| Literature DB >> 23441173 |
Caiyun Zhang1, Xicheng Song, Minhui Zhu, Song Shi, Meng Li, Lei Jin, Juntian Lang, Guojun Li, Hongliang Zheng.
Abstract
BACKGROUND: MMP1 is an important member of the MMP endopeptidase family that plays a critical role in the development of head and neck cancer (HNC). Several studies have investigated the association between the MMP1 -1607 1G>2G polymorphism and risk of HNC, but their results have been inconsistent. Here, we conducted a meta-analysis to further explore the role of the MMP1 -1607 1G>2G polymorphism in HNC development.Entities:
Mesh:
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Year: 2013 PMID: 23441173 PMCID: PMC3575339 DOI: 10.1371/journal.pone.0056294
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow diagram of study identification.
Characteristics of 12 case-control studies included in this meta-analysis.
| First author | Year | Ethnicity | Tumorsite | Sourceofcontrols | Cases | Controls | Genotypingmethod | PHWE
| ||||||
| N | 2G/2G | 1G/2G | 1G/1G | N | 2G/2G | 1G/2G | 1G/1G | |||||||
| Cao | 2006 | Asian | Oral cavity | HB | 96 | 55 | 33 | 8 | 120 | 41 | 54 | 25 | PCR-RFLP | 0.359 |
| Vairaktaris | 2007 | European | Oral cavity | HB | 156 | 52 | 68 | 36 | 141 | 60 | 57 | 24 | PCR-RFLP | 0.109 |
| Hashimoto | 2004 | Asian | Mixed HNC | HB | 140 | 75 | 48 | 17 | 223 | 95 | 104 | 24 | PCR-RFLP | 0.571 |
| Nishizawa | 2007 | Asian | Oral cavity | PB | 170 | 77 | 79 | 14 | 164 | 64 | 71 | 29 | PCR-RFLP | 0.235 |
| O-charoenrat | 2006 | Asian | Mixed HNC | HB | 300 | 149 | 97 | 54 | 300 | 89 | 150 | 61 | PCR-RFLP | 0.879 |
| Shimizu | 2008 | Asian | Oral cavity | HB | 69 | 37 | 22 | 10 | 91 | 36 | 46 | 9 | PCR-RFLP | 0.3 |
| Zinzindohoue | 2004 | European | Mixed HNC | HB | 125 | 18 | 66 | 41 | 249 | 66 | 126 | 57 | PCR-RFLP | 0.833 |
| Lin | 2004 | Asian | Oral cavity | HB | 121 | 57 | 54 | 10 | 147 | 63 | 60 | 24 | PCR | 0.14 |
| Kondo | 2005 | Asian | Nasopharynx | HB | 83 | 41 | 32 | 10 | 82 | 19 | 44 | 19 | PCR-RFLP | 0.508 |
| Nasr | 2007 | African | Nasopharynx | PB | 174 | 98 | 63 | 13 | 171 | 83 | 63 | 25 | PCR-RFLP | 0.029 |
| Zhou | 2007 | Asian | Nasopharynx | PB | 591 | 241 | 285 | 65 | 479 | 183 | 235 | 61 | PCR | 0.281 |
| Zhou | 2007 | Asian | Nasopharynx | PB | 238 | 113 | 96 | 29 | 280 | 110 | 132 | 38 | PCR | 0.872 |
HB: hospital-based,
PB: population-based,
HWE: Hardy–Weinberg equilibrium.
Stratified analysis of MMP1 -1607 1G>2G polymorphism and HNC risk.
| Variables | N | Recessive model (2G2G VS 1G2G+1G1G) | Dominant model(2G2G+1G2G VS 1G1G) | Allelic contrast model(2G VS 1G) | ||||||
| OR (95% CI) |
| I2 | OR (95% CI) |
| I2 | OR (95% CI) |
| I2 | ||
| Total | 12 | 1.38 | <0.001 | 76.8 | 1.25 | 0.002 | 61.8 | 1.27 | <0.001 | 77.8 |
| HWE | 11 | 1.39 | <0.001 | 78.9 | 1.20 | 0.004 | 61.5 | 1.25 | <0.001 | 79.4 |
| Ethnicity | ||||||||||
| Asian | 9 | 1.64 | 0.004 | 65 | 1.39(1.06, 1.82) | 0.084 | 42.6 | 1.41 | 0.019 | 56.3 |
| European | 2 | 0.58(0.40, 0.84) | 0.328 | 0 | 0.64(0.44, 0.92) | 0.759 | 0 | 0.68(0.54, 0.85) | 0.577 | 0 |
| African | 1 | 1.37(0.90, 2.09) | N/A | N/A | 2.12(1.05, 4.30) | N/A | N/A | 1.44(1.03, 2.00) | N/A | N/A |
| Source of control | ||||||||||
| HB | 8 | 1.45 | <0.001 | 84 | 1.12 | 0.005 | 65.9 | 1.27 | <0.001 | 84.9 |
| PB | 4 | 1.24(1.05, 1.47) | 0.702 | 0 | 1.48(1.04, 2.12) | 0.159 | 42.1 | 1.22(1.07, 1.38) | 0.375 | 3.6 |
| Tumor site | ||||||||||
| Oral cavity | 8 | 1.43 | 0.001 | 70.9 | N/A | N/A | N/A | N/A | N/A | N/A |
| Oropharynx/hypopharynx | 3 | 1.26 | 0.001 | 85.8 | N/A | N/A | N/A | N/A | N/A | N/A |
| Larynx | 3 | 1.28 | 0.018 | 75.2 | N/A | N/A | N/A | N/A | N/A | N/A |
| Nasopharynx | 4 | 1.47 | 0.031 | 66.1 | N/A | N/A | N/A | N/A | N/A | N/A |
Number of comparisons,
P-value for Q-test.
Random-effects model was used when P-value of Q-test for heterogeneity <0.05; otherwise fixed-effects model was used.
HB: hospital-based,
PB: population-based,
Statistically significant, with P<0.05.
Figure 2Forest plot for association between MMP1-1607 1G>2G and risk of HNC under the recessive model (2G/2G VS 1G/1G+1G/2G).
A random effects model was used. The squares and horizontal lines represent the study-specific OR and 95% CI. The diamonds correspond to the summary OR and 95% CI.
Figure 3Forest plot for association between MMP1-1607 1G>2G and risk of HNC under the allelic contrast model (2G VS 1G).
A random effects model was used. The squares and horizontal lines represent the study-specific OR and 95% CI. The diamonds correspond to the summary OR and 95% CI.
Figure 4Sensitivity analysis through deletion of one study at a time to reflect the influence of the individual dataset to the pooled ORs under the dominant model.
Figure 5Begg’s funnel plot for publication bias test.
Each point represents a separate study for the indicated association under the recessive model.