| Literature DB >> 23437407 |
Eduardo A Undurraga1, Yara A Halasa, Donald S Shepard.
Abstract
BACKGROUND: Dengue virus infection is the most common arthropod-borne disease of humans and its geographical range and infection rates are increasing. Health policy decisions require information about the disease burden, but surveillance systems usually underreport the total number of cases. These may be estimated by multiplying reported cases by an expansion factor (EF). METHODS ANDEntities:
Mesh:
Year: 2013 PMID: 23437407 PMCID: PMC3578761 DOI: 10.1371/journal.pntd.0002056
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Demographic characteristics (2010) and surveillance system of countries in Southeast Asia.
| Country | Population (1,000 s) | Urban pop. | GDP per capita (pc, US$) | Health expenditures (pc US$) | Physician density (10,000 pop) | Child mortality rate <5 yr | Neonatal mortality rate | Skilled attended births (%) | Surveillance system | Quality of surveillance | Lab capability | Reporting site | Reported ages | Peak incidence (ages | |
| DF | DHF | ||||||||||||||
| Bhutan | 708 | 30.9 | 2,010 | 92 | 0.2 | 81 | 35 | 51 | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. |
| Brunei | 401 | 75.7 | 28,832 | 844 | 14.2 | 7 | 3 | 99 | P | + | + + | S-V | OP&IP | All | 25–45 |
| Cambodia | 15,053 | 22.8 | 791 | 42 | 2.3 | 89 | 31 | 44 | P & St | + | + + | S-V | IP | 0–15 | 5–15 |
| East Timor | 1,177 | 28.1 | 571 | 66 | 1.0 | 93 | 43 | 19 | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | 0–5 |
| Indonesia | 232,517 | 53.7 | 2,890 | 57 | 2.9 | 41 | 19 | 73 | P | − | + + + | S-V | n.a. | All | 5–15 |
| Laos | 6,436 | 33.2 | 976 | 40 | 2.7 | 61 | 20 | 20 | P | + | + | S | n.a. | All | 5–15 |
| Malaysia | 27,914 | 72.2 | 8,184 | 320 | 9.4 | 6 | 3 | 99 | P & A | ++ | + + + | S-V | OP&IP | All | 25–45 |
| Myanmar | 50,496 | 33.9 | 721 | 14 | 4.6 | 122 | 48 | 57 | P | − | + + | S-V | IP | All | 5–15 |
| Philippines | 93,617 | 66.4 | 2,063 | 67 | 12.0 | 32 | 15 | 62 | P & St | + | + | S-V | OP&IP | All | 5–15 |
| Singapore | 5,076 | 100.0 | 41,893 | 1551 | 18.3 | 3 | 1 | 99 | P & A | +++ | + + + | S-V | OP&IP | All | 25–44 |
| Thailand | 68,139 | 34.0 | 4,850 | 162 | 3.0 | 14 | 10 | 99 | P | − | + + + | S-V | IP | All | 5–14 |
| Viet Nam | 89,029 | 28.8 | 1,141 | 78 | 12.2 | 14 | 9 | 88 | P & St | + | + ++ | S-V | OP&IP | All | 5–14 |
Data is an estimation for year 2010, except for Bhutan which corresponds to year 2005.
Average for 2005–2010, except for East Timor, Philippines, and Thailand which are the average (2000–2009).
P: Passive surveillance; St: Sentinel surveillance; A: Active surveillance.
Quality classification: + exists; ++ good; +++ best [6], [24].
S: serology; V: virology.
OP: outpatient; IP: inpatient.
Age category (in years) with peak incidence rate.
IMF estimate for 2010.
Gubler reports that both Singapore and Malaysia have active, laboratory based surveillance systems, although Malaysia is mostly passive and has reduced predictive capacity [24]. Both are considered passive systems by Beatty et al. [26].
n.a. denotes data not data not available.
Sources: [24], [26], [31], [36], [38], [45], [46], [54]–[60].
Figure 1.Totalreported dengue episodes in Southeast Asia, 1988–2010.
Sources: [11], [13], [29]–[33], [35]–[37].
