Literature DB >> 23424557

Benzyl 2-(benzylsulfanyl)benzoate.

Zorica Leka1, Sladjana B Novaković, Goran A Bogdanović, Gordana P Radić, Zoran R Ratković.   

Abstract

In the title compound, C(21)H(18)O(2)S, the central aromatic ring makes dihedral angles of 5.86 (12) and 72.02 (6)° with the rings of the terminal O-benzyl and S-benzyl groups, respectively. The dihedral angle between the peripheral phenyl rings is 66.16 (6)°. In the crystal, mol-ecules are linked by pairs of C-H⋯O hydrogen bonds, forming inversion dimers. These dimers are linked via C-H⋯π inter-actions, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 23424557      PMCID: PMC3569811          DOI: 10.1107/S1600536813001761

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Radić et al. (2012 ▶); Lucena et al. (1996 ▶); Sillanpää et al. (1994 ▶); Alhadi et al. (2010 ▶). For the biological activity of thio­salicylic acid derivatives, see: Bernardelli et al. (2005 ▶); Halaschek-Wiener et al. (2003 ▶); Sadao et al. (2000 ▶).

Experimental

Crystal data

C21H18O2S M = 334.41 Triclinic, a = 5.6957 (3) Å b = 12.1117 (11) Å c = 13.0813 (11) Å α = 72.748 (8)° β = 86.477 (6)° γ = 89.941 (6)° V = 860.04 (12) Å3 Z = 2 Cu Kα radiation μ = 1.74 mm−1 T = 293 K 0.11 × 0.10 × 0.05 mm

