Literature DB >> 23424579

1-(4-{2-[(E)-3-(4-Chloro-phen-yl)-3-oxo-prop-1-en-1-yl]phen-oxy}but-yl)-1H-indole-3-carbaldehyde.

S Paramasivam1, Santhanagopalan Purushothaman, P R Seshadri, Raghavachary Raghunathan.   

Abstract

In the title compound, C(28)H(24)ClNO(3), the dihedral angles between the central n class="Chemical">benzene ring and the indole ring system and the chlorobenzene ring are 70.81 (5) and 78.62 (5)°, respectively. The mol-ecular structure is stabilized by a weak intra-molecular C-H⋯O inter-action. In the crystal, pairs of C-H⋯O hydrogen bonds link the mol-ecules into inversion dimers with an R(2) (2)(14) motif.

Entities:  

Year:  2013        PMID: 23424579      PMCID: PMC3569833          DOI: 10.1107/S1600536813002456

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of indole derivatives, see: Olgen & Coban (2003 ▶); Ho et al. (1986 ▶); Joshi & Chand (1982 ▶); Rodriguez et al. (1985 ▶); Okabe & Adachi (1998 ▶); Merck (1973 ▶). For N-atom hybridization, see: Beddoes et al. (1986 ▶). For a related structure, see: Paramasivam et al. (2012 ▶). For graph-set notation see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C28H24ClNO3 M = 457.93 Monoclinic, a = 8.7126 (3) Å b = 19.1311 (6) Å c = 13.9338 (4) Å β = 93.198 (2)° V = 2318.89 (13) Å3 Z = 4 Mo Kα radiation μ = 0.20 mm−1 T = 298 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEXII area-detector diffractometer 22253 measured reflections 5782 independent reflections 4060 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.145 S = 1.03 5782 reflections 298 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.46 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windowa (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97, PLATON and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813002456/kp2444sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813002456/kp2444Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813002456/kp2444Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H24ClNO3F(000) = 960
Mr = 457.93monoclinic
Monoclinic, P21/nDx = 1.312 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 8.7126 (3) ÅCell parameters from 5782 reflections
b = 19.1311 (6) Åθ = 1.8–28.3°
c = 13.9338 (4) ŵ = 0.20 mm1
β = 93.198 (2)°T = 298 K
V = 2318.89 (13) Å3Block, colourless
Z = 40.20 × 0.20 × 0.20 mm
Bruker SMART APEXII area-detector diffractometer4060 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
Graphite monochromatorθmax = 28.3°, θmin = 1.8°
ω and φ scansh = −8→11
22253 measured reflectionsk = −25→21
5782 independent reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.145H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0591P)2 + 0.7822P] where P = (Fo2 + 2Fc2)/3
5782 reflections(Δ/σ)max < 0.001
298 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.0037 (3)0.70610 (12)0.90463 (15)0.0675 (5)
C20.0110 (3)0.63646 (12)0.88447 (16)0.0743 (6)
H2−0.03510.61770.82840.089*
C30.0951 (3)0.59454 (11)0.94836 (14)0.0656 (5)
