Literature DB >> 23467094

Naturally occurring allele diversity allows potato cultivation in northern latitudes.

Bjorn Kloosterman1, José A Abelenda, María del Mar Carretero Gomez, Marian Oortwijn, Jan M de Boer, Krissana Kowitwanich, Beatrix M Horvath, Herman J van Eck, Cezary Smaczniak, Salomé Prat, Richard G F Visser, Christian W B Bachem.   

Abstract

Potato (Solanum tuberosum L.) originates from the Andes and evolved short-day-dependent tuber formation as a vegetative propagation strategy. Here we describe the identification of a central regulator underlying a major-effect quantitative trait locus for plant maturity and initiation of tuber development. We show that this gene belongs to the family of DOF (DNA-binding with one finger) transcription factors and regulates tuberization and plant life cycle length, by acting as a mediator between the circadian clock and the StSP6A mobile tuberization signal. We also show that natural allelic variants evade post-translational light regulation, allowing cultivation outside the geographical centre of origin of potato. Potato is a member of the Solanaceae family and is one of the world's most important food crops. This annual plant originates from the Andean regions of South America. Potato develops tubers from underground stems called stolons. Its equatorial origin makes potato essentially short-day dependent for tuberization and potato will not make tubers in the long-day conditions of spring and summer in the northern latitudes. When introduced in temperate zones, wild material will form tubers in the course of the autumnal shortening of day-length. Thus, one of the first selected traits in potato leading to a European potato type is likely to have been long-day acclimation for tuberization. Potato breeders can exploit the naturally occurring variation in tuberization onset and life cycle length, allowing varietal breeding for different latitudes, harvest times and markets.

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Year:  2013        PMID: 23467094     DOI: 10.1038/nature11912

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  26 in total

1.  LOV KELCH PROTEIN2 and ZEITLUPE repress Arabidopsis photoperiodic flowering under non-inductive conditions, dependent on FLAVIN-BINDING KELCH REPEAT F-BOX1.

Authors:  Tomoyuki Takase; Yuuki Nishiyama; Haruna Tanihigashi; Yasunobu Ogura; Yuji Miyazaki; Yumiko Yamada; Tomohiro Kiyosue
Journal:  Plant J       Date:  2011-07-14       Impact factor: 6.417

Review 2.  From the model to the crop: genes controlling tuber formation in potato.

Authors:  José A Abelenda; Cristina Navarro; Salomé Prat
Journal:  Curr Opin Biotechnol       Date:  2010-12-16       Impact factor: 9.740

3.  LucTrap vectors are tools to generate luciferase fusions for the quantification of transcript and protein abundance in vivo.

Authors:  Luz Irina A Calderon-Villalobos; Carola Kuhnle; Hanbing Li; Mario Rosso; Bernd Weisshaar; Claus Schwechheimer
Journal:  Plant Physiol       Date:  2006-05       Impact factor: 8.340

4.  CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis.

Authors:  P Suárez-López; K Wheatley; F Robson; H Onouchi; F Valverde; G Coupland
Journal:  Nature       Date:  2001-04-26       Impact factor: 49.962

5.  A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping.

Authors:  David M Spooner; Karen McLean; Gavin Ramsay; Robbie Waugh; Glenn J Bryan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-03       Impact factor: 11.205

Review 6.  Seasonal control of tuberization in potato: conserved elements with the flowering response.

Authors:  Mariana Rodríguez-Falcón; Jordi Bou; Salomé Prat
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

7.  An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus.

Authors:  Olivier Voinnet; Susana Rivas; Pere Mestre; David Baulcombe
Journal:  Plant J       Date:  2003-03       Impact factor: 6.417

8.  A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana.

Authors:  M Koornneef; C J Hanhart; J H van der Veen
Journal:  Mol Gen Genet       Date:  1991-09

Review 9.  The timing of developmental transitions in plants.

Authors:  Isabel Bäurle; Caroline Dean
Journal:  Cell       Date:  2006-05-19       Impact factor: 41.582

10.  Implementation of two high through-put techniques in a novel application: detecting point mutations in large EMS mutated plant populations.

