Literature DB >> 23438842

Exome sequencing is a useful diagnostic tool for complicated forms of hereditary spastic paraplegia.

C Bettencourt1, J L López-Sendón, J García-Caldentey, P Rizzu, I M C Bakker, O Shomroni, B Quintáns, J R Dávila, M R Bevova, M-J Sobrido, P Heutink, J G de Yébenes.   

Abstract

Hereditary spastic paraplegias constitute a heterogeneous group of neurodegenerative diseases encompassing pure and complicated forms, for which at least 52 loci and 31 causative genes have been identified. Although mutations in the SPAST gene explain approximately 40% of the pure autosomal dominant forms, molecular diagnosis can be challenging for the sporadic and recessive forms, which are often complicated and clinically overlap with a broad number of movement disorders. The validity of exome sequencing as a routine diagnostic approach in the movement disorder clinic needs to be assessed. The main goal of this study was to explore the usefulness of an exome analysis for the diagnosis of a complicated form of spastic paraplegia. Whole-exome sequencing was performed in two Spanish siblings with a neurodegenerative syndrome including upper and lower motor neuron, ocular and cerebellar signs. Exome sequencing revealed that both patients carry a novel homozygous nonsense mutation in exon 15 of the SPG11 gene (c.2678G>A; p.W893X), which was not found in 584 Spanish control chromosomes. After many years of follow-up and multiple time-consuming genetic testing, we were able to diagnose these patients by making use of whole-exome sequencing, showing that this is a cost-efficient diagnostic tool for the movement disorder specialist.
© 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  SPG11; genetic heterogeneity; molecular diagnosis; next-generation sequencing; spastic paraplegia; whole-exome sequencing

Mesh:

Substances:

Year:  2013        PMID: 23438842     DOI: 10.1111/cge.12133

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  13 in total

1.  Clinical and Neuropathological Features of Spastic Ataxia in a Spanish Family with Novel Compound Heterozygous Mutations in STUB1.

Authors:  Conceição Bettencourt; Justo García de Yébenes; José Luis López-Sendón; Orr Shomroni; Xingqian Zhang; Shu-Bing Qian; Ingrid M C Bakker; Sasja Heetveld; Raquel Ros; Beatriz Quintáns; María-Jesús Sobrido; Marianna R Bevova; Shushant Jain; Marianna Bugiani; Peter Heutink; Patrizia Rizzu
Journal:  Cerebellum       Date:  2015-06       Impact factor: 3.847

2.  Targeted next generation sequencing in SPAST-negative hereditary spastic paraplegia.

Authors:  Kishore R Kumar; Nicholas F Blair; Himesha Vandebona; Christina Liang; Karl Ng; David M Sharpe; Anne Grünewald; Uta Gölnitz; Viatcheslav Saviouk; Arndt Rolfs; Christine Klein; Carolyn M Sue
Journal:  J Neurol       Date:  2013-06-28       Impact factor: 4.849

3.  SPG11 Mutations Associated With a Complex Phenotype Resembling Dopa-Responsive Dystonia.

Authors:  Subhashie Wijemanne; Joshua M Shulman; Joohi Jimenez-Shahed; Daniel Curry; Joseph Jankovic
Journal:  Mov Disord Clin Pract       Date:  2015-04-28

4.  Exome sequencing expands the mutational spectrum of SPG8 in a family with spasticity responsive to L-DOPA treatment.

Authors:  Conceição Bettencourt; Huw R Morris; Andrew B Singleton; John Hardy; Henry Houlden
Journal:  J Neurol       Date:  2013-07-24       Impact factor: 4.849

5.  Interaction between AP-5 and the hereditary spastic paraplegia proteins SPG11 and SPG15.

Authors:  Jennifer Hirst; Georg H H Borner; James Edgar; Marco Y Hein; Matthias Mann; Frank Buchholz; Robin Antrobus; Margaret S Robinson
Journal:  Mol Biol Cell       Date:  2013-07-03       Impact factor: 4.138

6.  Dysfunction of spatacsin leads to axonal pathology in SPG11-linked hereditary spastic paraplegia.

Authors:  Francesc Pérez-Brangulí; Himanshu K Mishra; Iryna Prots; Steven Havlicek; Zacharias Kohl; Domenica Saul; Christine Rummel; Jonatan Dorca-Arevalo; Martin Regensburger; Daniela Graef; Elisabeth Sock; Juan Blasi; Teja W Groemer; Ursula Schlötzer-Schrehardt; Jürgen Winkler; Beate Winner
Journal:  Hum Mol Genet       Date:  2014-05-02       Impact factor: 6.150

Review 7.  An Update on the Hereditary Spastic Paraplegias: New Genes and New Disease Models.

Authors:  Kishore R Kumar; Nicholas F Blair; Carolyn M Sue
Journal:  Mov Disord Clin Pract       Date:  2015-06-02

8.  Identification of a de novo heterozygous missense FLNB mutation in lethal atelosteogenesis type I by exome sequencing.

Authors:  Ga Won Jeon; Mi-Na Lee; Ji Mi Jung; Seong Yeon Hong; Young Nam Kim; Jong Beom Sin; Chang-Seok Ki
Journal:  Ann Lab Med       Date:  2014-02-13       Impact factor: 3.464

9.  PhenoVar: a phenotype-driven approach in clinical genomics for the diagnosis of polymalformative syndromes.

Authors:  Yannis J Trakadis; Caroline Buote; Jean-François Therriault; Pierre-Étienne Jacques; Hugo Larochelle; Sébastien Lévesque
Journal:  BMC Med Genomics       Date:  2014-05-12       Impact factor: 3.063

10.  Targeted NGS meets expert clinical characterization: Efficient diagnosis of spastic paraplegia type 11.

Authors:  Cristina Castro-Fernández; Manuel Arias; Patricia Blanco-Arias; Luis Santomé-Collazo; Jorge Amigo; Ángel Carracedo; Maria-Jesús Sobrido
Journal:  Appl Transl Genom       Date:  2015-06-26
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