Literature DB >> 23424517

2-(1H-Imidazol-1-yl)-4-[3-(trifluoro-meth-yl)phen-yl]-1,3-thia-zole.

Konstantin V Kudryavtsev1, Andrei V Churakov, Jih-Hwa Guh.   

Abstract

The title compound, C(13)H(8)F(3)N(3)S, consists of three linked aromatic rings. The whole mol-ecule (except for the three F atoms) is planar to within 0.225 (2) Å. In the crystal, adjacent mol-ecules are linked into chains along the ac diagonal by weak C-H⋯N inter-actions.

Entities:  

Year:  2013        PMID: 23424517      PMCID: PMC3569771          DOI: 10.1107/S1600536813000615

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the synthesis of imidazolo­thia­zoles by copper-catalysed coupling, see: Zhu et al. (2007 ▶).

Experimental

Crystal data

C13H8F3N3S M = 295.28 Monoclinic, a = 8.4152 (7) Å b = 19.2403 (15) Å c = 8.4105 (7) Å β = 114.210 (1)° V = 1241.98 (18) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 150 K 0.40 × 0.20 × 0.10 mm

Data collection

Bruker SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.893, T max = 0.972 9797 measured reflections 2716 independent reflections 2164 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.103 S = 1.07 2716 reflections 213 parameters All H-atom parameters refined Δρmax = 0.27 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813000615/ff2095sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813000615/ff2095Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813000615/ff2095Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H8F3N3SF(000) = 600
Mr = 295.28Dx = 1.579 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1717 reflections
a = 8.4152 (7) Åθ = 3.1–24.5°
b = 19.2403 (15) ŵ = 0.29 mm1
c = 8.4105 (7) ÅT = 150 K
β = 114.210 (1)°Block, colourless
V = 1241.98 (18) Å30.40 × 0.20 × 0.10 mm
Z = 4
Bruker SMART APEXII diffractometer2716 independent reflections
Radiation source: fine-focus sealed tube2164 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.049
ω scansθmax = 27.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −10→9
Tmin = 0.893, Tmax = 0.972k = −24→24
9797 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: difference Fourier map
wR(F2) = 0.103All H-atom parameters refined
S = 1.07w = 1/[σ2(Fo2) + (0.0429P)2 + 0.2754P] where P = (Fo2 + 2Fc2)/3
2716 reflections(Δ/σ)max < 0.001
213 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.22949 (6)0.55985 (2)0.40649 (6)0.02492 (15)
N10.0577 (2)0.44567 (7)0.36963 (19)0.0214 (3)
N2−0.0844 (2)0.52744 (7)0.14612 (18)0.0207 (3)
