Literature DB >> 23424427

Di-μ-thio-semicarbazide-κ(4)S:S-bis-[chlori-dobis(triphenyl-phosphane-κP)silver(I)].

Yupa Wattanakanjana1, Chaveng Pakawatchai, Ruthairat Nimthong.   

Abstract

The dinuclear title complex, [Ag(2)Cl(2)(CH(5)N(3)S)(2)(C(18)H(15)P)(2)], lies across an inversion center. The Ag(I) ion exhibits a slightly distorted tetra-hedral coordination geometry formed by a P atom from a triphenyl-phosphane ligand, two metal-bridging S atoms from thio-semicabazide ligands and one chloride ion. The S atoms bridge two symmetry-related Ag(I) ions, forming a strictly planar Ag(2)S(2) core with an Ag⋯Ag separation of 2.7802 (7) Å. There is an intra-molecular N-H⋯Cl hydrogen bond. In the crystal, N-H⋯Cl and N-H⋯S hydrogen bonds link complex mol-ecules, forming layers parallel to (001). These layers are connected through π-π stacking inter-actions [centroid-centroid distance = 3.665 (2) Å], leading to the formation of a three-dimensional network.

Entities:  

Year:  2013        PMID: 23424427      PMCID: PMC3569183          DOI: 10.1107/S1600536812051562

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal(I) complexes of phosphine ligands as precursors for the preparation of mixed-ligand complexes, see: Ferrari et al. (2007 ▶); Pakawatchai et al. (2012 ▶). For potential applications of thio­semicarbazide derivatives and their metal complexes, see: Pandeya et al. (1999 ▶); Wujec et al. (2009 ▶); Mohareb & Mohamed (2012 ▶); He et al. (2012 ▶). For examples of related discrete complexes, see: Wattanakanjana et al. (2012 ▶); Lobana et al. (2008 ▶).