Original, empirically derived expansion factors for countries in Southeast Asia.
| Country | Authors | Study years | Study sample | Study site | Methods | Expansion factors (EF) or relevant data | Dengue definition | OP∶IP ratio |
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| Cambodia | Wichmann et al. 2011 | 2006–2007 (includes epidemic year, 2007) | 9,000–10,000 children 0–19 yrs; | Kampong Cham Province: 20 rural and 5 urban villages | Cohort study, active surveillance. Comparison with surveillance data | EFT: 9.3; EFH: 1.4 | WHO clinical case definitions. Lab confirmed dengue. | Weighted OP∶IP in cohort: 7.5∶1 |
| Thailand | Wichmann et al. 2011 | Kamphaeng Phet (KP): 2004–2007(only dengue season); Ratchaburi (R): 2006–2007 (whole year) | KP: 2,000 children 4–13 yrs; R: 3,000 children 3–14 yrs | KP: 11 local primary schools; R: 7 local schools | Cohort studies, active surveillance; comparison with surveillance data | EFT: 8.4; EFH: 2.9 | WHO clinical case definitions. Lab confirmed dengue. | Weighted OP∶IP in cohort: KP: 3.9∶1; R: 0.8∶1; Overall: 2.4 |
| Cambodia | Vong et al. 2010 | 2006–2008 (includes epidemic year 2007) | 6,700–10,100 participants; 0–19 yrs | Kampong Cham Province: 32 villages and 10 urban areas | Cohort study, active surveillance. | 6.9 [Total lab confirmed sympt. cases/total hosp.] | Febrile episode, lab confirmed.; Hospitalized cases <16 yrs are reported. | Weighted OP∶IP in cohort: 5.0∶1 |
| Viet Nam | Tien et al. 2010 | 2004–2007 (includes epidemic year 2007) | 2,200–3,200 children | Long Xuyen: 3 nursery schools, 2 primary schools, and 1 secondary school | Cohort study, active surveillance. Comparison with surveillance data. | EFT: 5.8 | Clinical case definition. Lab confirmed dengue. | OP∶IP in cohort: 0.8∶1; asymptomatic to symptomatic ratio:5.3∶1 |
| Thailand | Anderson et al. 2007 | 1998–2002 (includes epidemic years 1998, 2001) | 2,200 children 5–15 yrs. | Kamphaeng Phet. 12 local primary schools | Cohort study, active surveillance. Lab confirmed dengue | 3.4 [lab confirmed dengue/hosp. dengue]; 1.4 [lab. Confirmed dengue/amb. dengue] | Febrile episode, lab confirmed dengue. | OP∶IP in cohort: 3.1∶1 |
| Indonesia | Porter et al. 2005 | 08/2000–07/2002 | 2,500 adults >18 yrs | Bandung, 2 textile factories | Cohort study, active surveillance. | 2.3 [lab confirmed dengue/hosp. dengue]; 1.8 [lab confirmed dengue/amb. dengue] | Febrile episode, lab confirmed dengue. | OP∶IP in cohort: 1.3∶1; asymptomatic to symptomatic ratio: 3.1∶1 |
| Cambodia | Vong et al. 2012 | 2006–2008 (includes epidemic year 2007) | 14,354 individuals <19 yrs | 32 villages and 10 urban areas, Kampong Cham | Capture-recapture study. Active surveillance and comparison to reported cases in surveillance system | EFT: 16.2; EFH: 2,0 | Febrile episode, lab confirmed dengue. | OP∶IP in cohort: 7,4∶1 |
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| Indonesia | Chairulfatah et al. 2001 | 04/1994–03/1995 (includes epidemic year 2005) | 650 hospitalized patients with DHF or DSS | 4 major hospitals in Bandung | Clinical surveillance for DHF, use of medical records for comparison to reported dengue in surveillance system | EFH: 3.3; EFdeath: 2.2 [total deaths from DHF&DSS/reported deaths] | Clinical DHF and DSS | |
| Viet Nam | Phuong et al. 2006 | 4/2001–3/2002 | 2,100 febrile patients | Binh Thuan Province: 12 community health posts (rural and urban) and one clinic in Phan Thiet (capital) | Clinical surveillance for febrile episodes | 5.2 [total lab confirmed dengue/total patients diagnosed with dengue] | Febrile episode, lab confirmed dengue. | |
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| Singapore | Yew et al. 2009 | 2004 (epidemic year) | 4,200 adults >18 yrs | Representative sample of Singapore, from National Health Survey 2004 | Representative survey, included blood samples. | 23 [lab confirmed dengue infection/reported dengue] | Lab confirmed cases (recent and past infections) | OP∶IP (from Low et al.'s |
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| Malaysia | Shepard et al. 2012 | 2009 | National population, combination of various data sources | Not applicable | 2-round Delphi process, including experts from private and public sectors, and academia | EFT: 3.8; EFH:1.7; EFA:65.4 | Officially reported dengue | OP∶IP derived Delphi process 1.4∶1 |
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| Cambodia [abstract] | Vong et al. 2007 | Not available | Children <15 yrs (n not available) | Not available | Capture-recapture study. Active surveillance and comparison to reported dengue in surveillance system | EFT: 3.1; EFH: 2.1 | Febrile episode, lab confirmed dengue. | OP∶IP in cohort: 1.2∶1 |
| Thailand [preliminary results] | Endy et al. 2002 | 1998–2000 | 2,200 children 5–15 yrs | Kamphaeng Phet: 12 local primary schools | Cohort study, active surveillance | 4.8 [total cases/hospitalized cases]; 1.3 [total cases/ambulatory cases] | Febrile episode, lab confirmed dengue | OP∶IP in cohort: 3.8∶1 Asymptomatic to symptomatic ratio: 1.2∶1 |
Cambodia reports only inpatients <16 years.