N3−0.3431 (2)0.52646 (9)−0.0761 (2)0.0306 (4)
F10.62622 (19)0.32402 (8)1.15343 (17)0.0571 (4)
F20.64762 (19)0.22590 (6)1.0452 (2)0.0571 (4)
F30.74065 (16)0.31841 (7)0.97113 (19)0.0530 (4)
C10.2432 (2)0.37530 (9)0.6250 (2)0.0215 (4)
C20.4056 (3)0.36375 (10)0.7611 (2)0.0234 (4)
C30.4358 (3)0.30371 (9)0.8600 (2)0.0250 (4)
C40.3055 (3)0.25486 (10)0.8277 (3)0.0277 (4)
C50.1440 (3)0.26582 (10)0.6924 (3)0.0288 (5)
C60.1129 (3)0.32528 (10)0.5908 (3)0.0256 (4)
C70.6105 (3)0.29265 (10)1.0058 (3)0.0331 (5)
C80.2102 (2)0.43953 (9)0.5201 (2)0.0204 (4)
C90.3176 (3)0.49573 (9)0.5588 (2)0.0240 (4)
C100.0540 (2)0.50577 (9)0.2999 (2)0.0205 (4)
C11−0.2399 (3)0.49374 (10)0.0647 (2)0.0285 (5)
C12−0.2503 (3)0.58436 (11)−0.0854 (3)0.0286 (4)
C13−0.0922 (3)0.58620 (10)0.0485 (2)0.0266 (4)
H90.425 (3)0.5042 (10)0.656 (3)0.028 (5)*
H60.004 (3)0.3331 (10)0.496 (3)0.028 (5)*
H20.489 (3)0.3964 (11)0.783 (3)0.031 (6)*
H11−0.263 (3)0.4517 (11)0.113 (3)0.035 (6)*
H50.053 (3)0.2292 (11)0.670 (3)0.040 (6)*
H40.328 (3)0.2144 (11)0.900 (3)0.037 (6)*
H12−0.298 (3)0.6159 (12)−0.176 (3)0.043 (7)*
H130.002 (3)0.6192 (12)0.080 (3)0.044 (7)*
U11U22U33U12U13U23
S10.0198 (3)0.0248 (2)0.0255 (3)−0.00220 (19)0.00454 (19)0.00161 (18)
N10.0189 (8)0.0255 (8)0.0196 (8)0.0012 (6)0.0077 (6)−0.0024 (6)
N20.0192 (8)0.0238 (7)0.0172 (7)0.0011 (6)0.0055 (6)−0.0012 (6)
N30.0268 (9)0.0364 (9)0.0214 (8)−0.0014 (7)0.0028 (7)0.0014 (7)
F10.0494 (9)0.0731 (10)0.0318 (7)0.0124 (8)−0.0007 (6)−0.0037 (7)
F20.0446 (9)0.0321 (7)0.0713 (10)0.0094 (6)0.0003 (7)0.0201 (6)
F30.0223 (7)0.0689 (10)0.0589 (9)0.0053 (6)0.0076 (6)0.0279 (7)
C10.0230 (10)0.0223 (9)0.0209 (9)0.0020 (7)0.0107 (8)−0.0022 (7)
C20.0210 (10)0.0251 (9)0.0244 (10)0.0001 (8)0.0096 (8)−0.0013 (7)
C30.0256 (11)0.0233 (9)0.0250 (10)0.0028 (8)0.0094 (8)0.0007 (7)
C40.0315 (11)0.0222 (9)0.0319 (11)0.0007 (8)0.0155 (9)0.0025 (8)
C50.0257 (11)0.0260 (10)0.0361 (11)−0.0043 (8)0.0142 (9)−0.0040 (8)
C60.0214 (10)0.0273 (10)0.0270 (10)−0.0003 (8)0.0088 (8)−0.0046 (8)
C70.0315 (12)0.0276 (10)0.0357 (12)0.0029 (9)0.0092 (9)0.0084 (8)
C80.0176 (9)0.0250 (9)0.0186 (9)0.0028 (7)0.0074 (7)−0.0018 (7)
C90.0198 (10)0.0267 (10)0.0229 (9)0.0014 (8)0.0059 (8)0.0008 (7)
C100.0179 (9)0.0257 (9)0.0176 (9)0.0005 (7)0.0068 (7)−0.0029 (7)
C110.0274 (11)0.0297 (10)0.0220 (10)−0.0044 (8)0.0037 (8)−0.0012 (8)
C120.0307 (11)0.0316 (10)0.0224 (10)0.0043 (9)0.0099 (8)0.0034 (8)
C130.0259 (11)0.0282 (10)0.0255 (10)−0.0005 (8)0.0104 (8)0.0036 (8)
S1—C91.7128 (19)C2—C31.385 (3)