H30.10710.54740.93410.079*
C40.1623 (2)0.62099 (10)1.03343 (13)0.0526 (4)
C50.1383 (3)0.69100 (11)1.05371 (16)0.0700 (6)
H50.17810.70951.11160.084*
C60.0566 (3)0.73364 (12)0.98970 (18)0.0776 (7)
H60.04230.78061.00390.093*
C70.2526 (2)0.57743 (10)1.10492 (13)0.0559 (4)
C80.3047 (2)0.50761 (10)1.07578 (13)0.0552 (4)
H80.28420.49261.01290.066*
C90.3803 (2)0.46590 (9)1.13797 (12)0.0488 (4)
H90.39430.48421.19970.059*
C100.44511 (19)0.39676 (9)1.12663 (11)0.0450 (4)
C110.5351 (2)0.36906 (10)1.20364 (12)0.0535 (4)
H110.55110.39581.25900.064*
C120.6008 (3)0.30409 (11)1.20085 (14)0.0647 (5)
H120.66050.28741.25330.078*
C130.5775 (3)0.26396 (11)1.11985 (15)0.0688 (6)
H130.62210.21991.11740.083*
C140.4884 (3)0.28835 (10)1.04196 (13)0.0609 (5)
H140.47230.26040.98780.073*
C150.4230 (2)0.35419 (9)1.04394 (11)0.0472 (4)
C160.2994 (3)0.33837 (10)0.88721 (13)0.0632 (5)
H16A0.24910.29580.90630.076*
H16B0.39210.32600.85580.076*
C170.1931 (3)0.38074 (11)0.82024 (13)0.0612 (5)
H17A0.15200.35060.76900.073*
H17B0.10740.39730.85560.073*
C180.2704 (2)0.44254 (11)0.77648 (12)0.0571 (5)
H18A0.35090.42580.73700.068*
H18B0.31830.47080.82760.068*
C190.1603 (2)0.48804 (10)0.71534 (12)0.0583 (5)
H19A0.08240.50640.75560.070*
H19B0.21670.52740.69110.070*
C20−0.0653 (2)0.43252 (9)0.62598 (12)0.0485 (4)
H20−0.13540.44000.67290.058*
C21−0.09949 (19)0.40123 (9)0.53853 (11)0.0445 (4)
C22−0.2501 (2)0.37870 (11)0.50518 (14)0.0564 (5)
H22−0.32840.38320.54750.068*
C230.04045 (18)0.39990 (8)0.48909 (11)0.0404 (3)
C240.15337 (18)0.43141 (8)0.55073 (11)0.0420 (3)
C250.3043 (2)0.43976 (10)0.52522 (13)0.0526 (4)
H250.37790.46090.56650.063*
C260.3401 (2)0.41551 (11)0.43653 (14)0.0596 (5)
H260.44000.42070.41720.071*
C270.2308 (2)0.38327 (11)0.37477 (13)0.0583 (5)
H270.25940.36680.31550.070*
C280.0807 (2)0.37520 (10)0.39963 (11)0.0492 (4)
H280.00820.35380.35780.059*
N10.08465 (17)0.45088 (7)0.63409 (9)0.0469 (3)
O10.2827 (2)0.59973 (9)1.18603 (10)0.0837 (5)
O20.33578 (16)0.38163 (6)0.96938 (8)0.0570 (3)
O3−0.28421 (16)0.35426 (9)0.42671 (11)0.0757 (4)
Cl1−0.10168 (10)0.76018 (4)0.82139 (5)0.1058 (3)
U11U22U33U12U13U23
C10.0800 (14)0.0584 (12)0.0639 (12)0.0172 (11)0.0030 (10)−0.0019 (10)
C20.0966 (17)0.0648 (14)0.0599 (12)0.0149 (12)−0.0089 (11)−0.0127 (10)
C30.0897 (15)0.0488 (11)0.0576 (11)0.0095 (10)−0.0022 (10)−0.0117 (9)
C40.0585 (10)0.0466 (10)0.0532 (9)0.0020 (8)0.0097 (8)−0.0081 (8)
C50.0835 (15)0.0548 (12)0.0704 (13)0.0083 (11)−0.0079 (11)−0.0187 (10)
C60.0954 (17)0.0479 (12)0.0880 (16)0.0151 (11)−0.0086 (13)−0.0162 (11)
C70.0657 (11)0.0528 (11)0.0494 (9)0.0014 (9)0.0058 (8)−0.0109 (8)
C80.0714 (12)0.0496 (11)0.0441 (9)0.0032 (9)−0.0005 (8)−0.0074 (8)
C90.0542 (10)0.0505 (10)0.0416 (8)−0.0067 (8)0.0022 (7)−0.0085 (7)
C100.0502 (9)0.0462 (9)0.0384 (7)−0.0065 (7)0.0006 (6)−0.0016 (7)
C110.0612 (11)0.0578 (11)0.0405 (8)−0.0055 (9)−0.0066 (7)−0.0034 (8)
C120.0793 (14)0.0593 (12)0.0532 (10)0.0047 (10)−0.0170 (9)0.0061 (9)
C130.0935 (15)0.0495 (12)0.0615 (11)0.0115 (11)−0.0135 (11)0.0028 (9)
