Literature DB >> 23435117

Does random tree puzzle produce Yule-Harding trees in the many-taxon limit?

Sha Zhu1, Mike Steel.   

Abstract

It has been suggested that a random tree puzzle (RTP) process leads to a Yule-Harding (YH) distribution, when the number of taxa becomes large. In this study, we formalize this conjecture, and we prove that the two tree distributions converge for two particular properties, which suggests that the conjecture may be true. However, we present statistical evidence that, while the two distributions are close, the RTP appears to converge on a different distribution than does the YH. By way of contrast, in the concluding section we show that the maximum parsimony method applied to random two-state data leads a very different (PDA, or uniform) distribution on trees.
Copyright © 2013 Elsevier Inc. All rights reserved.

Mesh:

Year:  2013        PMID: 23435117     DOI: 10.1016/j.mbs.2013.02.003

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  1 in total

1.  Maximum Parsimony and the Skewness Test: A Simulation Study of the Limits of Applicability.

Authors:  Jussi Määttä; Teemu Roos
Journal:  PLoS One       Date:  2016-04-01       Impact factor: 3.240

  1 in total

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