Data collection

Oxford Diffraction Xcalibur Gemini Sapphire3 diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2012 ▶) T min = 0.944, T max = 1.000 5368 measured reflections 3299 independent reflections 2554 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.113 S = 1.04 3299 reflections 217 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶), PLATON (Spek, 2009) ▶ and PARST (Nardelli, 1995 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813001761/rz5036sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813001761/rz5036Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813001761/rz5036Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H18O2SZ = 2
Mr = 334.41F(000) = 352
Triclinic, P1Dx = 1.291 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54180 Å
a = 5.6957 (3) ÅCell parameters from 2123 reflections
b = 12.1117 (11) Åθ = 3.5–72.3°
c = 13.0813 (11) ŵ = 1.74 mm1
α = 72.748 (8)°T = 293 K
β = 86.477 (6)°Prism, colourless
γ = 89.941 (6)°0.11 × 0.10 × 0.05 mm
V = 860.04 (12) Å3
Oxford Diffraction Xcalibur Gemini Sapphire3 diffractometer3299 independent reflections
Radiation source: Enhance (Cu) X-ray Source2554 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.018
Detector resolution: 16.3280 pixels mm-1θmax = 72.4°, θmin = 3.6°
ω scansh = −5→7
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2012)k = −14→14
Tmin = 0.944, Tmax = 1.000l = −16→15
5368 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0493P)2 + 0.0651P] where P = (Fo2 + 2Fc2)/3
3299 reflections(Δ/σ)max < 0.001
217 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.21 e Å3
Experimental. IR (KBr, cm-1): 3414, 3061, 2920, 2648, 2559, 1674, 1584, 1562, 1463, 1412, 1317, 1272, 1255, 1154, 1062, 1046, 897, 743, 711, 652, 551. 1H NMR (200 MHz, CDCl3, δ p.p.m.): 4.11 (s, 2H, C15H2), 5.45 (s, 2H, C8H2), 7.00–7.93 (m, 17H, Ar and bz). 13C NMR (50 MHz, DMSO-d6, δ p.p.m.): 38.5 (C15H2), 68.3 (C8H2) 125.0; 126.3; 126.8; 127.0; 127.2; 127.5; 127.8; 127.9; 128.1; 128.3; 128.8; 128.9, 129.3; 130.2; 133.5; 139.5; 141.7; 142.3 (Ar and bz), 166.8 (COObz).
xyzUiso*/Ueq
S10.60616 (9)0.22258 (5)0.48163 (4)0.06178 (18)
O10.1278 (2)0.47589 (12)0.28903 (10)0.0595 (4)
O20.2518 (3)0.37675 (15)0.44697 (11)0.0859 (6)
C10.2696 (3)0.40163 (17)0.35128 (15)0.0549 (5)
C20.4509 (3)0.35644 (16)0.28855 (14)0.0519 (4)
C30.6149 (3)0.27491 (16)0.34054 (14)0.0519 (4)
C40.7850 (4)0.23806 (19)0.27595 (16)0.0632 (5)
H40.89450.18380.30810.076*
C50.7919 (4)0.2808 (2)0.16621 (17)0.0728 (6)
H50.90720.25550.12530.087*
C60.6324 (4)0.3601 (2)0.11575 (17)0.0743 (6)
H60.63880.38850.04130.089*
C70.4622 (4)0.39694 (19)0.17718 (15)0.0650 (5)
H70.35250.45010.14330.078*
C8−0.0440 (4)0.53023 (19)0.34328 (15)0.0602 (5)
H8A0.03480.57510.38170.072*
H8B−0.14260.47180.39460.072*
C9−0.1923 (3)0.60777 (16)0.26112 (15)0.0522 (4)
C10−0.1380 (4)0.6363 (2)0.15204 (16)0.0659 (6)
H10−0.00310.60730.12640.079*
C11−0.2821 (4)0.7076 (2)0.08082 (17)0.0725 (6)
H11−0.24370.72600.00750.087*
C12−0.4810 (4)0.7514 (2)0.11702 (18)0.0712 (6)
H12−0.57800.79900.06860.085*
C13−0.5362 (4)0.7247 (2)0.22537 (18)0.0678 (6)
H13−0.66980.75520.25050.081*
C14−0.3935 (3)0.65252 (18)0.29709 (16)0.0592 (5)
H14−0.43320.63390.37030.071*
C150.8417 (4)0.11867 (19)0.50644 (16)0.0637 (5)
H15A0.81060.05710.47540.076*
H15B0.99040.15610.47460.076*
C160.8515 (3)0.07081 (16)0.62584 (15)0.0555 (5)
C170.6840 (4)−0.0071 (2)0.68695 (18)0.0715 (6)
H170.5632−0.03150.65360.086*
C180.6927 (4)−0.0493 (2)0.79649 (19)0.0817 (7)
H180.5787−0.10220.83640.098*
C190.8689 (4)−0.0138 (2)0.84739 (19)0.0757 (6)
H190.8743−0.04180.92150.091*
C201.0364 (4)0.0634 (2)0.78757 (19)0.0746 (6)
H201.15710.08720.82140.090*
C211.0283 (4)0.10629 (19)0.67754 (17)0.0641 (5)
H211.14230.15940.63800.077*
U11U22U33U12U13U23
S10.0688 (3)0.0641 (3)0.0475 (3)0.0269 (2)−0.0004 (2)−0.0098 (2)
O10.0647 (8)0.0623 (8)0.0502 (7)0.0208 (7)−0.0064 (6)−0.0145 (6)
O20.0995 (12)0.1023 (13)0.0475 (8)0.0567 (10)−0.0012 (7)−0.0103 (8)
C10.0607 (11)0.0530 (11)0.0481 (10)0.0107 (9)−0.0047 (8)−0.0106 (8)