Experimental

Crystal data

[Ag2Cl2(CH5N3S)2(C18H15P)2] M = 993.46 Triclinic, a = 8.7845 (4) Å b = 9.4656 (4) Å c = 13.7529 (6) Å α = 109.276 (1)° β = 98.306 (1)° γ = 99.739 (1)° V = 1038.94 (8) Å3 Z = 1 Mo Kα radiation μ = 1.28 mm−1 T = 293 K 0.38 × 0.30 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.638, T max = 0.880 14302 measured reflections 5026 independent reflections 4627 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.069 S = 1.06 5026 reflections 251 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.38 e Å−3 Δρmin = −0.55 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812051562/lh5573sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812051562/lh5573Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag2Cl2(CH5N3S)2(C18H15P)2]Z = 1
Mr = 993.46F(000) = 500
Triclinic, P1Dx = 1.588 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.7845 (4) ÅCell parameters from 9010 reflections
b = 9.4656 (4) Åθ = 2.3–28.0°
c = 13.7529 (6) ŵ = 1.28 mm1
α = 109.276 (1)°T = 293 K
β = 98.306 (1)°Block, colorless
γ = 99.739 (1)°0.38 × 0.30 × 0.10 mm
V = 1038.94 (8) Å3
Bruker SMART CCD diffractometer5026 independent reflections
Radiation source: fine-focus sealed tube4627 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.036
Full–matrix least–squares on F2 scansθmax = 28.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −11→11
Tmin = 0.638, Tmax = 0.880k = −12→12
14302 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.069w = 1/[σ2(Fo2) + (0.0293P)2 + 0.2733P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.003
5026 reflectionsΔρmax = 0.38 e Å3
251 parametersΔρmin = −0.55 e Å3
5 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0693 (18)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.71808 (17)1.20926 (18)0.50782 (12)0.0350 (3)
C111.16762 (18)0.7721 (2)0.21780 (12)0.0418 (3)
C121.2004 (2)0.6279 (3)0.18680 (16)0.0564 (5)
H121.11940.54030.16750.068*
C131.3557 (3)0.6145 (3)0.18463 (19)0.0701 (6)
H131.37810.51770.16350.084*
C141.4747 (3)0.7429 (4)0.21342 (19)0.0712 (7)
H141.57780.73300.21110.085*
C151.4436 (2)0.8871 (3)0.24596 (17)0.0628 (6)
H151.52550.97410.26570.075*
C161.2904 (2)0.9025 (2)0.24935 (14)0.0481 (4)
H161.26950.99990.27270.058*
C210.84762 (18)0.61752 (19)0.20371 (13)0.0404 (3)
C220.7696 (2)0.5083 (2)0.10569 (15)0.0546 (4)
H220.77940.52840.04480.065*
C230.6776 (3)0.3701 (3)0.09818 (19)0.0678 (6)
H230.62570.29770.03220.081*
C240.6619 (3)0.3386 (3)0.1867 (2)0.0732 (6)
H240.60230.24390.18090.088*
C250.7351 (3)0.4481 (3)0.2851 (2)0.0789 (7)
H250.72280.42760.34560.095*
C260.8265 (3)0.5878 (3)0.29402 (17)0.0619 (5)
H260.87370.66180.36030.074*
C310.90601 (19)0.8272 (2)0.09696 (15)0.0447 (4)
C320.9697 (3)0.7705 (2)0.00965 (15)0.0562 (4)
H321.05250.72200.01470.067*
C330.9124 (3)0.7846 (3)−0.08519 (19)0.0758 (7)
H330.95640.7463−0.14330.091*
C340.7892 (4)0.8561 (4)−0.0922 (3)0.0916 (10)
H340.74830.8642−0.15590.110*
C350.7272 (3)0.9150 (4)−0.0065 (3)0.0931 (10)
H350.64490.9639−0.01210.112*
C360.7850 (2)0.9031 (3)0.0888 (2)0.0666 (6)
H360.74320.94570.14720.080*
N10.82011 (18)1.32995 (18)0.51108 (14)0.0474 (3)
N20.57728 (17)1.22460 (17)0.52697 (14)0.0478 (3)
N30.5365 (2)1.3672 (2)0.54628 (19)0.0609 (5)
P10.96967 (5)0.80383 (5)0.22142 (3)0.03895 (10)