Authors:  Antoine Lf Gady; Freddy Wk Hermans; Marion Hbj Van de Wal; Eibertus N van Loo; Richard Gf Visser; Christian Wb Bachem
Journal:  Plant Methods       Date:  2009-10-07       Impact factor: 4.993

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  105 in total

Review 1.  Circadian redox signaling in plant immunity and abiotic stress.

Authors:  Steven H Spoel; Gerben van Ooijen
Journal:  Antioxid Redox Signal       Date:  2013-09-19       Impact factor: 8.401

2.  PcG Proteins MSI1 and BMI1 Function Upstream of miR156 to Regulate Aerial Tuber Formation in Potato.

Authors:  Amit Kumar; Kirtikumar Ramesh Kondhare; Pallavi Vijay Vetal; Anjan Kumar Banerjee
Journal:  Plant Physiol       Date:  2019-08-19       Impact factor: 8.340

3.  Natural diversity in daily rhythms of gene expression contributes to phenotypic variation.

Authors:  Amaury de Montaigu; Antonis Giakountis; Matthew Rubin; Réka Tóth; Frédéric Cremer; Vladislava Sokolova; Aimone Porri; Matthieu Reymond; Cynthia Weinig; George Coupland
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

Review 4.  The Multiple Signals That Control Tuber Formation.

Authors:  David J Hannapel; Pooja Sharma; Tian Lin; Anjan K Banerjee
Journal:  Plant Physiol       Date:  2017-04-18       Impact factor: 8.340

5.  Residual Heterozygosity and Epistatic Interactions Underlie the Complex Genetic Architecture of Yield in Diploid Potato.

Authors:  Alexandre P Marand; Shelley H Jansky; Joseph L Gage; Andy J Hamernik; Natalia de Leon; Jiming Jiang
Journal:  Genetics       Date:  2019-03-18       Impact factor: 4.562

6.  Identification of agronomically important QTL in tetraploid potato cultivars using a marker-trait association analysis.

Authors:  Björn B D'hoop; Paul L C Keizer; M João Paulo; Richard G F Visser; Fred A van Eeuwijk; Herman J van Eck
Journal:  Theor Appl Genet       Date:  2014-01-10       Impact factor: 5.699

7.  CYCLING DOF FACTOR 1 represses transcription through the TOPLESS co-repressor to control photoperiodic flowering in Arabidopsis.

Authors:  Greg S Goralogia; Tong-Kun Liu; Lin Zhao; Paul M Panipinto; Evan D Groover; Yashkarn S Bains; Takato Imaizumi
Journal:  Plant J       Date:  2017-09-05       Impact factor: 6.417

8.  Photoperiodic flowering regulation in Arabidopsis thaliana.

Authors:  Greg S Golembeski; Hannah A Kinmonth-Schultz; Young Hun Song; Takato Imaizumi
Journal:  Adv Bot Res       Date:  2014-01-01       Impact factor: 2.175

9.  A major QTL located on chromosome V associates with in vitro tuberization in a tetraploid potato population.

Authors:  Jun Zhou; Hui Fang; Jianwei Shan; Xiaoxi Gao; Lin Chen; Conghua Xie; Tingting Xie; Jun Liu
Journal:  Mol Genet Genomics       Date:  2014-03-12       Impact factor: 3.291

10.  Allelic diversity in an NLR gene BPH9 enables rice to combat planthopper variation.

Authors:  Yan Zhao; Jin Huang; Zhizheng Wang; Shengli Jing; Yang Wang; Yidan Ouyang; Baodong Cai; Xiu-Fang Xin; Xin Liu; Chunxiao Zhang; Yufang Pan; Rui Ma; Qiaofeng Li; Weihua Jiang; Ya Zeng; Xinxin Shangguan; Huiying Wang; Bo Du; Lili Zhu; Xun Xu; Yu-Qi Feng; Sheng Yang He; Rongzhi Chen; Qifa Zhang; Guangcun He
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

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