C140.0893 (14)0.0453 (10)0.0466 (9)0.0052 (10)−0.0090 (9)−0.0045 (8)
C150.0603 (10)0.0439 (9)0.0369 (7)−0.0039 (8)−0.0040 (7)0.0006 (7)
C160.0968 (15)0.0458 (10)0.0446 (9)−0.0043 (10)−0.0178 (9)−0.0066 (8)
C170.0779 (13)0.0559 (12)0.0475 (9)−0.0123 (10)−0.0173 (9)−0.0022 (8)
C180.0674 (11)0.0611 (12)0.0414 (8)−0.0094 (9)−0.0101 (8)−0.0029 (8)
C190.0799 (13)0.0482 (11)0.0452 (9)−0.0041 (9)−0.0111 (9)−0.0047 (8)
C200.0539 (10)0.0498 (10)0.0417 (8)0.0056 (8)0.0022 (7)0.0074 (7)
C210.0471 (9)0.0440 (9)0.0415 (8)0.0005 (7)−0.0035 (6)0.0086 (7)
C220.0489 (10)0.0632 (12)0.0565 (10)−0.0022 (8)−0.0014 (8)0.0116 (9)
C230.0458 (8)0.0368 (8)0.0377 (7)0.0003 (6)−0.0057 (6)0.0084 (6)
C240.0482 (9)0.0373 (8)0.0397 (7)0.0006 (7)−0.0046 (6)0.0060 (6)
C250.0482 (9)0.0525 (11)0.0560 (10)−0.0046 (8)−0.0082 (7)0.0065 (8)
C260.0476 (10)0.0700 (13)0.0613 (11)0.0019 (9)0.0047 (8)0.0082 (10)
C270.0614 (11)0.0666 (13)0.0473 (9)0.0066 (9)0.0075 (8)0.0010 (8)
C280.0569 (10)0.0498 (10)0.0401 (8)0.0007 (8)−0.0051 (7)0.0022 (7)
N10.0575 (8)0.0443 (8)0.0380 (7)0.0004 (6)−0.0065 (6)0.0009 (6)
O10.1221 (14)0.0712 (10)0.0562 (8)0.0217 (9)−0.0091 (8)−0.0221 (7)
O20.0842 (9)0.0449 (7)0.0396 (6)0.0066 (6)−0.0160 (6)−0.0055 (5)
O30.0594 (8)0.1004 (12)0.0651 (9)−0.0151 (8)−0.0157 (7)−0.0039 (8)
Cl10.1481 (7)0.0834 (5)0.0832 (4)0.0471 (5)−0.0170 (4)−0.0014 (3)
C1—C21.369 (3)C16—C171.513 (3)
C1—C61.374 (3)C16—H16A0.9700
C1—Cl11.742 (2)C16—H16B0.9700
C2—C31.378 (3)C17—C181.506 (3)
C2—H20.9300C17—H17A0.9700
C3—C41.388 (3)C17—H17B0.9700
C3—H30.9300C18—C191.520 (3)
C4—C51.387 (3)C18—H18A0.9700
C4—C71.489 (3)C18—H18B0.9700
C5—C61.377 (3)C19—N11.462 (2)
C5—H50.9300C19—H19A0.9700
C6—H60.9300C19—H19B0.9700
C7—O11.223 (2)C20—N11.352 (2)
C7—C81.475 (3)C20—C211.375 (2)
C8—C91.326 (3)C20—H200.9300
C8—H80.9300C21—C231.434 (2)
C9—C101.450 (3)C21—C221.434 (2)
C9—H90.9300C22—O31.211 (2)
C10—C111.398 (2)C22—H220.9300
C10—C151.415 (2)C23—C281.396 (2)
C11—C121.370 (3)C23—C241.405 (2)
C11—H110.9300C24—N11.387 (2)
C12—C131.371 (3)C24—C251.390 (2)
C12—H120.9300C25—C261.372 (3)
C13—C141.380 (3)C25—H250.9300
C13—H130.9300C26—C271.392 (3)
C14—C151.383 (3)C26—H260.9300
C14—H140.9300C27—C281.380 (3)
C15—O21.3583 (19)C27—H270.9300
C16—O21.434 (2)C28—H280.9300
C2—C1—C6121.0 (2)H16A—C16—H16B108.6
C2—C1—Cl1119.29 (18)C18—C17—C16113.45 (17)
C6—C1—Cl1119.75 (17)C18—C17—H17A108.9
C1—C2—C3119.1 (2)C16—C17—H17A108.9
C1—C2—H2120.5C18—C17—H17B108.9
C3—C2—H2120.5C16—C17—H17B108.9
C2—C3—C4121.55 (19)H17A—C17—H17B107.7
C2—C3—H3119.2C17—C18—C19113.20 (16)
C4—C3—H3119.2C17—C18—H18A108.9
C5—C4—C3117.70 (19)C19—C18—H18A108.9
C5—C4—C7118.95 (17)C17—C18—H18B108.9
C3—C4—C7123.30 (17)C19—C18—H18B108.9
C6—C5—C4121.2 (2)H18A—C18—H18B107.8
C6—C5—H5119.4N1—C19—C18113.48 (15)
C4—C5—H5119.4N1—C19—H19A108.9
C1—C6—C5119.4 (2)C18—C19—H19A108.9
C1—C6—H6120.3N1—C19—H19B108.9
C5—C6—H6120.3C18—C19—H19B108.9
O1—C7—C8121.14 (18)H19A—C19—H19B107.7
O1—C7—C4120.06 (17)N1—C20—C21110.35 (15)