S10.75685 (4)1.02919 (4)0.47995 (3)0.03889 (10)
Cl11.13857 (6)1.28186 (5)0.41121 (4)0.05418 (12)
Ag10.977789 (17)1.016088 (15)0.381354 (12)0.05737 (8)
H1A0.912 (2)1.320 (3)0.4929 (19)0.069*
H1B0.797 (3)1.417 (2)0.530 (2)0.069*
H20.518 (3)1.146 (2)0.526 (2)0.069*
H3A0.528 (3)1.404 (3)0.6102 (14)0.069*
H3B0.443 (2)1.349 (3)0.5070 (18)0.069*
U11U22U33U12U13U23
C10.0332 (7)0.0382 (7)0.0346 (7)0.0098 (6)0.0061 (5)0.0142 (6)
C110.0328 (7)0.0549 (10)0.0334 (7)0.0156 (7)0.0070 (6)0.0082 (7)
C120.0476 (10)0.0577 (11)0.0546 (10)0.0222 (9)0.0088 (8)0.0047 (9)
C130.0606 (13)0.0856 (17)0.0659 (13)0.0444 (13)0.0159 (10)0.0154 (12)
C140.0395 (10)0.116 (2)0.0689 (13)0.0367 (12)0.0176 (9)0.0363 (14)
C150.0352 (9)0.0982 (17)0.0597 (12)0.0118 (10)0.0102 (8)0.0366 (12)
C160.0377 (8)0.0630 (11)0.0454 (9)0.0119 (8)0.0088 (7)0.0218 (8)
C210.0336 (7)0.0431 (8)0.0419 (8)0.0124 (6)0.0080 (6)0.0107 (7)
C220.0610 (11)0.0483 (10)0.0432 (9)0.0011 (8)0.0152 (8)0.0063 (8)
C230.0743 (14)0.0492 (11)0.0610 (12)−0.0057 (10)0.0126 (11)0.0063 (9)
C240.0709 (14)0.0592 (13)0.0896 (17)0.0004 (11)0.0118 (12)0.0368 (13)
C250.0872 (17)0.0848 (17)0.0714 (15)0.0060 (14)0.0063 (13)0.0483 (14)
C260.0638 (12)0.0692 (13)0.0483 (10)0.0083 (10)−0.0014 (9)0.0249 (10)
C310.0343 (7)0.0401 (8)0.0552 (10)0.0030 (6)0.0044 (7)0.0166 (7)
C320.0637 (12)0.0529 (11)0.0468 (10)0.0099 (9)0.0097 (8)0.0141 (8)
C330.0969 (19)0.0617 (13)0.0547 (12)−0.0107 (13)0.0015 (12)0.0234 (11)
C340.0875 (19)0.0859 (19)0.097 (2)−0.0152 (15)−0.0220 (16)0.0621 (18)
C350.0588 (14)0.100 (2)0.138 (3)0.0163 (14)−0.0038 (16)0.078 (2)
C360.0438 (10)0.0688 (13)0.1000 (17)0.0183 (9)0.0158 (11)0.0442 (13)
N10.0388 (7)0.0386 (7)0.0699 (10)0.0106 (6)0.0169 (7)0.0230 (7)
N20.0372 (7)0.0396 (7)0.0729 (10)0.0145 (6)0.0200 (7)0.0226 (7)
N30.0468 (9)0.0477 (9)0.0920 (14)0.0236 (7)0.0164 (9)0.0234 (9)
P10.03125 (19)0.0388 (2)0.0393 (2)0.00988 (15)0.00878 (15)0.00323 (16)
S10.03454 (18)0.03454 (19)0.0490 (2)0.01021 (14)0.01279 (15)0.01437 (16)
Cl10.0497 (2)0.0406 (2)0.0713 (3)0.00658 (17)0.0195 (2)0.0183 (2)
Ag10.05604 (11)0.04168 (10)0.06025 (12)0.00514 (6)0.02583 (7)−0.00213 (7)
C1—N11.311 (2)C25—H250.9300
C1—N21.323 (2)C26—H260.9300
C1—S11.7236 (16)C31—C321.383 (3)
C11—C121.383 (3)C31—C361.391 (3)
C11—C161.391 (3)C31—P11.8184 (18)
C11—P11.8189 (16)C32—C331.386 (3)
C12—C131.394 (3)C32—H320.9300
C12—H120.9300C33—C341.377 (4)
C13—C141.364 (4)C33—H330.9300
C13—H130.9300C34—C351.360 (5)
C14—C151.377 (4)C34—H340.9300
C14—H140.9300C35—C361.383 (4)
C15—C161.384 (3)C35—H350.9300
C15—H150.9300C36—H360.9300
C16—H160.9300N1—H1A0.888 (16)
C21—C221.389 (2)N1—H1B0.851 (17)
C21—C261.391 (3)N2—N31.406 (2)
C21—P11.8221 (18)N2—H20.834 (16)
C22—C231.381 (3)N3—H3A0.851 (16)
C22—H220.9300N3—H3B0.870 (16)
C23—C241.366 (4)P1—Ag12.4225 (4)
C23—H230.9300S1—Ag12.5202 (4)
C24—C251.384 (4)Cl1—Ag12.5378 (5)
C24—H240.9300Ag1—Ag1i3.3502 (4)
C25—C261.383 (3)
N1—C1—N2119.02 (15)C32—C31—P1123.22 (14)
N1—C1—S1123.57 (12)C36—C31—P1118.21 (17)
N2—C1—S1117.41 (12)C31—C32—C33121.2 (2)
C12—C11—C16119.68 (16)C31—C32—H32119.4
C12—C11—P1123.64 (15)C33—C32—H32119.4
C16—C11—P1116.68 (13)C34—C33—C32119.1 (3)
C11—C12—C13119.7 (2)C34—C33—H33120.5
C11—C12—H12120.2C32—C33—H33120.5
C13—C12—H12120.2C35—C34—C33120.4 (2)