C20.0601 (11)0.0465 (10)0.0469 (10)0.0058 (8)0.0000 (8)−0.0111 (8)
C30.0570 (11)0.0489 (10)0.0483 (10)0.0060 (8)0.0028 (8)−0.0136 (8)
C40.0660 (12)0.0638 (13)0.0567 (11)0.0154 (10)0.0050 (9)−0.0152 (9)
C50.0790 (15)0.0769 (15)0.0615 (13)0.0124 (12)0.0148 (10)−0.0229 (11)
C60.0987 (17)0.0748 (15)0.0450 (11)0.0102 (13)0.0089 (11)−0.0139 (10)
C70.0794 (14)0.0618 (13)0.0501 (11)0.0136 (11)−0.0039 (10)−0.0109 (9)
C80.0645 (12)0.0638 (12)0.0502 (11)0.0173 (10)−0.0028 (9)−0.0138 (9)
C90.0542 (10)0.0489 (10)0.0523 (10)0.0059 (8)−0.0050 (8)−0.0129 (8)
C100.0618 (12)0.0783 (15)0.0537 (11)0.0165 (11)−0.0007 (9)−0.0142 (10)
C110.0755 (14)0.0837 (16)0.0506 (11)0.0134 (12)−0.0052 (10)−0.0077 (10)
C120.0655 (13)0.0764 (15)0.0673 (14)0.0172 (11)−0.0186 (10)−0.0120 (11)
C130.0591 (12)0.0716 (14)0.0738 (14)0.0181 (10)−0.0061 (10)−0.0228 (11)
C140.0609 (12)0.0636 (12)0.0546 (11)0.0099 (10)−0.0031 (9)−0.0202 (9)
C150.0637 (12)0.0635 (12)0.0621 (12)0.0257 (10)−0.0048 (9)−0.0160 (10)
C160.0553 (11)0.0490 (10)0.0615 (12)0.0180 (9)−0.0052 (9)−0.0150 (9)
C170.0682 (13)0.0626 (13)0.0766 (15)0.0004 (11)−0.0176 (11)−0.0073 (11)
C180.0813 (16)0.0699 (15)0.0762 (16)−0.0043 (12)−0.0062 (12)0.0059 (12)
C190.0878 (17)0.0730 (15)0.0603 (13)0.0167 (13)−0.0134 (12)−0.0091 (11)
C200.0734 (15)0.0783 (16)0.0769 (15)0.0095 (12)−0.0201 (12)−0.0272 (13)
C210.0563 (12)0.0637 (13)0.0717 (14)0.0039 (10)−0.0022 (10)−0.0197 (10)
S1—C31.7623 (19)C10—H100.9300
S1—C151.8159 (18)C11—C121.368 (3)
O1—C11.331 (2)C11—H110.9300
O1—C81.444 (2)C12—C131.373 (3)
O2—C11.195 (2)C12—H120.9300
C1—C21.483 (3)C13—C141.382 (3)
C2—C71.390 (2)C13—H130.9300
C2—C31.410 (3)C14—H140.9300
C3—C41.405 (2)C15—C161.501 (3)
C4—C51.372 (3)C15—H15A0.9700
C4—H40.9300C15—H15B0.9700
C5—C61.371 (3)C16—C171.379 (3)
C5—H50.9300C16—C211.383 (3)
C6—C71.379 (3)C17—C181.375 (3)
C6—H60.9300C17—H170.9300
C7—H70.9300C18—C191.375 (3)
C8—C91.504 (2)C18—H180.9300
C8—H8A0.9700C19—C201.368 (3)
C8—H8B0.9700C19—H190.9300
C9—C101.380 (3)C20—C211.381 (3)
C9—C141.383 (3)C20—H200.9300
C10—C111.379 (3)C21—H210.9300
C3—S1—C15103.19 (9)C12—C11—H11119.7
C1—O1—C8116.17 (14)C10—C11—H11119.7
O2—C1—O1122.68 (18)C11—C12—C13119.5 (2)
O2—C1—C2124.83 (17)C11—C12—H12120.2
O1—C1—C2112.48 (16)C13—C12—H12120.2
C7—C2—C3119.66 (17)C12—C13—C14120.1 (2)
C7—C2—C1119.51 (17)C12—C13—H13120.0
C3—C2—C1120.82 (16)C14—C13—H13120.0
C4—C3—C2117.65 (17)C13—C14—C9120.71 (19)
C4—C3—S1121.64 (15)C13—C14—H14119.6
C2—C3—S1120.71 (14)C9—C14—H14119.6
C5—C4—C3121.03 (19)C16—C15—S1107.11 (13)
C5—C4—H4119.5C16—C15—H15A110.3
C3—C4—H4119.5S1—C15—H15A110.3
C6—C5—C4121.3 (2)C16—C15—H15B110.3
C6—C5—H5119.4S1—C15—H15B110.3
C4—C5—H5119.4H15A—C15—H15B108.5
C5—C6—C7118.9 (2)C17—C16—C21118.3 (2)
C5—C6—H6120.5C17—C16—C15121.5 (2)
C7—C6—H6120.5C21—C16—C15120.2 (2)
C6—C7—C2121.5 (2)C18—C17—C16121.0 (2)
C6—C7—H7119.3C18—C17—H17119.5
C2—C7—H7119.3C16—C17—H17119.5
O1—C8—C9108.69 (15)C19—C18—C17120.4 (2)
O1—C8—H8A110.0C19—C18—H18119.8
C9—C8—H8A110.0C17—C18—H18119.8
O1—C8—H8B110.0C20—C19—C18119.1 (2)
C9—C8—H8B110.0C20—C19—H19120.4
H8A—C8—H8B108.3C18—C19—H19120.4
C10—C9—C14118.49 (17)C19—C20—C21120.8 (2)
C10—C9—C8123.42 (17)C19—C20—H20119.6
C14—C9—C8118.09 (17)C21—C20—H20119.6
C11—C10—C9120.55 (19)C20—C21—C16120.4 (2)
C11—C10—H10119.7C20—C21—H21119.8
C9—C10—H10119.7C16—C21—H21119.8
C12—C11—C10120.6 (2)
D—H···AD—HH···AD···AD—H···A
C14—H14···O2i0.932.633.408 (3)142
C4—H4···Cg3ii0.933.113.846 (3)137
C13—H13···Cg3i0.932.883.653 (3)141
C18—H18···Cg1iii0.933.203.820 (3)126
C20—H20···Cg2iv0.932.963.651 (3)132
Table 1

Geometry of hydrogen bonds and weak C—H⋯π interactions (Å, °)

Cg1, Cg2 and Cg3 are the centroids of the C2–C7, C9–C14 and C16–C21 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C14—H14⋯O2i 0.932.633.408 (3)142
C4—H4⋯Cg3ii 0.933.113.846 (3)137
C13—H13⋯Cg3i 0.932.883.653 (3)141
C18—H18⋯Cg1iii 0.933.203.820 (3)126
C20—H20⋯Cg2iv 0.932.963.651 (3)132

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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