C8—C7—C4118.80 (15)N1—C20—H20124.8
C9—C8—C7120.95 (16)C21—C20—H20124.8
C9—C8—H8119.5C20—C21—C23106.59 (14)
C7—C8—H8119.5C20—C21—C22124.54 (17)
C8—C9—C10131.29 (16)C23—C21—C22128.79 (16)
C8—C9—H9114.4O3—C22—C21125.64 (18)
C10—C9—H9114.4O3—C22—H22117.2
C11—C10—C15116.86 (16)C21—C22—H22117.2
C11—C10—C9117.85 (15)C28—C23—C24119.25 (15)
C15—C10—C9125.28 (15)C28—C23—C21134.26 (15)
C12—C11—C10122.66 (17)C24—C23—C21106.49 (14)
C12—C11—H11118.7N1—C24—C25129.92 (15)
C10—C11—H11118.7N1—C24—C23107.87 (14)
C11—C12—C13119.26 (18)C25—C24—C23122.20 (15)
C11—C12—H12120.4C26—C25—C24117.22 (17)
C13—C12—H12120.4C26—C25—H25121.4
C12—C13—C14120.61 (19)C24—C25—H25121.4
C12—C13—H13119.7C25—C26—C27121.62 (18)
C14—C13—H13119.7C25—C26—H26119.2
C13—C14—C15120.43 (17)C27—C26—H26119.2
C13—C14—H14119.8C28—C27—C26121.32 (17)
C15—C14—H14119.8C28—C27—H27119.3
O2—C15—C14123.39 (15)C26—C27—H27119.3
O2—C15—C10116.42 (15)C27—C28—C23118.38 (16)
C14—C15—C10120.19 (16)C27—C28—H28120.8
O2—C16—C17106.49 (16)C23—C28—H28120.8
O2—C16—H16A110.4C20—N1—C24108.69 (14)
C17—C16—H16A110.4C20—N1—C19125.67 (15)
O2—C16—H16B110.4C24—N1—C19125.58 (15)
C17—C16—H16B110.4C15—O2—C16118.49 (14)
C6—C1—C2—C3−3.7 (4)C17—C18—C19—N1−60.3 (2)
Cl1—C1—C2—C3176.83 (19)N1—C20—C21—C230.29 (19)
C1—C2—C3—C41.4 (4)N1—C20—C21—C22−176.78 (16)
C2—C3—C4—C51.9 (3)C20—C21—C22—O3176.1 (2)
C2—C3—C4—C7179.3 (2)C23—C21—C22—O3−0.3 (3)
C3—C4—C5—C6−2.9 (3)C20—C21—C23—C28179.59 (18)
C7—C4—C5—C6179.5 (2)C22—C21—C23—C28−3.5 (3)
C2—C1—C6—C52.7 (4)C20—C21—C23—C24−0.24 (18)
Cl1—C1—C6—C5−177.9 (2)C22—C21—C23—C24176.67 (17)
C4—C5—C6—C10.7 (4)C28—C23—C24—N1−179.75 (14)
C5—C4—C7—O112.0 (3)C21—C23—C24—N10.11 (17)
C3—C4—C7—O1−165.4 (2)C28—C23—C24—C250.9 (2)
C5—C4—C7—C8−167.82 (19)C21—C23—C24—C25−179.28 (15)
C3—C4—C7—C814.8 (3)N1—C24—C25—C26−179.55 (17)
O1—C7—C8—C92.8 (3)C23—C24—C25—C26−0.3 (3)
C4—C7—C8—C9−177.42 (18)C24—C25—C26—C27−0.6 (3)
C7—C8—C9—C10−178.63 (18)C25—C26—C27—C280.9 (3)
C8—C9—C10—C11172.6 (2)C26—C27—C28—C23−0.3 (3)
C8—C9—C10—C15−8.3 (3)C24—C23—C28—C27−0.5 (2)
C15—C10—C11—C120.3 (3)C21—C23—C28—C27179.67 (18)
C9—C10—C11—C12179.50 (18)C21—C20—N1—C24−0.22 (19)
C10—C11—C12—C13−0.3 (3)C21—C20—N1—C19177.14 (15)
C11—C12—C13—C14−0.3 (4)C25—C24—N1—C20179.39 (17)
C12—C13—C14—C150.9 (4)C23—C24—N1—C200.06 (18)
C13—C14—C15—O2179.22 (19)C25—C24—N1—C192.0 (3)
C13—C14—C15—C10−0.9 (3)C23—C24—N1—C19−177.31 (15)
C11—C10—C15—O2−179.82 (15)C18—C19—N1—C20109.0 (2)
C9—C10—C15—O21.1 (3)C18—C19—N1—C24−74.1 (2)
C11—C10—C15—C140.3 (3)C14—C15—O2—C165.0 (3)
C9—C10—C15—C14−178.79 (18)C10—C15—O2—C16−174.84 (17)
O2—C16—C17—C1868.2 (2)C17—C16—O2—C15176.03 (16)
C16—C17—C18—C19−175.60 (16)
D—H···AD—HH···AD···AD—H···A
C8—H8···O20.932.262.850 (2)121
C9—H9···O10.932.422.791 (2)104
C20—H20···O1i0.932.523.374 (2)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8⋯O20.932.262.850 (2)121
C20—H20⋯O1i 0.932.523.374 (2)152

Symmetry code: (i) .

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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