Literature DB >> 23447454

Enzyme-free unlabeled DNA logic circuits based on toehold-mediated strand displacement and split G-quadruplex enhanced fluorescence.

Jinbo Zhu1, Libing Zhang, Tao Li, Shaojun Dong, Erkang Wang.   

Abstract

Adopting fluorescence of PPIX enhanced by a split G-quadruplex and toehold mediated strand displacement reaction, a series of unlabeled fluorescent logic gates is set up and some of them are cascaded into circuits. Controlled release of PPIX, which is also a photosensitizer in photodynamic diagnosis and therapy, is realized by this circuit, making it a wise choice for DNA computing.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2013        PMID: 23447454     DOI: 10.1002/adma.201205360

Source DB:  PubMed          Journal:  Adv Mater        ISSN: 0935-9648            Impact factor:   30.849


  21 in total

1.  Selective recognition of c-MYC Pu22 G-quadruplex by a fluorescent probe.

Authors:  Qianqian Zhai; Chao Gao; Jieqin Ding; Yashu Zhang; Barira Islam; Wenxian Lan; Haitao Hou; Hua Deng; Jun Li; Zhe Hu; Hany I Mohamed; Shengzhen Xu; Chunyang Cao; Shozeb M Haider; Dengguo Wei
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

2.  Split G-Quadruplexes Enhance Nanopore Signals for Simultaneous Identification of Multiple Nucleic Acids.

Authors:  Jinbo Zhu; Filip Bošković; Ulrich F Keyser
Journal:  Nano Lett       Date:  2022-06-07       Impact factor: 12.262

3.  G-quadruplex-generating polymerase chain reaction for visual colorimetric detection of amplicons.

Authors:  Sanchita Bhadra; Vlad Codrea; Andrew D Ellington
Journal:  Anal Biochem       Date:  2013-10-14       Impact factor: 3.365

4.  Chemically induced fluorescence switching of carbon-dots and its multiple logic gate implementation.

Authors:  Namasivayam Dhenadhayalan; King-Chuen Lin
Journal:  Sci Rep       Date:  2015-05-06       Impact factor: 4.379

5.  Multiple types of logic gates based on a single G-quadruplex DNA strand.

Authors:  Yahui Guo; Lu Zhou; Lijun Xu; Xiaodong Zhou; Jiming Hu; Renjun Pei
Journal:  Sci Rep       Date:  2014-12-04       Impact factor: 4.379

Review 6.  Aptamer Bioinformatics.

Authors:  Andrew B Kinghorn; Lewis A Fraser; Shaolin Lang; Simon Chi-Chin Shiu; Julian A Tanner
Journal:  Int J Mol Sci       Date:  2017-11-24       Impact factor: 5.923

7.  Controllable extension of hairpin-structured flaps to allow low-background cascade invasive reaction for a sensitive DNA logic sensor for mutation detection.

Authors:  Yun-Long Liu; Hai-Ping Wu; Qiang Zhou; Qin-Xin Song; Jian-Zhong Rui; Xiao-Xiang Guan; Guo-Hua Zhou; Bing-Jie Zou
Journal:  Chem Sci       Date:  2017-12-14       Impact factor: 9.825

8.  A Sweet Spot for Molecular Diagnostics: Coupling Isothermal Amplification and Strand Exchange Circuits to Glucometers.

Authors:  Yan Du; Randall A Hughes; Sanchita Bhadra; Yu Sherry Jiang; Andrew D Ellington; Bingling Li
Journal:  Sci Rep       Date:  2015-06-08       Impact factor: 4.379

9.  A Novel Computational Method to Reduce Leaky Reaction in DNA Strand Displacement.

Authors:  Xin Li; Xun Wang; Tao Song; Wei Lu; Zhihua Chen; Xiaolong Shi
Journal:  J Anal Methods Chem       Date:  2015-09-30       Impact factor: 2.193

10.  Target-driven DNA association to initiate cyclic assembly of hairpins for biosensing and logic gate operation.

Authors:  Yuehua Guo; Jie Wu; Huangxian Ju
Journal:  Chem Sci       Date:  2015-05-12       Impact factor: 9.825

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