C14—C13—C12120.2 (2)C35—C34—H34119.8
C14—C13—H13119.9C33—C34—H34119.8
C12—C13—H13119.9C34—C35—C36120.9 (3)
C13—C14—C15120.57 (19)C34—C35—H35119.6
C13—C14—H14119.7C36—C35—H35119.6
C15—C14—H14119.7C35—C36—C31119.8 (3)
C14—C15—C16120.0 (2)C35—C36—H36120.1
C14—C15—H15120.0C31—C36—H36120.1
C16—C15—H15120.0C1—N1—H1A120.0 (17)
C15—C16—C11119.9 (2)C1—N1—H1B119.0 (18)
C15—C16—H16120.1H1A—N1—H1B121 (2)
C11—C16—H16120.1C1—N2—N3120.06 (15)
C22—C21—C26118.97 (18)C1—N2—H2115.7 (18)
C22—C21—P1123.40 (14)N3—N2—H2124.3 (19)
C26—C21—P1117.55 (14)N2—N3—H3A109.2 (19)
C23—C22—C21120.31 (19)N2—N3—H3B106.8 (18)
C23—C22—H22119.8H3A—N3—H3B107 (2)
C21—C22—H22119.8C31—P1—C11103.77 (8)
C24—C23—C22120.6 (2)C31—P1—C21103.33 (8)
C24—C23—H23119.7C11—P1—C21105.00 (8)
C22—C23—H23119.7C31—P1—Ag1117.05 (6)
C23—C24—C25119.7 (2)C11—P1—Ag1109.59 (5)
C23—C24—H24120.1C21—P1—Ag1116.71 (6)
C25—C24—H24120.1C1—S1—Ag1108.17 (5)
C26—C25—C24120.3 (2)P1—Ag1—S1123.445 (15)
C26—C25—H25119.8P1—Ag1—Cl1119.164 (17)
C24—C25—H25119.8S1—Ag1—Cl1111.851 (15)
C25—C26—C21120.0 (2)P1—Ag1—Ag1i122.531 (13)
C25—C26—H26120.0S1—Ag1—Ag1i58.885 (10)
C21—C26—H26120.0Cl1—Ag1—Ag1i105.880 (14)
C32—C31—C36118.6 (2)
C16—C11—C12—C13−1.8 (3)C36—C31—P1—C2191.93 (16)
P1—C11—C12—C13178.80 (17)C32—C31—P1—Ag1143.54 (15)
C11—C12—C13—C140.3 (4)C36—C31—P1—Ag1−37.84 (17)
C12—C13—C14—C150.7 (4)C12—C11—P1—C31−96.91 (17)
C13—C14—C15—C16−0.2 (3)C16—C11—P1—C3183.68 (14)
C14—C15—C16—C11−1.3 (3)C12—C11—P1—C2111.23 (18)
C12—C11—C16—C152.3 (3)C16—C11—P1—C21−168.18 (13)
P1—C11—C16—C15−178.27 (14)C12—C11—P1—Ag1137.34 (15)
C26—C21—C22—C23−2.5 (3)C16—C11—P1—Ag1−42.07 (14)
P1—C21—C22—C23−179.27 (18)C22—C21—P1—C3118.41 (17)
C21—C22—C23—C240.0 (4)C26—C21—P1—C31−158.39 (15)
C22—C23—C24—C252.0 (4)C22—C21—P1—C11−90.05 (16)
C23—C24—C25—C26−1.3 (5)C26—C21—P1—C1193.14 (16)
C24—C25—C26—C21−1.3 (4)C22—C21—P1—Ag1148.38 (14)
C22—C21—C26—C253.1 (3)C26—C21—P1—Ag1−28.42 (16)
P1—C21—C26—C25−179.9 (2)N1—C1—S1—Ag1−21.93 (16)
C36—C31—C32—C33−1.7 (3)N2—C1—S1—Ag1158.21 (12)
P1—C31—C32—C33176.89 (16)C31—P1—Ag1—S196.31 (6)
C31—C32—C33—C34−0.2 (3)C11—P1—Ag1—S1−145.95 (6)
C32—C33—C34—C351.4 (4)C21—P1—Ag1—S1−26.83 (6)
C33—C34—C35—C36−0.7 (4)C31—P1—Ag1—Cl1−55.26 (7)
C34—C35—C36—C31−1.3 (4)C11—P1—Ag1—Cl162.48 (7)
C32—C31—C36—C352.5 (3)C21—P1—Ag1—Cl1−178.40 (6)
P1—C31—C36—C35−176.20 (19)C31—P1—Ag1—Ag1i168.06 (6)
N1—C1—N2—N32.5 (3)C11—P1—Ag1—Ag1i−74.21 (7)
S1—C1—N2—N3−177.61 (15)C21—P1—Ag1—Ag1i44.92 (6)
C32—C31—P1—C1122.69 (18)C1—S1—Ag1—P1−132.43 (5)
C36—C31—P1—C11−158.69 (16)C1—S1—Ag1—Cl120.96 (6)
C32—C31—P1—C21−86.69 (17)C1—S1—Ag1—Ag1i116.84 (5)
D—H···AD—HH···AD···AD—H···A
N3—H3B···Cl1ii0.87 (2)2.67 (2)3.535 (2)171 (2)
N2—H2···S1iii0.83 (2)2.66 (2)3.4320 (15)155 (2)
N1—H1B···Cl1iv0.85 (2)2.63 (2)3.4088 (16)154 (2)
N1—H1A···Cl10.89 (2)2.45 (2)3.3239 (16)170 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3B⋯Cl1i 0.87 (2)2.67 (2)3.535 (2)171 (2)
N2—H2⋯S1ii 0.83 (2)2.66 (2)3.4320 (15)155 (2)
N1—H1B⋯Cl1iii 0.85 (2)2.63 (2)3.4088 (16)154 (2)
N1—H1A⋯Cl10.89 (2)2.45 (2)3.3239 (16)170 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  Synthesis, antibacterial, antifungal and anti-HIV activities of Schiff and Mannich bases derived from isatin derivatives and N-[4-(4'-chlorophenyl)thiazol-2-yl] thiosemicarbazide.

