Literature DB >> 23456613

The human kinome and kinase inhibition.

Krisna C Duong-Ly1, Jeffrey R Peterson.   

Abstract

Protein and lipid kinases play key regulatory roles in a number of biological processes. Unsurprisingly, activating mutations in kinases have been linked to a number of disorders and diseases, most notably cancers. Thus, kinases have emerged as promising clinical targets. There are more than 500 human protein kinases and about 20 lipid kinases. Most protein kinases share a highly conserved domain, the eukaryotic protein kinase (ePK) domain, which contains the ATP and substrate-binding sites. Many inhibitors in clinical use bind to the highly conserved ATP binding site. For this reason, many kinase inhibitors are not exclusively selective for their intended targets. Furthermore, despite the current interest in kinase inhibitors, very few kinases implicated in disease have validated inhibitors. This unit describes the human kinome, ePK structure, and types of kinase inhibitors, focusing on methods to identify potent and selective kinase inhibitors. Curr. Protoc. Pharmacol. 60:2.9.1-2.9.14.
© 2013 by John Wiley & Sons, Inc.

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Year:  2013        PMID: 23456613      PMCID: PMC4128285          DOI: 10.1002/0471141755.ph0209s60

Source DB:  PubMed          Journal:  Curr Protoc Pharmacol        ISSN: 1934-8282


  63 in total

1.  GTP plus water mimic ATP in the active site of protein kinase CK2.

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Journal:  Nat Struct Biol       Date:  1999-12

2.  A chaperone-dependent GSK3beta transitional intermediate mediates activation-loop autophosphorylation.

Authors:  Pamela A Lochhead; Ross Kinstrie; Gary Sibbet; Teeara Rawjee; Nick Morrice; Vaughn Cleghon
Journal:  Mol Cell       Date:  2006-11-17       Impact factor: 17.970

3.  Fused transcript of abl and bcr genes in chronic myelogenous leukaemia.

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Journal:  Nature       Date:  1985 Jun 13-19       Impact factor: 49.962

Review 4.  Targeting cancer with small-molecular-weight kinase inhibitors.

Authors:  Doriano Fabbro; Sandra W Cowan-Jacob; Henrik Möbitz; Georg Martiny-Baron
Journal:  Methods Mol Biol       Date:  2012

5.  Targeted covalent drugs of the kinase family.

Authors:  Juswinder Singh; Russell C Petter; Arthur F Kluge
Journal:  Curr Opin Chem Biol       Date:  2010-07-06       Impact factor: 8.822

6.  Identification of Tyr-703 and Tyr-936 as the primary association sites for Grb2 and Grb7 in the c-Kit/stem cell factor receptor.

Authors:  K Thömmes; J Lennartsson; M Carlberg; L Rönnstrand
Journal:  Biochem J       Date:  1999-07-01       Impact factor: 3.857

7.  Small-molecule inhibition and activation-loop trans-phosphorylation of the IGF1 receptor.

Authors:  Jinhua Wu; Wanqing Li; Barbara P Craddock; Kenneth W Foreman; Mark J Mulvihill; Qun-sheng Ji; W Todd Miller; Stevan R Hubbard
Journal:  EMBO J       Date:  2008-06-19       Impact factor: 11.598

8.  Activation segment exchange: a common mechanism of kinase autophosphorylation?

Authors:  Antony W Oliver; Stefan Knapp; Laurence H Pearl
Journal:  Trends Biochem Sci       Date:  2007-07-12       Impact factor: 13.807

9.  A myristoyl/phosphotyrosine switch regulates c-Abl.

Authors:  Oliver Hantschel; Bhushan Nagar; Sebastian Guettler; Jana Kretzschmar; Karel Dorey; John Kuriyan; Giulio Superti-Furga
Journal:  Cell       Date:  2003-03-21       Impact factor: 41.582

10.  On the origins of enzyme inhibitor selectivity and promiscuity: a case study of protein kinase binding to staurosporine.

Authors:  Duangrudee Tanramluk; Adrian Schreyer; William R Pitt; Tom L Blundell
Journal:  Chem Biol Drug Des       Date:  2009-07       Impact factor: 2.817

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  28 in total

1.  Selection and optimization of enzyme reporters for chemical cytometry.

Authors:  Angela Proctor; Qunzhao Wang; David S Lawrence; Nancy L Allbritton
Journal:  Methods Enzymol       Date:  2019-03-23       Impact factor: 1.600

Review 2.  Host-Directed Antiviral Therapy.