Ratio is number of number of dengue cases reported from outpatient (OP) clinics divided by the number from inpatient (IP) or hospitalized settings.
The study did not include all study villages and urban areas for the entire period.
EFs were obtained using the weighted averages, based on reported episodes from cohort by year.
Notation: DHF denotes dengue hemorrhagic fever; DSS denotes dengue shock syndrome.
Parameters used, sources, assumptions, and calculations by country.
| Country | Empirical parameters | Sources | Assumptions | Calculations |
| Cambodia | EFT; OP∶IP |
| RH = RT | NT = EFT*RT; NH = NT/(OP∶IP+1); NT = NH+NA |
| Thailand | EFH; OP∶IP; RH = 0.79*RT |
| RH = 0.79*RT | RH = RT*0.79; RT = RH+RA; NH = EFH* RH; NA = NH*OP∶IP; NT = NH+NA; EFA = NA/RA |
| Viet Nam | EFT; OP∶IP |
| OP ∶IP = average empirical OP∶IP | NT = EFT*RT; NH = NT/(OP∶IP+1); NT = NH+NA |
| Indonesia | EFH; NT = 2.3*NH |
| RH = RT; NT = 2.3*NH | NH = EFH* RH; EFT = 2.3*NH/RT; NT = EFT*RT; NT = NH+NA |
| Singapore | OP∶IP; 0.565*RT = RH; 1/23 infections notified; 18% of infections are symptomatic |
| EFH obtained was too high, so we used instead average empirical EFH; 0.565*RT = RH; 18% of infections are symptomatic | EFT = 23*0.18; NT = EFT*RT; RH = 0.565*RT; NH = NT/(OP∶IP+1); EFH = NH/RH→too high, i.e. EFH = average; NT = NH+NA; EFA = NA/RA |
| Malaysia | EFT, EFH, EFA |
| Explained in | NT = EFT*RT; NH = EFH* RH; NA = EFA* RA |
| Bhutan, East Timor, Myanmar | EFT | Regression estimates | RH = RT; EFH = average empirical EFH | RRT regression; EFT = (1/RRT); NT = EFT*RT; NH = EFH* RH; NT = NH+NA |
| Brunei, Laos, Philippines | EFT | Regression estimates | EFH = average empirical EFH OP∶IP = average empirical OP∶IP | RRT regression; EFT = (1/RRT); NT = EFT*RT; NH = NT/(OP∶IP+1); NT = NH+NA; RH = EFH/NH; EFA = NA/RA |
Notes: EFT = Expansion factor (EF) total dengue episodes; EFH = EF hospitalized episodes; EFA = EF ambulatory episodes; OP∶IP = outpatient to inpatient ratio of episodes; RT = total reported (R) episodes; RH = hospitalized R episodes; RA = ambulatory R episodes; NT = estimated total episodes; NH = estimated hospitalized episodes; NA = estimated ambulatory episodes; RRT = reporting rate of total episodes of dengue. In the main text the assumptions are numbered as (i) EFH = average of EFH from empirical studies in Cambodia, Thailand, Singapore, Indonesia, and Singapore, and (ii) OP∶IP = average of OP∶IP from available empirical studies [19], [20], [52], [63], [68].
Expansion factors for hospitalized (EFH), ambulatory (EFA) and total (EFT) dengue episodes, and average annual reported and estimated dengue episodes (2001–2010).