Authors:  S N Pandeya; D Sriram; G Nath; E DeClercq
Journal:  Eur J Pharm Sci       Date:  1999-10       Impact factor: 4.384

2.  Synthesis and antitumor activity of novel quinazoline derivatives containing thiosemicarbazide moiety.

Authors:  Junbo He; Xiaoguo Wang; Xiaoqin Zhao; Yongju Liang; Hongwu He; Liwu Fu
Journal:  Eur J Med Chem       Date:  2012-06-12       Impact factor: 6.514

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Synthesis, lipophilicity and antimicrobial activity of new derivatives of thiosemicarbazides and 1,2,4-triazoline-5-thione.

Authors:  Monika Wujec; Joanna Stefańska; Agata Siwek; Małgorzata Tatarczak
Journal:  Acta Pol Pharm       Date:  2009 Jan-Feb       Impact factor: 0.330

5.  (1-Acetyl-thio-urea-κS)bromido-bis(triphenyl-phosphane-κP)silver(I).

Authors:  Chaveng Pakawatchai; Piyapong Jantaramas; Jedsada Mokhagul; Ruthairat Nimthong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-17

6.  Bis(μ-4,6-dimethyl-pyrimidine-2-thiol-ato)-κ(3) N,S:S;κ(3) S:N,S-bis-[(triphenyl-phosphane-κP)silver(I)].

Authors:  Yupa Wattanakanjana; Chaveng Pakawatchai; Sukanya Kowittheeraphong; Ruthairat Nimthong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-30
  6 in total
  2 in total

1.  Crystal structure of bis-[μ-bis-(di-phenyl-phosphan-yl)methane-κ(2) P:P']-μ-chlorido-chlorido-1κCl-(1-phenyl-thio-urea-2κS)disilver aceto-nitrile hemisolvate.

Authors:  Arunpatcha Nimthong-Roldán; Janejira Ratthiwal; Yupa Wattanakanjana
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-05-23

2.  Di-aqua-{μ2-N,N'-bis-[(cyclo-hexa-nyl-idene)amino]-oxamide}-bis-(tri-phenyl-phosphane)silver(I) dinitrate.

Authors:  Ruthairat Nimthong; Nattakunya Thepsena; Walailak Puetpaiboon; Yupa Wattanakanjana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-04
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.