S1—C101.7266 (18)C2—H20.90 (2)
N1—C101.291 (2)C3—C41.384 (3)
N1—C81.390 (2)C3—C71.494 (3)
N2—C111.367 (2)C4—C51.385 (3)
N2—C131.383 (2)C4—H40.96 (2)
N2—C101.403 (2)C5—C61.387 (3)
N3—C111.307 (2)C5—H51.00 (2)
N3—C121.381 (3)C6—H60.95 (2)
F1—C71.337 (3)C8—C91.360 (3)
F2—C71.331 (2)C9—H90.95 (2)
F3—C71.339 (3)C11—H110.96 (2)
C1—C21.394 (3)C12—C131.346 (3)
C1—C61.397 (3)C12—H120.93 (2)
C1—C81.477 (2)C13—H130.96 (2)
C9—S1—C1088.27 (9)F2—C7—F1106.30 (17)
C10—N1—C8109.34 (15)F2—C7—F3106.36 (18)
C11—N2—C13106.72 (15)F1—C7—F3104.87 (18)
C11—N2—C10125.71 (16)F2—C7—C3113.16 (17)
C13—N2—C10127.57 (16)F1—C7—C3112.79 (18)
C11—N3—C12105.01 (17)F3—C7—C3112.71 (17)
C2—C1—C6118.77 (17)C9—C8—N1115.14 (16)
C2—C1—C8120.30 (17)C9—C8—C1125.36 (16)
C6—C1—C8120.93 (17)N1—C8—C1119.50 (16)
C3—C2—C1120.20 (18)C8—C9—S1110.65 (14)
C3—C2—H2121.4 (13)C8—C9—H9130.2 (12)
C1—C2—H2118.4 (13)S1—C9—H9119.0 (12)
C4—C3—C2120.85 (18)N1—C10—N2122.77 (16)
C4—C3—C7119.88 (17)N1—C10—S1116.59 (13)
C2—C3—C7119.25 (17)N2—C10—S1120.64 (13)
C3—C4—C5119.30 (18)N3—C11—N2111.68 (18)
C3—C4—H4119.6 (14)N3—C11—H11128.1 (13)
C5—C4—H4121.1 (14)N2—C11—H11120.2 (13)
C4—C5—C6120.36 (19)C13—C12—N3111.19 (17)
C4—C5—H5117.8 (13)C13—C12—H12128.0 (14)
C6—C5—H5121.8 (13)N3—C12—H12120.8 (14)
C5—C6—C1120.50 (18)C12—C13—N2105.38 (17)
C5—C6—H6121.5 (12)C12—C13—H13131.8 (14)
C1—C6—H6118.0 (12)N2—C13—H13122.8 (14)
C6—C1—C2—C3−0.1 (3)C2—C1—C8—N1170.46 (17)
C8—C1—C2—C3179.52 (17)C6—C1—C8—N1−9.9 (3)
C1—C2—C3—C4−1.0 (3)N1—C8—C9—S10.5 (2)
C1—C2—C3—C7−179.66 (18)C1—C8—C9—S1−178.79 (15)
C2—C3—C4—C51.2 (3)C10—S1—C9—C8−0.46 (15)
C7—C3—C4—C5179.87 (19)C8—N1—C10—N2−179.81 (16)
C3—C4—C5—C6−0.3 (3)C8—N1—C10—S1−0.2 (2)
C4—C5—C6—C1−0.8 (3)C11—N2—C10—N19.5 (3)
C2—C1—C6—C51.0 (3)C13—N2—C10—N1−171.01 (18)
C8—C1—C6—C5−178.61 (18)C11—N2—C10—S1−170.05 (15)
C4—C3—C7—F226.1 (3)C13—N2—C10—S19.4 (3)
C2—C3—C7—F2−155.26 (19)C9—S1—C10—N10.41 (16)
C4—C3—C7—F1−94.6 (2)C9—S1—C10—N2180.00 (16)
C2—C3—C7—F184.0 (2)C12—N3—C11—N2−0.4 (2)
C4—C3—C7—F3146.84 (19)C13—N2—C11—N30.4 (2)
C2—C3—C7—F3−34.5 (3)C10—N2—C11—N3180.00 (17)
C10—N1—C8—C9−0.2 (2)C11—N3—C12—C130.2 (2)
C10—N1—C8—C1179.13 (16)N3—C12—C13—N20.0 (2)
C2—C1—C8—C9−10.3 (3)C11—N2—C13—C12−0.3 (2)
C6—C1—C8—C9169.30 (18)C10—N2—C13—C12−179.81 (18)
D—H···AD—HH···AD···AD—H···A
C9—H9···N3i0.95 (2)2.34 (2)3.278 (2)169.4 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C9—H9⋯N3i 0.95 (2)2.34 (2)3.278 (2)169.4 (18)

Symmetry code: (i) .

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