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| Country | EFH | EFA | EFT | Reported total | Sources of reported cases | Hospital | Ambulatory | Total | Hospital | Ambulatory |
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| Cambodia | 1.8 | n.r. | 12.9 | 14,407 |
| 14,407 | n.r. | 185,850 | 26,399 | 159,451 |
| (86,508–342,021) | (12,293–48,604) | (74,214–293,417) | ||||||||
| Thailand | 2.9 | 29.8 | 8.5 | 76,978 |
| 60,813 | 16,165 | 657,812 | 176,357 | 481,455 |
| (623,085–831,921) | (166,966–222,926) | (456,119–608,994) | ||||||||
| Viet Nam | 1.2 | n.r. | 5.8 | 76,364 |
| 76,364 | n.r. | 442,911 | 81,611 | 361,300 |
| (417,578–487,763) | (77,789–176,888) | (265,267–395,092) | ||||||||
| Indonesia | 3.3 | n.r. | 7.6 | 104,457 |
| 104,457 | n.r. | 792,829 | 344,708 | 448,121 |
| (752,863–932,674) | (215,528–352,837) | (418,376–650,432) | ||||||||
| Singapore | 2.5 | 5.0 | 4.1 | 6,362 |
| 3,595 | 2,767 | 26,339 | 8,986 | 17,352 |
| (14,331–30,256) | (5,426–11,415) | (5,242–22,700) | ||||||||
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| Malaysia | 1.7 | 65.6 | 3.8 | 37,866 |
| 36,622 | 1,244 | 143,891 | 62,256 | 81,635 |
| (106,427–203,914) | (42,285–101,885) | (25,207–144,506) | ||||||||
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| Bhutan | 2.5 | n.r. | 12.9 | 67 |
| 67 | n.r. | 866 | 168 | 699 |
| (372–1,366) | (101–213) | (211–1,213) | ||||||||
| Brunei | 2.5 | 6.2 | 4.9 | 72 |
| 26 | 46 | 351 | 65 | 286 |
| (303–399) | (35–209) | (142–339) | ||||||||
| East Timor | 2.5 | n.r. | 19 | 323 |
| 323 | n.r. | 6,137 | 808 | 5,330 |
| (536–18,150) | (486–1,025) | (255–17,385) | ||||||||
| Laos | 2.5 | 56.8 | 11.3 | 8,536 |
| 7,116 | 1,420 | 96,548 | 17,790 | 78,758 |
| (57,073–135,630) | (8,022–57,748) | (33,625–112,558) | ||||||||
| Myanmar | 2.5 | n.r. | 16.2 | 15,313 |
| 15,313 | n.r. | 247,943 | 38,283 | 209,660 |
| (35,327–517,378) | (22,882–48,593) | (1,368–481,694) | ||||||||
| Philippines | 2.5 | 11.7 | 7 | 45,409 |
| 23,283 | 22,126 | 315,892 | 58,207 | 257,685 |
| (271,244–360,043) | (31,361–185,358) | (129,613–305,917) | ||||||||
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| 2.4 | 48 | 7.6 | 386,154 | 342,384 | 43,770 | 2,917,368 | 815,636 | 2,101,732 | |
| (2,722,270–3,378,463) | (715,326–983,735) | (1,871,480–2,534,739) | ||||||||
EFs for the lower panel -based on extrapolations from neighboring countries - were estimated under the following assumptions: (i) EFH was constant and equal to the average EFH of countries in the region for which we had empirical evidence (EFH = 2.5); (ii) to estimate EFA for Bhutan, Laos, and Philippines, we also assumed that the OP∶IP episodes ratio was, on average, constant for these countries and equal to the weighted average from all empirical studies in the region (OP∶IP = 4.4).
n.r. denotes not reported; SEA denotes Southeast Asia.
The 95% certainty level reported in parentheses was estimated by a probabilistic sensitivity analysis simultaneously varying key parameters in 20,000 Monte Carlo simulations (see Table 5 to see specific parameters and distributions used for each factor in the sensitivity analysis).
We obtained an empirical estimate for EFH of 3.4 in Singapore; however, given legal requirements and incentives for reporting, we think that this estimate may be too high. The main reason for underreporting of dengue in hospitals seems to be under diagnosis, as patients with undifferentiated fever are not routinely tested, or are tested with serological that may not pick up dengue. An additional factor behind underreporting may be underreporting in the private sector [67], which accounted for about 23 of hospitalizations in Singapore (2009–2011; Ministry of Health Singapore). To be conservative, we used the average for countries with empirical studies (2.5), and used 3.4 as the upper bound in the sensitivity analysis, as shown in Table 5.
