···O1ii0.952.573.5123 (18)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯O1i 0.952.573.5123 (18)171

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  trans-Bis[O-2,4-di-tert-butylphenyl (4-methoxyphenyl)dithiophosphonato-kappa(2)S,S']nickel(II).

Authors:  Yusuf Ozcan; Semra Ide; Mehmet Karakus; Hamza Yilmaz
Journal:  Acta Crystallogr C       Date:  2002-06-20       Impact factor: 1.172

3.  Investigation into the reactivity of the coordinatively unsaturated phosphonodithioato [Ni(MeOpdt)2] towards 2,4,6-tris(2-pyridyl)-1,3,5-triazine: goals and achievements.

Authors:  M Carla Aragoni; Massimiliano Arca; Francesco A Devillanova; Michael B Hursthouse; Susanne L Huth; Francesco Isaia; Vito Lippolis; Annalisa Mancini; Serena Soddu; Gaetano Verani
Journal:  Dalton Trans       Date:  2007-04-02       Impact factor: 4.390

4.  Synthesis and structure of [An(RO)PS2]- complexes.

Authors:  Ian P Gray; Alexandra M Z Slawin; J Derek Woollins
Journal:  Dalton Trans       Date:  2004-07-02       Impact factor: 4.390

  4 in total

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