Authors:  Naveen Kumar; Shalini Sharma; Ram Kumar; Bhupendra N Tripathi; Sanjay Barua; Hinh Ly; Barry T Rouse
Journal:  Clin Microbiol Rev       Date:  2020-05-13       Impact factor: 26.132

3.  Coral: Clear and Customizable Visualization of Human Kinome Data.

Authors:  Kathleen S Metz; Erika M Deoudes; Matthew E Berginski; Ivan Jimenez-Ruiz; Bulent Arman Aksoy; Jeff Hammerbacher; Shawn M Gomez; Douglas H Phanstiel
Journal:  Cell Syst       Date:  2018-08-29       Impact factor: 10.304

4.  MARK2 regulates chemotherapeutic responses through class IIa HDAC-YAP axis in pancreatic cancer.

Authors:  Yongji Zeng; Ling Yin; Jiuli Zhou; Renya Zeng; Yi Xiao; Adrian R Black; Tuo Hu; Pankaj K Singh; Feng Yin; Surinder K Batra; Fang Yu; Yuanhong Chen; Jixin Dong
Journal:  Oncogene       Date:  2022-07-02       Impact factor: 8.756

5.  Pharmacokinetic Optimization of Small Molecule Janus Kinase 3 Inhibitors to Target Immune Cells.

Authors:  Julian Laux; Michael Forster; Laura Riexinger; Anna Schwamborn; Jamil Guezguez; Christina Pokoj; Mark Kudolo; Lena M Berger; Stefan Knapp; Dieter Schollmeyer; Jan Guse; Michael Burnet; Stefan A Laufer
Journal:  ACS Pharmacol Transl Sci       Date:  2022-07-14

6.  3D-QSAR-Based Pharmacophore Modeling, Virtual Screening, and Molecular Dynamics Simulations for the Identification of Spleen Tyrosine Kinase Inhibitors.

Authors:  Vikas Kumar; Shraddha Parate; Amir Zeb; Pooja Singh; Gihwan Lee; Tae Sung Jung; Keun Woo Lee; Min Woo Ha
Journal:  Front Cell Infect Microbiol       Date:  2022-06-30       Impact factor: 6.073

Review 7.  DYRK1A: a down syndrome-related dual protein kinase with a versatile role in tumorigenesis.

Authors:  Amina Jamal Laham; Maha Saber-Ayad; Raafat El-Awady
Journal:  Cell Mol Life Sci       Date:  2020-09-01       Impact factor: 9.261

8.  A High-Throughput Radiometric Kinase Assay.

Authors:  Krisna C Duong-Ly; Jeffrey R Peterson
Journal:  Methods Mol Biol       Date:  2016

9.  CHK1 Inhibitor Blocks Phosphorylation of FAM122A and Promotes Replication Stress.

Authors:  Feng Li; David Kozono; Peter Deraska; Timothy Branigan; Connor Dunn; Xiao-Feng Zheng; Kalindi Parmar; Huy Nguyen; James DeCaprio; Geoffrey I Shapiro; Dipanjan Chowdhury; Alan D D'Andrea
Journal:  Mol Cell       Date:  2020-10-26       Impact factor: 17.970

10.  A novel screening approach comparing kinase activity of small molecule inhibitors with similar molecular structures and distinct biologic effects in triple-negative breast cancer to identify targetable signaling pathways.

Authors:  Margarite D Matossian; Hope E Burks; Steven Elliott; Van T Hoang; William J Zuercher; Carrow Wells; David H Drewry; Nirav Kapadia; Tiffany Chang; Thomas Yan; Gabrielle O Windsor; Khoa Nguyen; Fang Fang; Kenneth P Nephew; Aaron Buechlein; Douglas B Rusch; Rachel A Sabol; Deniz A Ucar; Jovanny Zabaleta; Lucio Miele; Bruce A Bunnell; Bridgette M Collins-Burow; Matthew E Burow
Journal:  Anticancer Drugs       Date:  2020-09       Impact factor: 2.389

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