Summary of parameters varied simultaneously in sensitivity analysis and their assumed distributions.
| Country | Parameter | Estimate | Distribution | Distribution parameters | Values | Source |
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| Cambodia | EFT | 12.9 | PERT | (Min; Best; Max) | (3.9; 12.9; 29.3) | Empirical best estimate, range from empirical studies |
| OP∶IP | 6.0 | Normal | (μ, σ) | (6.0; 1.2) | Weighted average from empirical studies in Cambodia | |
| Thailand | EFT | 8.5 | PERT | (Min; Best; Max) | (8.0; 8.5; 12.5) | Empirical best estimate, range from empirical studies |
| OP∶IP | 2.7 | Normal | (μ, σ) | (2.7; 1.1) | Weighted average from empirical studies in Thailand | |
| Viet Nam | EFT | 5.8 | PERT | (Min; Best; Max) | (5.4; 5.8; 6.7) | Empirical estimate & 95%PI from regression |
| EFH | 1.2 | PERT | (Min; Best; Max) | (1.0; 1.2; 3.4) | Empirical estimate, conservative assumption (lower bound) & highest empirical estimate (upper bound) | |
| Indonesia | EFT | 7.6 | PERT | (Min; Best; Max) | (7.1; 7.6; 9.9) | Empirical estimate & 95%PI from regression |
| EFH | 3.3 | PERT | (Min; Best; Max) | (1.0; 3.3; 3.4) | Empirical estimate, conservative assumption (lower bound) & highest empirical estimate (upper bound) | |
| Singapore | EFT | 4.1 | PERT | (Min; Best; Max) | (1.0; 4.1; 4.9) | Empirical estimate, conservative assumption (lower bound) & 95%PI from regression (upper bound) |
| EFH | 2.5 | PERT | (Min; Best; Max) | (1.0; 2.5; 3.4) | Empirical estimate, conservative assumption (lower bound) & highest empirical estimate (upper bound) | |
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| Malaysia | EFT | 3.8 | PERT | (Min; Best; Max) | (2.5; 3.8; 6.2) | Expert opinion (lower bound and best estimate) & 95%PI from regression (upper bound) |
| EFH | 1.7 | PERT | (Min; Best; Max) | (1.0; 1.7; 3.4) | Empirical estimate, conservative assumption (lower bound) & highest empirical estimate (upper bound) | |
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| All countries | EFH | 2.5 | PERT | (Min; Best; Max) | (1.0; 2.5; 3.4) | Conservative assumption (lower bound), average (best) & highest empirical estimate (upper bound) |
| All countries | OP∶IP | 4.4 | Normal | (μ, σ) | (4.4; 2.2) | Weighted average and standard deviation (s.d.) from empirical estimates |
| Bhutan | EFT | 12.9 | Normal | (μ, σ) | (12.9; 3.8) | Predicted EFT & s.d. from regression |
| Brunei | EFT | 4.9 | Normal | (μ, σ) | (4.9; 0.3) | Predicted EFT & s.d. from regression |
| East Timor | EFT | 19.0 | Normal | (μ, σ) | (19.0; 18.2) | Predicted EFT & s.d. from regression |
| Laos | EFT | 11.3 | Normal | (μ, σ) | (11.3; 2.3) | Predicted EFT & s.d. from regression |
| Myanmar | EFT | 16.2 | Normal | (μ, σ) | (16.2; 8.9) | Predicted EFT & s.d. from regression |
| Philippines | EFT | 7.0 | Normal | (μ, σ) | (7.0; 0.5) | Predicted EFT & s.d. from regression |
We used λ = 4 in all PERT distributions, to approximate the shape of a Normal distribution. We did an additional sensitivity analysis using triangular distributions (lower bound, best estimate, upper bound) instead of PERT distributions.
The lower bound of the 95% predicted interval for Singapore was truncated at 1.0. Because we are dealing pooled EFT over a series of years, we would expect 1.0 to be the minimum plausible EFT. Although it is conceptually possible that EFT might be <1 for a specific region or period of time (e.g., during a dengue outbreak), the reporting in the ambulatory sector is so incomplete that while outbreaks happen periodically, we think it is conservative to assume 1 as a lower bound.
To be conservative, the lower bound of the PERT distribution for Malaysia is based the lower bound derived from a Delphi process in Malaysia by Shepard et al.[67]. We did not use the lower bound from the 95% CI of the regression (EFT = 5.0) because it is higher than the best estimate available (EFT = 3.8).
Notation: EFT denotes expansion factors for total dengue episodes; EFH denotes expansion factors for hospitalized dengue episodes; OP∶IP denotes outpatient to inpatient ratio; PERT denotes the distribution used in program evaluation and review technique; μ denotes mean;, σ denotes standard deviation; PI denotes prediction interval.
Figure 2Empirical and predicted reporting rates for total dengue and Health Quality Index in Southeast Asia and the Americas.
Source: Authors' calculations from [17]–[20], [24], [26], [31], [36], [38], [40], [45], [46], [48], [53]–[67].